MICAS: Microsatellite Analysis Server 3.0

All Non-Coding Repeats of Clostridium tetani E88 chromosome

Total Repeats: 12597

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S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
12501	NC_004557	CTG	2	6	2793141	2793146	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
12502	NC_004557	TCG	2	6	2793216	2793221	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
12503	NC_004557	TTACC	2	10	2793235	2793244	20 %	40 %	0 %	40 %	Non-Coding
12504	NC_004557	TCC	2	6	2793334	2793339	0 %	33.33 %	0 %	66.67 %	Non-Coding
12505	NC_004557	CCG	2	6	2793395	2793400	0 %	0 %	33.33 %	66.67 %	Non-Coding
12506	NC_004557	GAAG	2	8	2793415	2793422	50 %	0 %	50 %	0 %	Non-Coding
12507	NC_004557	CGC	2	6	2793453	2793458	0 %	0 %	33.33 %	66.67 %	Non-Coding
12508	NC_004557	TA	4	8	2793517	2793524	50 %	50 %	0 %	0 %	Non-Coding
12509	NC_004557	T	6	6	2793551	2793556	0 %	100 %	0 %	0 %	Non-Coding
12510	NC_004557	AAT	2	6	2793609	2793614	66.67 %	33.33 %	0 %	0 %	Non-Coding
12511	NC_004557	ATA	2	6	2793630	2793635	66.67 %	33.33 %	0 %	0 %	Non-Coding
12512	NC_004557	ATT	2	6	2793659	2793664	33.33 %	66.67 %	0 %	0 %	Non-Coding
12513	NC_004557	TGG	2	6	2793666	2793671	0 %	33.33 %	66.67 %	0 %	Non-Coding
12514	NC_004557	TGG	2	6	2793748	2793753	0 %	33.33 %	66.67 %	0 %	Non-Coding
12515	NC_004557	GAA	2	6	2794004	2794009	66.67 %	0 %	33.33 %	0 %	Non-Coding
12516	NC_004557	AAT	2	6	2794024	2794029	66.67 %	33.33 %	0 %	0 %	Non-Coding
12517	NC_004557	AAT	2	6	2794052	2794057	66.67 %	33.33 %	0 %	0 %	Non-Coding
12518	NC_004557	TCAG	2	8	2794084	2794091	25 %	25 %	25 %	25 %	Non-Coding
12519	NC_004557	TGC	2	6	2794102	2794107	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
12520	NC_004557	TTC	2	6	2794137	2794142	0 %	66.67 %	0 %	33.33 %	Non-Coding
12521	NC_004557	ACG	2	6	2794361	2794366	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
12522	NC_004557	CGA	2	6	2794441	2794446	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
12523	NC_004557	ACC	2	6	2794556	2794561	33.33 %	0 %	0 %	66.67 %	Non-Coding
12524	NC_004557	CG	3	6	2794639	2794644	0 %	0 %	50 %	50 %	Non-Coding
12525	NC_004557	AGG	2	6	2794692	2794697	33.33 %	0 %	66.67 %	0 %	Non-Coding
12526	NC_004557	GGT	2	6	2794780	2794785	0 %	33.33 %	66.67 %	0 %	Non-Coding
12527	NC_004557	AGCA	2	8	2794917	2794924	50 %	0 %	25 %	25 %	Non-Coding
12528	NC_004557	GCC	2	6	2795050	2795055	0 %	0 %	33.33 %	66.67 %	Non-Coding
12529	NC_004557	CGCTT	2	10	2795078	2795087	0 %	40 %	20 %	40 %	Non-Coding
12530	NC_004557	TTC	2	6	2795274	2795279	0 %	66.67 %	0 %	33.33 %	Non-Coding
12531	NC_004557	TC	3	6	2795295	2795300	0 %	50 %	0 %	50 %	Non-Coding
12532	NC_004557	ACCT	2	8	2795304	2795311	25 %	25 %	0 %	50 %	Non-Coding
12533	NC_004557	AGCTT	2	10	2795411	2795420	20 %	40 %	20 %	20 %	Non-Coding
12534	NC_004557	AC	3	6	2795457	2795462	50 %	0 %	0 %	50 %	Non-Coding
12535	NC_004557	ACTC	2	8	2795674	2795681	25 %	25 %	0 %	50 %	Non-Coding
12536	NC_004557	CTT	2	6	2795697	2795702	0 %	66.67 %	0 %	33.33 %	Non-Coding
12537	NC_004557	CTC	2	6	2795731	2795736	0 %	33.33 %	0 %	66.67 %	Non-Coding
12538	NC_004557	GGT	2	6	2795763	2795768	0 %	33.33 %	66.67 %	0 %	Non-Coding
12539	NC_004557	GCT	2	6	2795842	2795847	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
12540	NC_004557	ACTTA	2	10	2795894	2795903	40 %	40 %	0 %	20 %	Non-Coding
12541	NC_004557	GTT	2	6	2795932	2795937	0 %	66.67 %	33.33 %	0 %	Non-Coding
12542	NC_004557	TGT	2	6	2796025	2796030	0 %	66.67 %	33.33 %	0 %	Non-Coding
12543	NC_004557	GAG	2	6	2796100	2796105	33.33 %	0 %	66.67 %	0 %	Non-Coding
12544	NC_004557	TCC	2	6	2796188	2796193	0 %	33.33 %	0 %	66.67 %	Non-Coding
12545	NC_004557	CA	3	6	2796367	2796372	50 %	0 %	0 %	50 %	Non-Coding
12546	NC_004557	CTCCC	2	10	2796422	2796431	0 %	20 %	0 %	80 %	Non-Coding
12547	NC_004557	GGT	2	6	2796502	2796507	0 %	33.33 %	66.67 %	0 %	Non-Coding
12548	NC_004557	T	6	6	2796573	2796578	0 %	100 %	0 %	0 %	Non-Coding
