MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Carnobacterium sp. 17-4 plasmid pCAR50

Total Repeats: 179

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_015390	AGT	2	6	42	47	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
2	NC_015390	AGG	2	6	1554	1559	33.33 %	0 %	66.67 %	0 %	Non-Coding
3	NC_015390	TTC	2	6	2309	2314	0 %	66.67 %	0 %	33.33 %	Non-Coding
4	NC_015390	ACA	2	6	2466	2471	66.67 %	0 %	0 %	33.33 %	Non-Coding
5	NC_015390	ATA	2	6	2546	2551	66.67 %	33.33 %	0 %	0 %	Non-Coding
6	NC_015390	AGA	2	6	2616	2621	66.67 %	0 %	33.33 %	0 %	Non-Coding
7	NC_015390	AAT	2	6	3438	3443	66.67 %	33.33 %	0 %	0 %	Non-Coding
8	NC_015390	GAA	2	6	3459	3464	66.67 %	0 %	33.33 %	0 %	Non-Coding
9	NC_015390	ATA	2	6	3482	3487	66.67 %	33.33 %	0 %	0 %	Non-Coding
10	NC_015390	AGG	2	6	3579	3584	33.33 %	0 %	66.67 %	0 %	Non-Coding
11	NC_015390	TAA	2	6	5454	5459	66.67 %	33.33 %	0 %	0 %	Non-Coding
12	NC_015390	AGG	2	6	6351	6356	33.33 %	0 %	66.67 %	0 %	Non-Coding
13	NC_015390	TAT	2	6	8289	8294	33.33 %	66.67 %	0 %	0 %	Non-Coding
14	NC_015390	AGA	3	9	8315	8323	66.67 %	0 %	33.33 %	0 %	Non-Coding
15	NC_015390	GTA	2	6	8396	8401	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
16	NC_015390	TTA	2	6	8402	8407	33.33 %	66.67 %	0 %	0 %	Non-Coding
17	NC_015390	GAA	2	6	8412	8417	66.67 %	0 %	33.33 %	0 %	Non-Coding
18	NC_015390	TAA	2	6	8424	8429	66.67 %	33.33 %	0 %	0 %	Non-Coding
19	NC_015390	TAC	2	6	8430	8435	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
20	NC_015390	TAA	2	6	8555	8560	66.67 %	33.33 %	0 %	0 %	Non-Coding
21	NC_015390	GAT	2	6	8629	8634	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
22	NC_015390	TTA	2	6	9000	9005	33.33 %	66.67 %	0 %	0 %	Non-Coding
23	NC_015390	TGA	2	6	9009	9014	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
24	NC_015390	AGA	2	6	13515	13520	66.67 %	0 %	33.33 %	0 %	Non-Coding
25	NC_015390	CTA	2	6	14521	14526	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
26	NC_015390	AAG	2	6	14741	14746	66.67 %	0 %	33.33 %	0 %	Non-Coding
27	NC_015390	TAA	2	6	14785	14790	66.67 %	33.33 %	0 %	0 %	Non-Coding
28	NC_015390	CAT	2	6	14797	14802	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
29	NC_015390	ATT	2	6	14836	14841	33.33 %	66.67 %	0 %	0 %	Non-Coding
30	NC_015390	GCT	2	6	14915	14920	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
31	NC_015390	AAT	2	6	15002	15007	66.67 %	33.33 %	0 %	0 %	Non-Coding
32	NC_015390	AGG	2	6	15042	15047	33.33 %	0 %	66.67 %	0 %	Non-Coding
33	NC_015390	TAA	2	6	15063	15068	66.67 %	33.33 %	0 %	0 %	Non-Coding
34	NC_015390	TTC	2	6	15214	15219	0 %	66.67 %	0 %	33.33 %	Non-Coding
35	NC_015390	TCC	2	6	17646	17651	0 %	33.33 %	0 %	66.67 %	Non-Coding
36	NC_015390	TAC	2	6	19601	19606	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
37	NC_015390	AGG	2	6	19663	19668	33.33 %	0 %	66.67 %	0 %	Non-Coding
38	NC_015390	TCA	2	6	19721	19726	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
39	NC_015390	AGA	2	6	19769	19774	66.67 %	0 %	33.33 %	0 %	Non-Coding
40	NC_015390	TAT	2	6	19815	19820	33.33 %	66.67 %	0 %	0 %	Non-Coding
41	NC_015390	ATT	2	6	19870	19875	33.33 %	66.67 %	0 %	0 %	Non-Coding
42	NC_015390	AAT	2	6	19917	19922	66.67 %	33.33 %	0 %	0 %	Non-Coding
43	NC_015390	TAA	2	6	20016	20021	66.67 %	33.33 %	0 %	0 %	Non-Coding
44	NC_015390	GTT	2	6	20258	20263	0 %	66.67 %	33.33 %	0 %	Non-Coding
