MICAS: Microsatellite Analysis Server 3.0

All Non-Coding Repeats of Borrelia crocidurae str. Achema plasmid unnamed

Total Repeats: 123

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_017783	A	6	6	5	10	100 %	0 %	0 %	0 %	Non-Coding
2	NC_017783	AT	3	6	37	42	50 %	50 %	0 %	0 %	Non-Coding
3	NC_017783	ATT	2	6	69	74	33.33 %	66.67 %	0 %	0 %	Non-Coding
4	NC_017783	TAA	2	6	78	83	66.67 %	33.33 %	0 %	0 %	Non-Coding
5	NC_017783	CTAAAT	2	12	105	116	50 %	33.33 %	0 %	16.67 %	Non-Coding
6	NC_017783	ACA	2	6	149	154	66.67 %	0 %	0 %	33.33 %	Non-Coding
7	NC_017783	AT	3	6	276	281	50 %	50 %	0 %	0 %	Non-Coding
8	NC_017783	A	7	7	288	294	100 %	0 %	0 %	0 %	Non-Coding
9	NC_017783	AAT	2	6	296	301	66.67 %	33.33 %	0 %	0 %	Non-Coding
10	NC_017783	AAG	2	6	338	343	66.67 %	0 %	33.33 %	0 %	Non-Coding
11	NC_017783	AGT	2	6	367	372	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
12	NC_017783	TAT	2	6	397	402	33.33 %	66.67 %	0 %	0 %	Non-Coding
13	NC_017783	CAT	2	6	410	415	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
14	NC_017783	ATT	2	6	417	422	33.33 %	66.67 %	0 %	0 %	Non-Coding
15	NC_017783	AAAGAC	2	12	431	442	66.67 %	0 %	16.67 %	16.67 %	Non-Coding
16	NC_017783	A	6	6	465	470	100 %	0 %	0 %	0 %	Non-Coding
17	NC_017783	ATA	2	6	488	493	66.67 %	33.33 %	0 %	0 %	Non-Coding
18	NC_017783	AATA	2	8	495	502	75 %	25 %	0 %	0 %	Non-Coding
19	NC_017783	TAAA	2	8	503	510	75 %	25 %	0 %	0 %	Non-Coding
20	NC_017783	TA	3	6	1113	1118	50 %	50 %	0 %	0 %	Non-Coding
21	NC_017783	ATT	2	6	1133	1138	33.33 %	66.67 %	0 %	0 %	Non-Coding
22	NC_017783	TTATT	2	10	1173	1182	20 %	80 %	0 %	0 %	Non-Coding
23	NC_017783	ATT	2	6	1187	1192	33.33 %	66.67 %	0 %	0 %	Non-Coding
24	NC_017783	CTA	2	6	1197	1202	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
25	NC_017783	TAA	2	6	1222	1227	66.67 %	33.33 %	0 %	0 %	Non-Coding
26	NC_017783	AATATT	2	12	1235	1246	50 %	50 %	0 %	0 %	Non-Coding
27	NC_017783	TA	3	6	1434	1439	50 %	50 %	0 %	0 %	Non-Coding
28	NC_017783	A	9	9	1448	1456	100 %	0 %	0 %	0 %	Non-Coding
29	NC_017783	ATT	2	6	1460	1465	33.33 %	66.67 %	0 %	0 %	Non-Coding
30	NC_017783	GCA	2	6	1468	1473	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
31	NC_017783	ATA	3	9	1477	1485	66.67 %	33.33 %	0 %	0 %	Non-Coding
32	NC_017783	ATA	2	6	1491	1496	66.67 %	33.33 %	0 %	0 %	Non-Coding
33	NC_017783	CTA	2	6	1508	1513	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
34	NC_017783	TAA	2	6	2091	2096	66.67 %	33.33 %	0 %	0 %	Non-Coding
35	NC_017783	ATT	2	6	2103	2108	33.33 %	66.67 %	0 %	0 %	Non-Coding
36	NC_017783	AACTT	2	10	2118	2127	40 %	40 %	0 %	20 %	Non-Coding
37	NC_017783	AG	3	6	4028	4033	50 %	0 %	50 %	0 %	Non-Coding
38	NC_017783	ATC	2	6	4040	4045	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
39	NC_017783	T	6	6	4059	4064	0 %	100 %	0 %	0 %	Non-Coding
