MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Borrelia crocidurae str. Achema plasmid unnamed

Total Repeats: 113

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_017780	CCT	2	6	64	69	0 %	33.33 %	0 %	66.67 %	Non-Coding
2	NC_017780	TAG	2	6	212	217	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
3	NC_017780	TAA	2	6	318	323	66.67 %	33.33 %	0 %	0 %	Non-Coding
4	NC_017780	ATT	2	6	334	339	33.33 %	66.67 %	0 %	0 %	Non-Coding
5	NC_017780	CTT	2	6	876	881	0 %	66.67 %	0 %	33.33 %	Non-Coding
6	NC_017780	CAG	2	6	936	941	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
7	NC_017780	CCT	2	6	1008	1013	0 %	33.33 %	0 %	66.67 %	Non-Coding
8	NC_017780	TAT	2	6	1024	1029	33.33 %	66.67 %	0 %	0 %	Non-Coding
9	NC_017780	TAT	2	6	1132	1137	33.33 %	66.67 %	0 %	0 %	Non-Coding
10	NC_017780	AAT	2	6	1143	1148	66.67 %	33.33 %	0 %	0 %	Non-Coding
11	NC_017780	ATA	2	6	1229	1234	66.67 %	33.33 %	0 %	0 %	Non-Coding
12	NC_017780	TAA	2	6	1332	1337	66.67 %	33.33 %	0 %	0 %	Non-Coding
13	NC_017780	ATA	3	9	1346	1354	66.67 %	33.33 %	0 %	0 %	Non-Coding
14	NC_017780	CAC	2	6	2491	2496	33.33 %	0 %	0 %	66.67 %	Non-Coding
15	NC_017780	CAT	2	6	2497	2502	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
16	NC_017780	ATT	3	9	2507	2515	33.33 %	66.67 %	0 %	0 %	Non-Coding
17	NC_017780	CTT	2	6	2521	2526	0 %	66.67 %	0 %	33.33 %	Non-Coding
18	NC_017780	TTC	2	6	2560	2565	0 %	66.67 %	0 %	33.33 %	Non-Coding
19	NC_017780	ACC	2	6	3900	3905	33.33 %	0 %	0 %	66.67 %	Non-Coding
20	NC_017780	ATC	2	6	3949	3954	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
21	NC_017780	TTA	2	6	3988	3993	33.33 %	66.67 %	0 %	0 %	Non-Coding
22	NC_017780	TAA	2	6	4137	4142	66.67 %	33.33 %	0 %	0 %	Non-Coding
23	NC_017780	AAC	2	6	4197	4202	66.67 %	0 %	0 %	33.33 %	Non-Coding
24	NC_017780	TAT	2	6	4254	4259	33.33 %	66.67 %	0 %	0 %	Non-Coding
25	NC_017780	TAA	2	6	4432	4437	66.67 %	33.33 %	0 %	0 %	Non-Coding
26	NC_017780	AAT	2	6	4898	4903	66.67 %	33.33 %	0 %	0 %	Non-Coding
27	NC_017780	ATA	3	9	4976	4984	66.67 %	33.33 %	0 %	0 %	Non-Coding
28	NC_017780	ATA	2	6	5114	5119	66.67 %	33.33 %	0 %	0 %	Non-Coding
29	NC_017780	ATA	2	6	5160	5165	66.67 %	33.33 %	0 %	0 %	Non-Coding
30	NC_017780	AAT	2	6	5200	5205	66.67 %	33.33 %	0 %	0 %	Non-Coding
31	NC_017780	ACA	2	6	5223	5228	66.67 %	0 %	0 %	33.33 %	Non-Coding
32	NC_017780	AAT	2	6	5230	5235	66.67 %	33.33 %	0 %	0 %	Non-Coding
33	NC_017780	TGA	2	6	6418	6423	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
34	NC_017780	ATA	2	6	6465	6470	66.67 %	33.33 %	0 %	0 %	Non-Coding
35	NC_017780	CGC	2	6	6483	6488	0 %	0 %	33.33 %	66.67 %	Non-Coding
36	NC_017780	ACT	2	6	6524	6529	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
37	NC_017780	TAA	2	6	6653	6658	66.67 %	33.33 %	0 %	0 %	Non-Coding
38	NC_017780	TAA	3	9	6671	6679	66.67 %	33.33 %	0 %	0 %	Non-Coding