45	NC_015390	AAT	2	6	20266	20271	66.67 %	33.33 %	0 %	0 %	Non-Coding
46	NC_015390	GAT	2	6	20927	20932	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
47	NC_015390	AGA	2	6	20969	20974	66.67 %	0 %	33.33 %	0 %	Non-Coding
48	NC_015390	ATT	2	6	21033	21038	33.33 %	66.67 %	0 %	0 %	Non-Coding
49	NC_015390	TAT	2	6	21080	21085	33.33 %	66.67 %	0 %	0 %	Non-Coding
50	NC_015390	CGA	2	6	21086	21091	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
51	NC_015390	GAT	2	6	21243	21248	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
52	NC_015390	TCG	2	6	21359	21364	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
53	NC_015390	AAT	2	6	21385	21390	66.67 %	33.33 %	0 %	0 %	Non-Coding
54	NC_015390	TAC	2	6	21535	21540	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
55	NC_015390	TGA	2	6	21800	21805	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
56	NC_015390	TAA	2	6	21878	21883	66.67 %	33.33 %	0 %	0 %	Non-Coding
57	NC_015390	GTG	2	6	21905	21910	0 %	33.33 %	66.67 %	0 %	Non-Coding
58	NC_015390	GAT	2	6	21944	21949	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
59	NC_015390	CGA	2	6	21973	21978	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
60	NC_015390	GAA	2	6	21997	22002	66.67 %	0 %	33.33 %	0 %	Non-Coding
61	NC_015390	GAT	2	6	22115	22120	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
62	NC_015390	GTC	2	6	22185	22190	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
63	NC_015390	AGA	2	6	22857	22862	66.67 %	0 %	33.33 %	0 %	Non-Coding
64	NC_015390	CAT	2	6	22936	22941	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
65	NC_015390	GAA	2	6	22961	22966	66.67 %	0 %	33.33 %	0 %	Non-Coding
66	NC_015390	TCT	2	6	23168	23173	0 %	66.67 %	0 %	33.33 %	Non-Coding
67	NC_015390	GAC	2	6	23373	23378	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
68	NC_015390	ATT	2	6	23430	23435	33.33 %	66.67 %	0 %	0 %	Non-Coding
69	NC_015390	TAG	2	6	23469	23474	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
70	NC_015390	ATT	2	6	23787	23792	33.33 %	66.67 %	0 %	0 %	Non-Coding
71	NC_015390	GAC	2	6	23911	23916	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
72	NC_015390	TAC	2	6	23971	23976	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
73	NC_015390	CAT	2	6	24020	24025	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
74	NC_015390	TAC	2	6	24055	24060	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
75	NC_015390	TAA	2	6	24150	24155	66.67 %	33.33 %	0 %	0 %	Non-Coding
76	NC_015390	TAC	2	6	24180	24185	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
77	NC_015390	AGC	2	6	24310	24315	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
78	NC_015390	AAG	2	6	24387	24392	66.67 %	0 %	33.33 %	0 %	Non-Coding
79	NC_015390	GAG	2	6	24411	24416	33.33 %	0 %	66.67 %	0 %	Non-Coding
80	NC_015390	AAT	2	6	25486	25491	66.67 %	33.33 %	0 %	0 %	Non-Coding
81	NC_015390	TAA	2	6	25546	25551	66.67 %	33.33 %	0 %	0 %	Non-Coding
82	NC_015390	TAT	2	6	25557	25562	33.33 %	66.67 %	0 %	0 %	Non-Coding
83	NC_015390	GTC	2	6	25606	25611	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
84	NC_015390	ACT	2	6	25719	25724	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
85	NC_015390	CAA	2	6	25741	25746	66.67 %	0 %	0 %	33.33 %	Non-Coding
86	NC_015390	ATA	2	6	25885	25890	66.67 %	33.33 %	0 %	0 %	Non-Coding
87	NC_015390	ATC	2	6	26528	26533	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