40	NC_017783	T	6	6	4099	4104	0 %	100 %	0 %	0 %	Non-Coding
41	NC_017783	TTTTC	2	10	4109	4118	0 %	80 %	0 %	20 %	Non-Coding
42	NC_017783	TAT	2	6	4126	4131	33.33 %	66.67 %	0 %	0 %	Non-Coding
43	NC_017783	TAT	2	6	4135	4140	33.33 %	66.67 %	0 %	0 %	Non-Coding
44	NC_017783	ATT	2	6	4169	4174	33.33 %	66.67 %	0 %	0 %	Non-Coding
45	NC_017783	T	6	6	4183	4188	0 %	100 %	0 %	0 %	Non-Coding
46	NC_017783	GAT	2	6	4189	4194	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
47	NC_017783	TCTT	2	8	4217	4224	0 %	75 %	0 %	25 %	Non-Coding
48	NC_017783	T	6	6	4226	4231	0 %	100 %	0 %	0 %	Non-Coding
49	NC_017783	T	7	7	4267	4273	0 %	100 %	0 %	0 %	Non-Coding
50	NC_017783	N	910	910	4305	5214	0 %	0 %	0 %	0 %	Non-Coding
51	NC_017783	TATT	2	8	5217	5224	25 %	75 %	0 %	0 %	Non-Coding
52	NC_017783	T	8	8	5232	5239	0 %	100 %	0 %	0 %	Non-Coding
53	NC_017783	AT	4	8	5367	5374	50 %	50 %	0 %	0 %	Non-Coding
54	NC_017783	TAT	2	6	5399	5404	33.33 %	66.67 %	0 %	0 %	Non-Coding
55	NC_017783	TAA	2	6	5429	5434	66.67 %	33.33 %	0 %	0 %	Non-Coding
56	NC_017783	A	7	7	5441	5447	100 %	0 %	0 %	0 %	Non-Coding
57	NC_017783	CAA	2	6	5471	5476	66.67 %	0 %	0 %	33.33 %	Non-Coding
58	NC_017783	TTA	2	6	5478	5483	33.33 %	66.67 %	0 %	0 %	Non-Coding
59	NC_017783	T	6	6	5495	5500	0 %	100 %	0 %	0 %	Non-Coding
60	NC_017783	ATA	3	9	5520	5528	66.67 %	33.33 %	0 %	0 %	Non-Coding
61	NC_017783	GTAA	2	8	5540	5547	50 %	25 %	25 %	0 %	Non-Coding
62	NC_017783	ATTT	2	8	5549	5556	25 %	75 %	0 %	0 %	Non-Coding
63	NC_017783	TAA	2	6	5557	5562	66.67 %	33.33 %	0 %	0 %	Non-Coding
64	NC_017783	ATT	2	6	5607	5612	33.33 %	66.67 %	0 %	0 %	Non-Coding
65	NC_017783	A	6	6	5613	5618	100 %	0 %	0 %	0 %	Non-Coding
66	NC_017783	ACA	2	6	5637	5642	66.67 %	0 %	0 %	33.33 %	Non-Coding
67	NC_017783	CAT	2	6	6066	6071	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
68	NC_017783	CTG	2	6	6100	6105	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
69	NC_017783	AT	3	6	6194	6199	50 %	50 %	0 %	0 %	Non-Coding
70	NC_017783	ACA	2	6	6206	6211	66.67 %	0 %	0 %	33.33 %	Non-Coding
71	NC_017783	ATA	2	6	6217	6222	66.67 %	33.33 %	0 %	0 %	Non-Coding
72	NC_017783	GATT	2	8	6223	6230	25 %	50 %	25 %	0 %	Non-Coding
73	NC_017783	N	1911	1911	6247	8157	0 %	0 %	0 %	0 %	Non-Coding
74	NC_017783	GAA	2	6	8181	8186	66.67 %	0 %	33.33 %	0 %	Non-Coding
75	NC_017783	AAT	2	6	8193	8198	66.67 %	33.33 %	0 %	0 %	Non-Coding
76	NC_017783	AGT	2	6	8235	8240	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
77	NC_017783	TAT	2	6	8351	8356	33.33 %	66.67 %	0 %	0 %	Non-Coding
78	NC_017783	AGA	2	6	8379	8384	66.67 %	0 %	33.33 %	0 %	Non-Coding
79	NC_017783	TAA	3	9	8412	8420	66.67 %	33.33 %	0 %	0 %	Non-Coding
80	NC_017783	A	7	7	8461	8467	100 %	0 %	0 %	0 %	Non-Coding
81	NC_017783	TTAAA	2	10	8492	8501	60 %	40 %	0 %	0 %	Non-Coding
82	NC_017783	TA	3	6	8544	8549	50 %	50 %	0 %	0 %	Non-Coding
