MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Bacillus thuringiensis str. Al Hakam plasmid pALH1

Total Repeats: 181

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_008598	TAA	2	6	32	37	66.67 %	33.33 %	0 %	0 %	Non-Coding
2	NC_008598	CCA	2	6	152	157	33.33 %	0 %	0 %	66.67 %	Non-Coding
3	NC_008598	AAC	2	6	195	200	66.67 %	0 %	0 %	33.33 %	Non-Coding
4	NC_008598	CCA	2	6	308	313	33.33 %	0 %	0 %	66.67 %	Non-Coding
5	NC_008598	ACG	2	6	433	438	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
6	NC_008598	AAT	2	6	559	564	66.67 %	33.33 %	0 %	0 %	Non-Coding
7	NC_008598	CCA	2	6	598	603	33.33 %	0 %	0 %	66.67 %	Non-Coding
8	NC_008598	GCT	2	6	618	623	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
9	NC_008598	TAT	2	6	1651	1656	33.33 %	66.67 %	0 %	0 %	Non-Coding
10	NC_008598	CAT	2	6	1693	1698	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
11	NC_008598	ATT	2	6	1759	1764	33.33 %	66.67 %	0 %	0 %	Non-Coding
12	NC_008598	TAT	2	6	1766	1771	33.33 %	66.67 %	0 %	0 %	Non-Coding
13	NC_008598	TTA	2	6	1870	1875	33.33 %	66.67 %	0 %	0 %	Non-Coding
14	NC_008598	GAA	2	6	2083	2088	66.67 %	0 %	33.33 %	0 %	Non-Coding
15	NC_008598	ATA	2	6	3623	3628	66.67 %	33.33 %	0 %	0 %	Non-Coding
16	NC_008598	CAT	2	6	3721	3726	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
17	NC_008598	AGG	2	6	3820	3825	33.33 %	0 %	66.67 %	0 %	Non-Coding
18	NC_008598	AAC	2	6	4018	4023	66.67 %	0 %	0 %	33.33 %	Non-Coding
19	NC_008598	TCC	2	6	4312	4317	0 %	33.33 %	0 %	66.67 %	Non-Coding
20	NC_008598	CCA	2	6	4804	4809	33.33 %	0 %	0 %	66.67 %	Non-Coding
21	NC_008598	TCT	2	6	5004	5009	0 %	66.67 %	0 %	33.33 %	Non-Coding
22	NC_008598	ACG	2	6	5086	5091	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
23	NC_008598	TTC	2	6	5206	5211	0 %	66.67 %	0 %	33.33 %	Non-Coding
24	NC_008598	TAA	2	6	5313	5318	66.67 %	33.33 %	0 %	0 %	Non-Coding
25	NC_008598	ACC	2	6	5401	5406	33.33 %	0 %	0 %	66.67 %	Non-Coding
26	NC_008598	ATA	3	9	5721	5729	66.67 %	33.33 %	0 %	0 %	Non-Coding
27	NC_008598	TTG	2	6	6252	6257	0 %	66.67 %	33.33 %	0 %	Non-Coding
28	NC_008598	CCA	2	6	6288	6293	33.33 %	0 %	0 %	66.67 %	Non-Coding
29	NC_008598	TCC	2	6	6956	6961	0 %	33.33 %	0 %	66.67 %	Non-Coding
30	NC_008598	ATC	2	6	6992	6997	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
31	NC_008598	ATT	2	6	7155	7160	33.33 %	66.67 %	0 %	0 %	Non-Coding
32	NC_008598	TTG	2	6	7161	7166	0 %	66.67 %	33.33 %	0 %	Non-Coding
33	NC_008598	ATC	3	9	7300	7308	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
34	NC_008598	AAT	2	6	7584	7589	66.67 %	33.33 %	0 %	0 %	Non-Coding
35	NC_008598	GCT	2	6	7678	7683	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
36	NC_008598	TTC	2	6	7732	7737	0 %	66.67 %	0 %	33.33 %	Non-Coding
37	NC_008598	ATC	2	6	7798	7803	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
38	NC_008598	GTT	2	6	7897	7902	0 %	66.67 %	33.33 %	0 %	Non-Coding
39	NC_008598	CTT	2	6	7982	7987	0 %	66.67 %	0 %	33.33 %	Non-Coding