88	NC_015390	ATA	2	6	26579	26584	66.67 %	33.33 %	0 %	0 %	Non-Coding
89	NC_015390	AAT	2	6	27840	27845	66.67 %	33.33 %	0 %	0 %	Non-Coding
90	NC_015390	TTA	2	6	28459	28464	33.33 %	66.67 %	0 %	0 %	Non-Coding
91	NC_015390	CTG	2	6	28527	28532	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
92	NC_015390	GTT	2	6	28550	28555	0 %	66.67 %	33.33 %	0 %	Non-Coding
93	NC_015390	AGC	2	6	28642	28647	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
94	NC_015390	AAC	2	6	29099	29104	66.67 %	0 %	0 %	33.33 %	Non-Coding
95	NC_015390	TAT	2	6	29136	29141	33.33 %	66.67 %	0 %	0 %	Non-Coding
96	NC_015390	TAA	2	6	29165	29170	66.67 %	33.33 %	0 %	0 %	Non-Coding
97	NC_015390	TAT	2	6	29304	29309	33.33 %	66.67 %	0 %	0 %	Non-Coding
98	NC_015390	TAT	2	6	30071	30076	33.33 %	66.67 %	0 %	0 %	Non-Coding
99	NC_015390	ATA	2	6	30317	30322	66.67 %	33.33 %	0 %	0 %	Non-Coding
100	NC_015390	ATT	2	6	30348	30353	33.33 %	66.67 %	0 %	0 %	Non-Coding
101	NC_015390	ATT	2	6	32824	32829	33.33 %	66.67 %	0 %	0 %	Non-Coding
102	NC_015390	TAA	2	6	32891	32896	66.67 %	33.33 %	0 %	0 %	Non-Coding
103	NC_015390	TAT	2	6	33010	33015	33.33 %	66.67 %	0 %	0 %	Non-Coding
104	NC_015390	ACT	2	6	33601	33606	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
105	NC_015390	GTA	2	6	33721	33726	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
106	NC_015390	TCT	2	6	33763	33768	0 %	66.67 %	0 %	33.33 %	Non-Coding
107	NC_015390	AGG	2	6	33823	33828	33.33 %	0 %	66.67 %	0 %	Non-Coding
108	NC_015390	ATA	2	6	34167	34172	66.67 %	33.33 %	0 %	0 %	Non-Coding
109	NC_015390	AAC	2	6	35297	35302	66.67 %	0 %	0 %	33.33 %	Non-Coding
110	NC_015390	CTT	2	6	35336	35341	0 %	66.67 %	0 %	33.33 %	Non-Coding
111	NC_015390	GAA	2	6	35351	35356	66.67 %	0 %	33.33 %	0 %	Non-Coding
112	NC_015390	AAG	2	6	35481	35486	66.67 %	0 %	33.33 %	0 %	Non-Coding
113	NC_015390	GTC	2	6	35526	35531	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
114	NC_015390	AAT	2	6	35534	35539	66.67 %	33.33 %	0 %	0 %	Non-Coding
115	NC_015390	TAA	2	6	35582	35587	66.67 %	33.33 %	0 %	0 %	Non-Coding
116	NC_015390	AAT	2	6	35647	35652	66.67 %	33.33 %	0 %	0 %	Non-Coding
117	NC_015390	CCT	2	6	36144	36149	0 %	33.33 %	0 %	66.67 %	Non-Coding
118	NC_015390	TAA	2	6	36253	36258	66.67 %	33.33 %	0 %	0 %	Non-Coding
119	NC_015390	TTA	2	6	36373	36378	33.33 %	66.67 %	0 %	0 %	Non-Coding
120	NC_015390	ATC	2	6	36384	36389	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
121	NC_015390	ATA	2	6	36435	36440	66.67 %	33.33 %	0 %	0 %	Non-Coding
122	NC_015390	ATA	2	6	36483	36488	66.67 %	33.33 %	0 %	0 %	Non-Coding
123	NC_015390	ATA	3	9	36524	36532	66.67 %	33.33 %	0 %	0 %	Non-Coding
124	NC_015390	ATC	2	6	36556	36561	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
125	NC_015390	AAT	2	6	36693	36698	66.67 %	33.33 %	0 %	0 %	Non-Coding
126	NC_015390	AAG	2	6	36804	36809	66.67 %	0 %	33.33 %	0 %	Non-Coding
127	NC_015390	TAT	2	6	36861	36866	33.33 %	66.67 %	0 %	0 %	Non-Coding
128	NC_015390	TAT	2	6	36871	36876	33.33 %	66.67 %	0 %	0 %	Non-Coding
129	NC_015390	TTA	2	6	36904	36909	33.33 %	66.67 %	0 %	0 %	Non-Coding
130	NC_015390	GCA	2	6	37782	37787	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
131	NC_015390	AAT	2	6	37975	37980	66.67 %	33.33 %	0 %	0 %	Non-Coding
132	NC_015390	ATA	2	6	38013	38018	66.67 %	33.33 %	0 %	0 %	Non-Coding
133	NC_015390	AGG	2	6	38020	38025	33.33 %	0 %	66.67 %	0 %	Non-Coding