12549	NC_004557	CT	3	6	2796618	2796623	0 %	50 %	0 %	50 %	Non-Coding
12550	NC_004557	GTCT	2	8	2796633	2796640	0 %	50 %	25 %	25 %	Non-Coding
12551	NC_004557	ATG	2	6	2796643	2796648	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
12552	NC_004557	AAAT	2	8	2796667	2796674	75 %	25 %	0 %	0 %	Non-Coding
12553	NC_004557	TCGC	2	8	2796698	2796705	0 %	25 %	25 %	50 %	Non-Coding
12554	NC_004557	CTA	2	6	2796708	2796713	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
12555	NC_004557	TCC	2	6	2796737	2796742	0 %	33.33 %	0 %	66.67 %	Non-Coding
12556	NC_004557	TGC	2	6	2797001	2797006	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
12557	NC_004557	GCT	2	6	2797030	2797035	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
12558	NC_004557	CACTT	2	10	2797036	2797045	20 %	40 %	0 %	40 %	Non-Coding
12559	NC_004557	TAC	2	6	2797055	2797060	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
12560	NC_004557	TTA	2	6	2797096	2797101	33.33 %	66.67 %	0 %	0 %	Non-Coding
12561	NC_004557	TGG	2	6	2797155	2797160	0 %	33.33 %	66.67 %	0 %	Non-Coding
12562	NC_004557	TC	3	6	2797254	2797259	0 %	50 %	0 %	50 %	Non-Coding
12563	NC_004557	AGG	2	6	2797303	2797308	33.33 %	0 %	66.67 %	0 %	Non-Coding
12564	NC_004557	GT	3	6	2797444	2797449	0 %	50 %	50 %	0 %	Non-Coding
12565	NC_004557	TC	3	6	2797586	2797591	0 %	50 %	0 %	50 %	Non-Coding
12566	NC_004557	GT	3	6	2797612	2797617	0 %	50 %	50 %	0 %	Non-Coding
12567	NC_004557	ATG	2	6	2797637	2797642	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
12568	NC_004557	TCC	2	6	2797663	2797668	0 %	33.33 %	0 %	66.67 %	Non-Coding
12569	NC_004557	TAA	3	9	2797718	2797726	66.67 %	33.33 %	0 %	0 %	Non-Coding
12570	NC_004557	CACGA	2	10	2797762	2797771	40 %	0 %	20 %	40 %	Non-Coding
12571	NC_004557	GAC	2	6	2797775	2797780	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
12572	NC_004557	CAC	2	6	2797788	2797793	33.33 %	0 %	0 %	66.67 %	Non-Coding
12573	NC_004557	TTC	2	6	2797863	2797868	0 %	66.67 %	0 %	33.33 %	Non-Coding
12574	NC_004557	GCT	2	6	2797898	2797903	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
12575	NC_004557	CCT	2	6	2798001	2798006	0 %	33.33 %	0 %	66.67 %	Non-Coding
12576	NC_004557	TTC	2	6	2798124	2798129	0 %	66.67 %	0 %	33.33 %	Non-Coding
12577	NC_004557	GCT	2	6	2798315	2798320	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
12578	NC_004557	TCA	2	6	2798401	2798406	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
12579	NC_004557	TGC	2	6	2798419	2798424	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
12580	NC_004557	CTG	2	6	2798458	2798463	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
12581	NC_004557	TCG	2	6	2798533	2798538	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
12582	NC_004557	TTACC	2	10	2798552	2798561	20 %	40 %	0 %	40 %	Non-Coding
12583	NC_004557	TCC	2	6	2798651	2798656	0 %	33.33 %	0 %	66.67 %	Non-Coding
12584	NC_004557	CCG	2	6	2798712	2798717	0 %	0 %	33.33 %	66.67 %	Non-Coding
12585	NC_004557	GAAG	2	8	2798732	2798739	50 %	0 %	50 %	0 %	Non-Coding
12586	NC_004557	CGC	2	6	2798770	2798775	0 %	0 %	33.33 %	66.67 %	Non-Coding
12587	NC_004557	TA	4	8	2798834	2798841	50 %	50 %	0 %	0 %	Non-Coding
12588	NC_004557	T	6	6	2798868	2798873	0 %	100 %	0 %	0 %	Non-Coding
12589	NC_004557	T	8	8	2798967	2798974	0 %	100 %	0 %	0 %	Non-Coding
12590	NC_004557	T	6	6	2798989	2798994	0 %	100 %	0 %	0 %	Non-Coding
12591	NC_004557	ATTT	2	8	2799002	2799009	25 %	75 %	0 %	0 %	Non-Coding
12592	NC_004557	GTT	2	6	2799039	2799044	0 %	66.67 %	33.33 %	0 %	Non-Coding
12593	NC_004557	CAA	2	6	2799051	2799056	66.67 %	0 %	0 %	33.33 %	Non-Coding
12594	NC_004557	TAT	2	6	2799134	2799139	33.33 %	66.67 %	0 %	0 %	Non-Coding
12595	NC_004557	GTT	2	6	2799185	2799190	0 %	66.67 %	33.33 %	0 %	Non-Coding
12596	NC_004557	TAATA	2	10	2799191	2799200	60 %	40 %	0 %	0 %	Non-Coding
12597	NC_004557	TAT	2	6	2799225	2799230	33.33 %	66.67 %	0 %	0 %	Non-Coding

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©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.