39	NC_017780	ATT	2	6	6785	6790	33.33 %	66.67 %	0 %	0 %	Non-Coding
40	NC_017780	ATG	2	6	6887	6892	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
41	NC_017780	TAT	2	6	6925	6930	33.33 %	66.67 %	0 %	0 %	Non-Coding
42	NC_017780	ATT	2	6	6933	6938	33.33 %	66.67 %	0 %	0 %	Non-Coding
43	NC_017780	ATT	2	6	6942	6947	33.33 %	66.67 %	0 %	0 %	Non-Coding
44	NC_017780	GTT	2	6	7615	7620	0 %	66.67 %	33.33 %	0 %	Non-Coding
45	NC_017780	CAA	2	6	8511	8516	66.67 %	0 %	0 %	33.33 %	Non-Coding
46	NC_017780	AAT	2	6	8541	8546	66.67 %	33.33 %	0 %	0 %	Non-Coding
47	NC_017780	ATA	3	9	8577	8585	66.67 %	33.33 %	0 %	0 %	Non-Coding
48	NC_017780	ATT	2	6	8589	8594	33.33 %	66.67 %	0 %	0 %	Non-Coding
49	NC_017780	TAT	2	6	8603	8608	33.33 %	66.67 %	0 %	0 %	Non-Coding
50	NC_017780	TGT	2	6	8620	8625	0 %	66.67 %	33.33 %	0 %	Non-Coding
51	NC_017780	ATT	2	6	8685	8690	33.33 %	66.67 %	0 %	0 %	Non-Coding
52	NC_017780	TTA	2	6	8715	8720	33.33 %	66.67 %	0 %	0 %	Non-Coding
53	NC_017780	TAT	2	6	8743	8748	33.33 %	66.67 %	0 %	0 %	Non-Coding
54	NC_017780	TTA	2	6	8749	8754	33.33 %	66.67 %	0 %	0 %	Non-Coding
55	NC_017780	TTA	2	6	8778	8783	33.33 %	66.67 %	0 %	0 %	Non-Coding
56	NC_017780	TAT	2	6	8795	8800	33.33 %	66.67 %	0 %	0 %	Non-Coding
57	NC_017780	TAA	2	6	8822	8827	66.67 %	33.33 %	0 %	0 %	Non-Coding
58	NC_017780	TAA	2	6	8832	8837	66.67 %	33.33 %	0 %	0 %	Non-Coding
59	NC_017780	ATT	2	6	8988	8993	33.33 %	66.67 %	0 %	0 %	Non-Coding
60	NC_017780	ATA	2	6	8997	9002	66.67 %	33.33 %	0 %	0 %	Non-Coding
61	NC_017780	TCT	2	6	9155	9160	0 %	66.67 %	0 %	33.33 %	Non-Coding
62	NC_017780	ATT	2	6	9190	9195	33.33 %	66.67 %	0 %	0 %	Non-Coding
63	NC_017780	TAT	2	6	9301	9306	33.33 %	66.67 %	0 %	0 %	Non-Coding
64	NC_017780	TTA	2	6	9307	9312	33.33 %	66.67 %	0 %	0 %	Non-Coding
65	NC_017780	CAT	3	9	9357	9365	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
66	NC_017780	TAA	2	6	9430	9435	66.67 %	33.33 %	0 %	0 %	Non-Coding
67	NC_017780	ATG	2	6	9490	9495	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
68	NC_017780	ATT	2	6	9561	9566	33.33 %	66.67 %	0 %	0 %	Non-Coding
69	NC_017780	AAC	2	6	9725	9730	66.67 %	0 %	0 %	33.33 %	Non-Coding
70	NC_017780	TAA	2	6	9797	9802	66.67 %	33.33 %	0 %	0 %	Non-Coding
71	NC_017780	ATG	2	6	9871	9876	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
72	NC_017780	TAT	2	6	9879	9884	33.33 %	66.67 %	0 %	0 %	Non-Coding
73	NC_017780	TTA	2	6	9941	9946	33.33 %	66.67 %	0 %	0 %	Non-Coding
74	NC_017780	ATG	2	6	9970	9975	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
75	NC_017780	GAT	2	6	10029	10034	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
76	NC_017780	GAT	2	6	10038	10043	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
77	NC_017780	AGA	2	6	10067	10072	66.67 %	0 %	33.33 %	0 %	Non-Coding