83	NC_017783	AAT	2	6	8843	8848	66.67 %	33.33 %	0 %	0 %	Non-Coding
84	NC_017783	AATT	2	8	8981	8988	50 %	50 %	0 %	0 %	Non-Coding
85	NC_017783	TGG	2	6	8993	8998	0 %	33.33 %	66.67 %	0 %	Non-Coding
86	NC_017783	GGA	2	6	9018	9023	33.33 %	0 %	66.67 %	0 %	Non-Coding
87	NC_017783	TGT	2	6	9032	9037	0 %	66.67 %	33.33 %	0 %	Non-Coding
88	NC_017783	CAA	2	6	9055	9060	66.67 %	0 %	0 %	33.33 %	Non-Coding
89	NC_017783	ATC	2	6	9142	9147	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
90	NC_017783	ATT	2	6	9154	9159	33.33 %	66.67 %	0 %	0 %	Non-Coding
91	NC_017783	ATA	2	6	9178	9183	66.67 %	33.33 %	0 %	0 %	Non-Coding
92	NC_017783	AT	3	6	9189	9194	50 %	50 %	0 %	0 %	Non-Coding
93	NC_017783	ACA	2	6	9210	9215	66.67 %	0 %	0 %	33.33 %	Non-Coding
94	NC_017783	AAG	2	6	9256	9261	66.67 %	0 %	33.33 %	0 %	Non-Coding
95	NC_017783	TAC	2	6	9298	9303	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
96	NC_017783	ATG	2	6	9325	9330	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
97	NC_017783	ATT	2	6	9351	9356	33.33 %	66.67 %	0 %	0 %	Non-Coding
98	NC_017783	TA	3	6	9400	9405	50 %	50 %	0 %	0 %	Non-Coding
99	NC_017783	GGC	2	6	9411	9416	0 %	0 %	66.67 %	33.33 %	Non-Coding
100	NC_017783	ATA	2	6	9418	9423	66.67 %	33.33 %	0 %	0 %	Non-Coding
101	NC_017783	TAT	2	6	9459	9464	33.33 %	66.67 %	0 %	0 %	Non-Coding
102	NC_017783	AT	3	6	9503	9508	50 %	50 %	0 %	0 %	Non-Coding
103	NC_017783	TAA	2	6	9907	9912	66.67 %	33.33 %	0 %	0 %	Non-Coding
104	NC_017783	TA	3	6	9914	9919	50 %	50 %	0 %	0 %	Non-Coding
105	NC_017783	TCT	2	6	10505	10510	0 %	66.67 %	0 %	33.33 %	Non-Coding
106	NC_017783	T	8	8	10531	10538	0 %	100 %	0 %	0 %	Non-Coding
107	NC_017783	T	6	6	10543	10548	0 %	100 %	0 %	0 %	Non-Coding
108	NC_017783	ATT	2	6	10552	10557	33.33 %	66.67 %	0 %	0 %	Non-Coding
109	NC_017783	T	6	6	10556	10561	0 %	100 %	0 %	0 %	Non-Coding
110	NC_017783	TA	3	6	10660	10665	50 %	50 %	0 %	0 %	Non-Coding
111	NC_017783	AAT	2	6	10666	10671	66.67 %	33.33 %	0 %	0 %	Non-Coding
112	NC_017783	AGA	2	6	10677	10682	66.67 %	0 %	33.33 %	0 %	Non-Coding
113	NC_017783	ATAA	2	8	10739	10746	75 %	25 %	0 %	0 %	Non-Coding
114	NC_017783	GA	3	6	10755	10760	50 %	0 %	50 %	0 %	Non-Coding
115	NC_017783	AAGG	2	8	10763	10770	50 %	0 %	50 %	0 %	Non-Coding
116	NC_017783	TAAT	2	8	10792	10799	50 %	50 %	0 %	0 %	Non-Coding
117	NC_017783	AT	3	6	10810	10815	50 %	50 %	0 %	0 %	Non-Coding
118	NC_017783	GA	3	6	10843	10848	50 %	0 %	50 %	0 %	Non-Coding
119	NC_017783	CT	3	6	10876	10881	0 %	50 %	0 %	50 %	Non-Coding
120	NC_017783	T	7	7	10881	10887	0 %	100 %	0 %	0 %	Non-Coding
121	NC_017783	TGT	2	6	10905	10910	0 %	66.67 %	33.33 %	0 %	Non-Coding
122	NC_017783	ATTT	2	8	10921	10928	25 %	75 %	0 %	0 %	Non-Coding
123	NC_017783	T	7	7	10930	10936	0 %	100 %	0 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.