MICAS: Microsatellite Analysis Server 3.0

All Repeats of Caldicellulosiruptor lactoaceticus 6A chromosome

Total Repeats: 62091

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S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
62001	NC_015949	TAC	2	6	2670669	2670674	33.33 %	33.33 %	0 %	33.33 %	344997649
62002	NC_015949	CT	3	6	2670777	2670782	0 %	50 %	0 %	50 %	344997649
62003	NC_015949	TTC	2	6	2670789	2670794	0 %	66.67 %	0 %	33.33 %	344997649
62004	NC_015949	CCG	2	6	2670809	2670814	0 %	0 %	33.33 %	66.67 %	344997649
62005	NC_015949	ATCC	2	8	2670910	2670917	25 %	25 %	0 %	50 %	344997649
62006	NC_015949	TCA	2	6	2670934	2670939	33.33 %	33.33 %	0 %	33.33 %	344997649
62007	NC_015949	CCTTG	2	10	2670991	2671000	0 %	40 %	20 %	40 %	344997649
62008	NC_015949	T	6	6	2671007	2671012	0 %	100 %	0 %	0 %	344997649
62009	NC_015949	TAA	2	6	2671023	2671028	66.67 %	33.33 %	0 %	0 %	344997649
62010	NC_015949	A	6	6	2671086	2671091	100 %	0 %	0 %	0 %	344997649
62011	NC_015949	CTA	2	6	2671148	2671153	33.33 %	33.33 %	0 %	33.33 %	344997649
62012	NC_015949	ATT	2	6	2671168	2671173	33.33 %	66.67 %	0 %	0 %	344997649
62013	NC_015949	AGA	2	6	2671179	2671184	66.67 %	0 %	33.33 %	0 %	344997649
62014	NC_015949	GTC	2	6	2671441	2671446	0 %	33.33 %	33.33 %	33.33 %	344997649
62015	NC_015949	CTG	2	6	2671541	2671546	0 %	33.33 %	33.33 %	33.33 %	344997649
62016	NC_015949	TATT	2	8	2671562	2671569	25 %	75 %	0 %	0 %	344997649
62017	NC_015949	ATA	2	6	2671577	2671582	66.67 %	33.33 %	0 %	0 %	344997649
62018	NC_015949	A	6	6	2671612	2671617	100 %	0 %	0 %	0 %	344997649
62019	NC_015949	TAA	2	6	2671620	2671625	66.67 %	33.33 %	0 %	0 %	344997649
62020	NC_015949	A	6	6	2671630	2671635	100 %	0 %	0 %	0 %	344997649
62021	NC_015949	T	6	6	2671657	2671662	0 %	100 %	0 %	0 %	Non-Coding
62022	NC_015949	T	6	6	2671730	2671735	0 %	100 %	0 %	0 %	Non-Coding
62023	NC_015949	TAA	2	6	2671773	2671778	66.67 %	33.33 %	0 %	0 %	Non-Coding
62024	NC_015949	TTG	2	6	2671802	2671807	0 %	66.67 %	33.33 %	0 %	Non-Coding
62025	NC_015949	CTT	2	6	2671853	2671858	0 %	66.67 %	0 %	33.33 %	Non-Coding
62026	NC_015949	A	6	6	2671923	2671928	100 %	0 %	0 %	0 %	Non-Coding
62027	NC_015949	TAT	2	6	2671980	2671985	33.33 %	66.67 %	0 %	0 %	Non-Coding
62028	NC_015949	A	6	6	2672000	2672005	100 %	0 %	0 %	0 %	Non-Coding
62029	NC_015949	GTT	2	6	2672014	2672019	0 %	66.67 %	33.33 %	0 %	Non-Coding
62030	NC_015949	CTTT	2	8	2672035	2672042	0 %	75 %	0 %	25 %	Non-Coding
62031	NC_015949	CATTAC	2	12	2672045	2672056	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
62032	NC_015949	T	6	6	2672058	2672063	0 %	100 %	0 %	0 %	Non-Coding
62033	NC_015949	TAT	2	6	2672109	2672114	33.33 %	66.67 %	0 %	0 %	Non-Coding
62034	NC_015949	A	6	6	2672163	2672168	100 %	0 %	0 %	0 %	Non-Coding
62035	NC_015949	A	6	6	2672171	2672176	100 %	0 %	0 %	0 %	Non-Coding
62036	NC_015949	GAACA	2	10	2672210	2672219	60 %	0 %	20 %	20 %	Non-Coding
62037	NC_015949	TAA	2	6	2672262	2672267	66.67 %	33.33 %	0 %	0 %	Non-Coding
62038	NC_015949	GTA	2	6	2672283	2672288	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
62039	NC_015949	TTG	2	6	2672325	2672330	0 %	66.67 %	33.33 %	0 %	Non-Coding
62040	NC_015949	GGT	2	6	2672335	2672340	0 %	33.33 %	66.67 %	0 %	Non-Coding
62041	NC_015949	GA	3	6	2672371	2672376	50 %	0 %	50 %	0 %	Non-Coding
62042	NC_015949	A	6	6	2672423	2672428	100 %	0 %	0 %	0 %	Non-Coding
62043	NC_015949	TTTG	2	8	2672591	2672598	0 %	75 %	25 %	0 %	344997650
62044	NC_015949	GAA	2	6	2672654	2672659	66.67 %	0 %	33.33 %	0 %	344997650
62045	NC_015949	AAT	2	6	2672710	2672715	66.67 %	33.33 %	0 %	0 %	344997650