78	NC_017780	TTA	2	6	10083	10088	33.33 %	66.67 %	0 %	0 %	Non-Coding
79	NC_017780	GTA	2	6	10140	10145	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
80	NC_017780	CAT	2	6	10240	10245	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
81	NC_017780	CTT	3	9	10276	10284	0 %	66.67 %	0 %	33.33 %	Non-Coding
82	NC_017780	TGA	2	6	10286	10291	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
83	NC_017780	AAT	2	6	10299	10304	66.67 %	33.33 %	0 %	0 %	Non-Coding
84	NC_017780	TAA	2	6	10635	10640	66.67 %	33.33 %	0 %	0 %	Non-Coding
85	NC_017780	AGC	2	6	10647	10652	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
86	NC_017780	GTT	2	6	10660	10665	0 %	66.67 %	33.33 %	0 %	Non-Coding
87	NC_017780	GTA	2	6	10796	10801	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
88	NC_017780	TGA	2	6	10812	10817	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
89	NC_017780	TTA	2	6	10831	10836	33.33 %	66.67 %	0 %	0 %	Non-Coding
90	NC_017780	TGA	2	6	11259	11264	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
91	NC_017780	TAA	2	6	11271	11276	66.67 %	33.33 %	0 %	0 %	Non-Coding
92	NC_017780	TGA	2	6	11319	11324	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
93	NC_017780	ATA	2	6	11351	11356	66.67 %	33.33 %	0 %	0 %	Non-Coding
94	NC_017780	TGA	2	6	11703	11708	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
95	NC_017780	TAA	2	6	11715	11720	66.67 %	33.33 %	0 %	0 %	Non-Coding
96	NC_017780	TTA	2	6	11722	11727	33.33 %	66.67 %	0 %	0 %	Non-Coding
97	NC_017780	TAT	2	6	11760	11765	33.33 %	66.67 %	0 %	0 %	Non-Coding
98	NC_017780	ATA	2	6	11789	11794	66.67 %	33.33 %	0 %	0 %	Non-Coding
99	NC_017780	TGC	2	6	11838	11843	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
100	NC_017780	TAA	2	6	11883	11888	66.67 %	33.33 %	0 %	0 %	Non-Coding
101	NC_017780	GAT	2	6	11893	11898	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
102	NC_017780	TAT	2	6	11932	11937	33.33 %	66.67 %	0 %	0 %	Non-Coding
103	NC_017780	TTA	2	6	12166	12171	33.33 %	66.67 %	0 %	0 %	Non-Coding
104	NC_017780	AAT	2	6	12181	12186	66.67 %	33.33 %	0 %	0 %	Non-Coding
105	NC_017780	GAT	2	6	12331	12336	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
106	NC_017780	AGA	2	6	12465	12470	66.67 %	0 %	33.33 %	0 %	Non-Coding
107	NC_017780	GAA	2	6	12532	12537	66.67 %	0 %	33.33 %	0 %	Non-Coding
108	NC_017780	TCT	3	9	12583	12591	0 %	66.67 %	0 %	33.33 %	Non-Coding
109	NC_017780	ATG	2	6	12613	12618	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
110	NC_017780	TTA	2	6	12672	12677	33.33 %	66.67 %	0 %	0 %	Non-Coding
111	NC_017780	TTA	2	6	12862	12867	33.33 %	66.67 %	0 %	0 %	Non-Coding
112	NC_017780	AGA	2	6	13292	13297	66.67 %	0 %	33.33 %	0 %	Non-Coding
113	NC_017780	AAG	2	6	13325	13330	66.67 %	0 %	33.33 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.