MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Borrelia burgdorferi JD1 plasmid JD1 cp32-9

Total Repeats: 69

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_017397	TAA	2	6	46	51	66.67 %	33.33 %	0 %	0 %	Non-Coding
2	NC_017397	AGG	2	6	3359	3364	33.33 %	0 %	66.67 %	0 %	Non-Coding
3	NC_017397	GGA	2	6	3954	3959	33.33 %	0 %	66.67 %	0 %	Non-Coding
4	NC_017397	ATA	2	6	16532	16537	66.67 %	33.33 %	0 %	0 %	Non-Coding
5	NC_017397	CTA	2	6	17026	17031	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
6	NC_017397	ATA	2	6	17057	17062	66.67 %	33.33 %	0 %	0 %	Non-Coding
7	NC_017397	TAA	3	9	17108	17116	66.67 %	33.33 %	0 %	0 %	Non-Coding
8	NC_017397	TGC	2	6	17614	17619	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
9	NC_017397	TCA	2	6	17627	17632	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
10	NC_017397	TAT	2	6	17739	17744	33.33 %	66.67 %	0 %	0 %	Non-Coding
11	NC_017397	ATC	2	6	17848	17853	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
12	NC_017397	ATT	2	6	17857	17862	33.33 %	66.67 %	0 %	0 %	Non-Coding
13	NC_017397	AAT	2	6	17896	17901	66.67 %	33.33 %	0 %	0 %	Non-Coding
14	NC_017397	TAT	2	6	17910	17915	33.33 %	66.67 %	0 %	0 %	Non-Coding
15	NC_017397	TGT	2	6	17920	17925	0 %	66.67 %	33.33 %	0 %	Non-Coding
16	NC_017397	CTT	2	6	17961	17966	0 %	66.67 %	0 %	33.33 %	Non-Coding
17	NC_017397	TAA	3	9	17978	17986	66.67 %	33.33 %	0 %	0 %	Non-Coding
18	NC_017397	TAA	2	6	18444	18449	66.67 %	33.33 %	0 %	0 %	Non-Coding
19	NC_017397	ATT	2	6	18583	18588	33.33 %	66.67 %	0 %	0 %	Non-Coding
20	NC_017397	ATT	3	9	18601	18609	33.33 %	66.67 %	0 %	0 %	Non-Coding
21	NC_017397	TCC	2	6	18633	18638	0 %	33.33 %	0 %	66.67 %	Non-Coding
22	NC_017397	TAA	2	6	18651	18656	66.67 %	33.33 %	0 %	0 %	Non-Coding
23	NC_017397	CTT	2	6	18690	18695	0 %	66.67 %	0 %	33.33 %	Non-Coding
24	NC_017397	TAC	2	6	18816	18821	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
25	NC_017397	TAG	2	6	18827	18832	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
26	NC_017397	TAA	2	6	18906	18911	66.67 %	33.33 %	0 %	0 %	Non-Coding
27	NC_017397	TTC	2	6	22117	22122	0 %	66.67 %	0 %	33.33 %	Non-Coding
28	NC_017397	AAT	2	6	22160	22165	66.67 %	33.33 %	0 %	0 %	Non-Coding
29	NC_017397	AGA	2	6	22228	22233	66.67 %	0 %	33.33 %	0 %	Non-Coding
30	NC_017397	AGA	2	6	22261	22266	66.67 %	0 %	33.33 %	0 %	Non-Coding
31	NC_017397	ATA	2	6	22432	22437	66.67 %	33.33 %	0 %	0 %	Non-Coding
32	NC_017397	TAA	2	6	22495	22500	66.67 %	33.33 %	0 %	0 %	Non-Coding
33	NC_017397	ATT	2	6	22521	22526	33.33 %	66.67 %	0 %	0 %	Non-Coding
34	NC_017397	TAA	2	6	22582	22587	66.67 %	33.33 %	0 %	0 %	Non-Coding