134	NC_015390	TAA	2	6	38688	38693	66.67 %	33.33 %	0 %	0 %	Non-Coding
135	NC_015390	CTA	2	6	38743	38748	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
136	NC_015390	TAG	2	6	38771	38776	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
137	NC_015390	TAT	2	6	38846	38851	33.33 %	66.67 %	0 %	0 %	Non-Coding
138	NC_015390	AAT	3	9	38917	38925	66.67 %	33.33 %	0 %	0 %	Non-Coding
139	NC_015390	TAT	2	6	38932	38937	33.33 %	66.67 %	0 %	0 %	Non-Coding
140	NC_015390	AAG	2	6	38991	38996	66.67 %	0 %	33.33 %	0 %	Non-Coding
141	NC_015390	ATT	3	9	39249	39257	33.33 %	66.67 %	0 %	0 %	Non-Coding
142	NC_015390	CAC	2	6	39317	39322	33.33 %	0 %	0 %	66.67 %	Non-Coding
143	NC_015390	ATT	2	6	39376	39381	33.33 %	66.67 %	0 %	0 %	Non-Coding
144	NC_015390	TAT	2	6	39394	39399	33.33 %	66.67 %	0 %	0 %	Non-Coding
145	NC_015390	ATT	2	6	39421	39426	33.33 %	66.67 %	0 %	0 %	Non-Coding
146	NC_015390	ATC	2	6	40125	40130	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
147	NC_015390	TAA	2	6	40143	40148	66.67 %	33.33 %	0 %	0 %	Non-Coding
148	NC_015390	ATT	2	6	40551	40556	33.33 %	66.67 %	0 %	0 %	Non-Coding
149	NC_015390	AAC	2	6	40562	40567	66.67 %	0 %	0 %	33.33 %	Non-Coding
150	NC_015390	CCT	2	6	40802	40807	0 %	33.33 %	0 %	66.67 %	Non-Coding
151	NC_015390	CCT	2	6	42084	42089	0 %	33.33 %	0 %	66.67 %	Non-Coding
152	NC_015390	TTA	2	6	42171	42176	33.33 %	66.67 %	0 %	0 %	Non-Coding
153	NC_015390	TAT	3	9	42197	42205	33.33 %	66.67 %	0 %	0 %	Non-Coding
154	NC_015390	AGG	2	6	42288	42293	33.33 %	0 %	66.67 %	0 %	Non-Coding
155	NC_015390	TTA	2	6	43369	43374	33.33 %	66.67 %	0 %	0 %	Non-Coding
156	NC_015390	CAA	2	6	43447	43452	66.67 %	0 %	0 %	33.33 %	Non-Coding
157	NC_015390	TTA	2	6	44021	44026	33.33 %	66.67 %	0 %	0 %	Non-Coding
158	NC_015390	CTC	2	6	45294	45299	0 %	33.33 %	0 %	66.67 %	Non-Coding
159	NC_015390	TAT	2	6	45300	45305	33.33 %	66.67 %	0 %	0 %	Non-Coding
160	NC_015390	ATA	2	6	45350	45355	66.67 %	33.33 %	0 %	0 %	Non-Coding
161	NC_015390	TTA	2	6	46585	46590	33.33 %	66.67 %	0 %	0 %	Non-Coding
162	NC_015390	CAA	2	6	48104	48109	66.67 %	0 %	0 %	33.33 %	Non-Coding
163	NC_015390	TAA	3	9	48132	48140	66.67 %	33.33 %	0 %	0 %	Non-Coding
164	NC_015390	ATT	2	6	48146	48151	33.33 %	66.67 %	0 %	0 %	Non-Coding
165	NC_015390	ATA	2	6	48173	48178	66.67 %	33.33 %	0 %	0 %	Non-Coding
166	NC_015390	ATT	2	6	48216	48221	33.33 %	66.67 %	0 %	0 %	Non-Coding
167	NC_015390	AGA	2	6	48223	48228	66.67 %	0 %	33.33 %	0 %	Non-Coding
168	NC_015390	CCT	2	6	48965	48970	0 %	33.33 %	0 %	66.67 %	Non-Coding
169	NC_015390	CAA	2	6	49046	49051	66.67 %	0 %	0 %	33.33 %	Non-Coding
170	NC_015390	GTG	2	6	49229	49234	0 %	33.33 %	66.67 %	0 %	Non-Coding
171	NC_015390	TAT	2	6	49303	49308	33.33 %	66.67 %	0 %	0 %	Non-Coding
172	NC_015390	TCG	2	6	49356	49361	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
173	NC_015390	GTT	2	6	49364	49369	0 %	66.67 %	33.33 %	0 %	Non-Coding
174	NC_015390	CCA	2	6	49457	49462	33.33 %	0 %	0 %	66.67 %	Non-Coding
175	NC_015390	GCG	2	6	49545	49550	0 %	0 %	66.67 %	33.33 %	Non-Coding
176	NC_015390	AAT	2	6	49666	49671	66.67 %	33.33 %	0 %	0 %	Non-Coding
177	NC_015390	TTG	2	6	49672	49677	0 %	66.67 %	33.33 %	0 %	Non-Coding
178	NC_015390	TAC	2	6	49786	49791	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
179	NC_015390	GTA	2	6	50041	50046	33.33 %	33.33 %	33.33 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.