MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Borrelia burgdorferi JD1 plasmid JD1 cp32-11

Total Repeats: 47

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_017393	TAA	2	6	46	51	66.67 %	33.33 %	0 %	0 %	Non-Coding
2	NC_017393	GGA	2	6	3958	3963	33.33 %	0 %	66.67 %	0 %	Non-Coding
3	NC_017393	TGA	2	6	15554	15559	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
4	NC_017393	TGA	2	6	15726	15731	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
5	NC_017393	ATA	2	6	17232	17237	66.67 %	33.33 %	0 %	0 %	Non-Coding
6	NC_017393	TAA	2	6	17261	17266	66.67 %	33.33 %	0 %	0 %	Non-Coding
7	NC_017393	TAA	3	9	17283	17291	66.67 %	33.33 %	0 %	0 %	Non-Coding
8	NC_017393	ATT	2	6	17961	17966	33.33 %	66.67 %	0 %	0 %	Non-Coding
9	NC_017393	AGC	2	6	17975	17980	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
10	NC_017393	TAA	2	6	19043	19048	66.67 %	33.33 %	0 %	0 %	Non-Coding
11	NC_017393	CTA	2	6	19136	19141	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
12	NC_017393	TAA	2	6	19311	19316	66.67 %	33.33 %	0 %	0 %	Non-Coding
13	NC_017393	TAA	2	6	19374	19379	66.67 %	33.33 %	0 %	0 %	Non-Coding
14	NC_017393	ATT	2	6	19383	19388	33.33 %	66.67 %	0 %	0 %	Non-Coding
15	NC_017393	TGA	2	6	22983	22988	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
16	NC_017393	TAT	2	6	22993	22998	33.33 %	66.67 %	0 %	0 %	Non-Coding
17	NC_017393	ATT	2	6	23128	23133	33.33 %	66.67 %	0 %	0 %	Non-Coding
18	NC_017393	ATT	2	6	23149	23154	33.33 %	66.67 %	0 %	0 %	Non-Coding
19	NC_017393	TAA	2	6	23156	23161	66.67 %	33.33 %	0 %	0 %	Non-Coding
20	NC_017393	TTA	2	6	23185	23190	33.33 %	66.67 %	0 %	0 %	Non-Coding
21	NC_017393	AAT	2	6	23192	23197	66.67 %	33.33 %	0 %	0 %	Non-Coding
22	NC_017393	ATA	2	6	23317	23322	66.67 %	33.33 %	0 %	0 %	Non-Coding
23	NC_017393	AAT	3	9	23452	23460	66.67 %	33.33 %	0 %	0 %	Non-Coding
24	NC_017393	CAA	2	6	23506	23511	66.67 %	0 %	0 %	33.33 %	Non-Coding
25	NC_017393	TCT	2	6	23545	23550	0 %	66.67 %	0 %	33.33 %	Non-Coding
26	NC_017393	AGT	2	6	23605	23610	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
27	NC_017393	TTG	2	6	23702	23707	0 %	66.67 %	33.33 %	0 %	Non-Coding
28	NC_017393	GTG	2	6	23708	23713	0 %	33.33 %	66.67 %	0 %	Non-Coding
29	NC_017393	GAA	2	6	23776	23781	66.67 %	0 %	33.33 %	0 %	Non-Coding
30	NC_017393	ATA	2	6	23852	23857	66.67 %	33.33 %	0 %	0 %	Non-Coding
31	NC_017393	ATT	2	6	23906	23911	33.33 %	66.67 %	0 %	0 %	Non-Coding
32	NC_017393	CAA	2	6	23948	23953	66.67 %	0 %	0 %	33.33 %	Non-Coding
33	NC_017393	TAA	3	9	23970	23978	66.67 %	33.33 %	0 %	0 %	Non-Coding
34	NC_017393	AGT	2	6	24028	24033	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
35	NC_017393	TGC	2	6	24162	24167	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
36	NC_017393	TAA	2	6	24228	24233	66.67 %	33.33 %	0 %	0 %	Non-Coding
37	NC_017393	TTG	2	6	24335	24340	0 %	66.67 %	33.33 %	0 %	Non-Coding
38	NC_017393	TAG	2	6	24347	24352	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
39	NC_017393	ACT	2	6	24684	24689	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
40	NC_017393	CAA	2	6	24692	24697	66.67 %	0 %	0 %	33.33 %	Non-Coding
41	NC_017393	AGG	2	6	24798	24803	33.33 %	0 %	66.67 %	0 %	Non-Coding
42	NC_017393	AGA	2	6	26179	26184	66.67 %	0 %	33.33 %	0 %	Non-Coding
43	NC_017393	GAA	2	6	27161	27166	66.67 %	0 %	33.33 %	0 %	Non-Coding
44	NC_017393	TAA	2	6	27173	27178	66.67 %	33.33 %	0 %	0 %	Non-Coding
45	NC_017393	TAA	2	6	27854	27859	66.67 %	33.33 %	0 %	0 %	Non-Coding
46	NC_017393	ATA	2	6	27902	27907	66.67 %	33.33 %	0 %	0 %	Non-Coding
47	NC_017393	GTT	2	6	27954	27959	0 %	66.67 %	33.33 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.