35	NC_017397	TTG	2	6	22705	22710	0 %	66.67 %	33.33 %	0 %	Non-Coding
36	NC_017397	AAT	2	6	22724	22729	66.67 %	33.33 %	0 %	0 %	Non-Coding
37	NC_017397	TAA	2	6	22733	22738	66.67 %	33.33 %	0 %	0 %	Non-Coding
38	NC_017397	TTA	2	6	22762	22767	33.33 %	66.67 %	0 %	0 %	Non-Coding
39	NC_017397	TAA	2	6	22788	22793	66.67 %	33.33 %	0 %	0 %	Non-Coding
40	NC_017397	TAA	2	6	22809	22814	66.67 %	33.33 %	0 %	0 %	Non-Coding
41	NC_017397	AAT	2	6	22836	22841	66.67 %	33.33 %	0 %	0 %	Non-Coding
42	NC_017397	GGA	2	6	23035	23040	33.33 %	0 %	66.67 %	0 %	Non-Coding
43	NC_017397	AAT	3	9	23064	23072	66.67 %	33.33 %	0 %	0 %	Non-Coding
44	NC_017397	CAA	2	6	23115	23120	66.67 %	0 %	0 %	33.33 %	Non-Coding
45	NC_017397	TCT	2	6	23154	23159	0 %	66.67 %	0 %	33.33 %	Non-Coding
46	NC_017397	AGT	2	6	23214	23219	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
47	NC_017397	TTG	2	6	23311	23316	0 %	66.67 %	33.33 %	0 %	Non-Coding
48	NC_017397	ATA	2	6	23461	23466	66.67 %	33.33 %	0 %	0 %	Non-Coding
49	NC_017397	ATT	2	6	23515	23520	33.33 %	66.67 %	0 %	0 %	Non-Coding
50	NC_017397	CAA	2	6	23557	23562	66.67 %	0 %	0 %	33.33 %	Non-Coding
51	NC_017397	TAA	3	9	23579	23587	66.67 %	33.33 %	0 %	0 %	Non-Coding
52	NC_017397	AGT	2	6	23637	23642	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
53	NC_017397	AGT	2	6	23679	23684	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
54	NC_017397	TGC	2	6	23771	23776	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
55	NC_017397	TAA	2	6	23837	23842	66.67 %	33.33 %	0 %	0 %	Non-Coding
56	NC_017397	TTG	2	6	23944	23949	0 %	66.67 %	33.33 %	0 %	Non-Coding
57	NC_017397	TAG	2	6	23956	23961	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
58	NC_017397	AGC	2	6	24214	24219	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
59	NC_017397	CAA	2	6	24301	24306	66.67 %	0 %	0 %	33.33 %	Non-Coding
60	NC_017397	AAT	2	6	24345	24350	66.67 %	33.33 %	0 %	0 %	Non-Coding
61	NC_017397	AAT	2	6	24393	24398	66.67 %	33.33 %	0 %	0 %	Non-Coding
62	NC_017397	TAA	2	6	25682	25687	66.67 %	33.33 %	0 %	0 %	Non-Coding
63	NC_017397	AGA	2	6	25787	25792	66.67 %	0 %	33.33 %	0 %	Non-Coding
64	NC_017397	ATT	2	6	26015	26020	33.33 %	66.67 %	0 %	0 %	Non-Coding
65	NC_017397	TGT	2	6	26024	26029	0 %	66.67 %	33.33 %	0 %	Non-Coding
66	NC_017397	AAT	2	6	26714	26719	66.67 %	33.33 %	0 %	0 %	Non-Coding
67	NC_017397	GTT	2	6	27947	27952	0 %	66.67 %	33.33 %	0 %	Non-Coding
68	NC_017397	TAA	2	6	28649	28654	66.67 %	33.33 %	0 %	0 %	Non-Coding
69	NC_017397	ATA	2	6	28697	28702	66.67 %	33.33 %	0 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.