62046	NC_015949	TTA	2	6	2672772	2672777	33.33 %	66.67 %	0 %	0 %	344997650
62047	NC_015949	TA	3	6	2672909	2672914	50 %	50 %	0 %	0 %	344997650
62048	NC_015949	GAA	2	6	2672926	2672931	66.67 %	0 %	33.33 %	0 %	344997650
62049	NC_015949	ACAT	2	8	2672952	2672959	50 %	25 %	0 %	25 %	344997651
62050	NC_015949	AGA	2	6	2672972	2672977	66.67 %	0 %	33.33 %	0 %	344997651
62051	NC_015949	AAG	2	6	2673060	2673065	66.67 %	0 %	33.33 %	0 %	344997651
62052	NC_015949	TGG	2	6	2673108	2673113	0 %	33.33 %	66.67 %	0 %	344997651
62053	NC_015949	TTC	2	6	2673133	2673138	0 %	66.67 %	0 %	33.33 %	344997651
62054	NC_015949	GCA	2	6	2673156	2673161	33.33 %	0 %	33.33 %	33.33 %	344997651
62055	NC_015949	CAA	2	6	2673165	2673170	66.67 %	0 %	0 %	33.33 %	344997651
62056	NC_015949	AAG	2	6	2673207	2673212	66.67 %	0 %	33.33 %	0 %	344997651
62057	NC_015949	A	6	6	2673219	2673224	100 %	0 %	0 %	0 %	344997651
62058	NC_015949	GTG	2	6	2673279	2673284	0 %	33.33 %	66.67 %	0 %	344997651
62059	NC_015949	AAAG	2	8	2673288	2673295	75 %	0 %	25 %	0 %	344997651
62060	NC_015949	T	7	7	2673355	2673361	0 %	100 %	0 %	0 %	344997651
62061	NC_015949	ATC	2	6	2673409	2673414	33.33 %	33.33 %	0 %	33.33 %	344997651
62062	NC_015949	AAG	3	9	2673420	2673428	66.67 %	0 %	33.33 %	0 %	344997651
62063	NC_015949	TAT	2	6	2673429	2673434	33.33 %	66.67 %	0 %	0 %	344997651
62064	NC_015949	GTT	2	6	2673444	2673449	0 %	66.67 %	33.33 %	0 %	344997651
62065	NC_015949	GAA	2	6	2673456	2673461	66.67 %	0 %	33.33 %	0 %	344997651
62066	NC_015949	GTTT	2	8	2673522	2673529	0 %	75 %	25 %	0 %	344997651
62067	NC_015949	GAA	2	6	2673535	2673540	66.67 %	0 %	33.33 %	0 %	344997651
62068	NC_015949	TGG	2	6	2673557	2673562	0 %	33.33 %	66.67 %	0 %	344997651
62069	NC_015949	CAG	2	6	2673612	2673617	33.33 %	0 %	33.33 %	33.33 %	344997651
62070	NC_015949	AGT	2	6	2673824	2673829	33.33 %	33.33 %	33.33 %	0 %	344997651
62071	NC_015949	AGA	2	6	2673878	2673883	66.67 %	0 %	33.33 %	0 %	344997651
62072	NC_015949	CAAAG	2	10	2673884	2673893	60 %	0 %	20 %	20 %	344997651
62073	NC_015949	TGT	2	6	2673908	2673913	0 %	66.67 %	33.33 %	0 %	344997651
62074	NC_015949	GTA	2	6	2674077	2674082	33.33 %	33.33 %	33.33 %	0 %	344997651
62075	NC_015949	TGT	2	6	2674128	2674133	0 %	66.67 %	33.33 %	0 %	344997651
62076	NC_015949	CTG	2	6	2674135	2674140	0 %	33.33 %	33.33 %	33.33 %	344997651
62077	NC_015949	GAAA	2	8	2674174	2674181	75 %	0 %	25 %	0 %	344997651
62078	NC_015949	CTG	2	6	2674226	2674231	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
62079	NC_015949	TAT	2	6	2674247	2674252	33.33 %	66.67 %	0 %	0 %	Non-Coding
62080	NC_015949	AAG	2	6	2674261	2674266	66.67 %	0 %	33.33 %	0 %	Non-Coding
62081	NC_015949	CA	3	6	2674362	2674367	50 %	0 %	0 %	50 %	Non-Coding
62082	NC_015949	TTGA	2	8	2674370	2674377	25 %	50 %	25 %	0 %	Non-Coding
62083	NC_015949	A	6	6	2674463	2674468	100 %	0 %	0 %	0 %	Non-Coding
62084	NC_015949	CTTT	2	8	2674495	2674502	0 %	75 %	0 %	25 %	Non-Coding
62085	NC_015949	TCT	2	6	2674510	2674515	0 %	66.67 %	0 %	33.33 %	Non-Coding
62086	NC_015949	ATTCA	2	10	2674589	2674598	40 %	40 %	0 %	20 %	Non-Coding
62087	NC_015949	AAT	2	6	2674603	2674608	66.67 %	33.33 %	0 %	0 %	Non-Coding
62088	NC_015949	TC	3	6	2674680	2674685	0 %	50 %	0 %	50 %	Non-Coding
62089	NC_015949	AT	3	6	2674689	2674694	50 %	50 %	0 %	0 %	Non-Coding
62090	NC_015949	T	8	8	2674715	2674722	0 %	100 %	0 %	0 %	Non-Coding
62091	NC_015949	GTT	2	6	2674790	2674795	0 %	66.67 %	33.33 %	0 %	Non-Coding

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©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.