40	NC_008598	AAG	2	6	8312	8317	66.67 %	0 %	33.33 %	0 %	Non-Coding
41	NC_008598	CTT	2	6	8340	8345	0 %	66.67 %	0 %	33.33 %	Non-Coding
42	NC_008598	TAA	2	6	8387	8392	66.67 %	33.33 %	0 %	0 %	Non-Coding
43	NC_008598	GAT	2	6	8440	8445	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
44	NC_008598	TAC	3	9	8538	8546	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
45	NC_008598	TGT	2	6	8624	8629	0 %	66.67 %	33.33 %	0 %	Non-Coding
46	NC_008598	TAA	2	6	8654	8659	66.67 %	33.33 %	0 %	0 %	Non-Coding
47	NC_008598	ATT	2	6	8746	8751	33.33 %	66.67 %	0 %	0 %	Non-Coding
48	NC_008598	CAA	2	6	8835	8840	66.67 %	0 %	0 %	33.33 %	Non-Coding
49	NC_008598	TTC	2	6	10400	10405	0 %	66.67 %	0 %	33.33 %	Non-Coding
50	NC_008598	TTG	2	6	11216	11221	0 %	66.67 %	33.33 %	0 %	Non-Coding
51	NC_008598	GAC	2	6	14735	14740	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
52	NC_008598	TCC	2	6	15943	15948	0 %	33.33 %	0 %	66.67 %	Non-Coding
53	NC_008598	TCC	2	6	16106	16111	0 %	33.33 %	0 %	66.67 %	Non-Coding
54	NC_008598	AGA	2	6	16122	16127	66.67 %	0 %	33.33 %	0 %	Non-Coding
55	NC_008598	ATA	2	6	16153	16158	66.67 %	33.33 %	0 %	0 %	Non-Coding
56	NC_008598	CGT	2	6	16162	16167	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
57	NC_008598	TCA	2	6	16169	16174	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
58	NC_008598	ATA	2	6	16396	16401	66.67 %	33.33 %	0 %	0 %	Non-Coding
59	NC_008598	TCT	2	6	16411	16416	0 %	66.67 %	0 %	33.33 %	Non-Coding
60	NC_008598	GCT	2	6	16424	16429	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
61	NC_008598	CAT	2	6	16549	16554	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
62	NC_008598	TCC	2	6	17560	17565	0 %	33.33 %	0 %	66.67 %	Non-Coding
63	NC_008598	TAT	2	6	17584	17589	33.33 %	66.67 %	0 %	0 %	Non-Coding
64	NC_008598	GTA	2	6	17651	17656	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
65	NC_008598	TAT	2	6	17684	17689	33.33 %	66.67 %	0 %	0 %	Non-Coding
66	NC_008598	AGA	2	6	18073	18078	66.67 %	0 %	33.33 %	0 %	Non-Coding
67	NC_008598	TCT	2	6	18097	18102	0 %	66.67 %	0 %	33.33 %	Non-Coding
68	NC_008598	TCA	2	6	18135	18140	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
69	NC_008598	TCC	2	6	18159	18164	0 %	33.33 %	0 %	66.67 %	Non-Coding
70	NC_008598	TCC	2	6	18238	18243	0 %	33.33 %	0 %	66.67 %	Non-Coding
71	NC_008598	CAA	2	6	18276	18281	66.67 %	0 %	0 %	33.33 %	Non-Coding
72	NC_008598	GCC	3	9	18395	18403	0 %	0 %	33.33 %	66.67 %	Non-Coding
73	NC_008598	CAT	2	6	18416	18421	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
74	NC_008598	TTC	2	6	18458	18463	0 %	66.67 %	0 %	33.33 %	Non-Coding
75	NC_008598	CAG	2	6	18475	18480	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
76	NC_008598	TAA	2	6	18503	18508	66.67 %	33.33 %	0 %	0 %	Non-Coding
77	NC_008598	TCT	2	6	18529	18534	0 %	66.67 %	0 %	33.33 %	Non-Coding
78	NC_008598	ATA	2	6	19944	19949	66.67 %	33.33 %	0 %	0 %	Non-Coding
79	NC_008598	GTT	2	6	19976	19981	0 %	66.67 %	33.33 %	0 %	Non-Coding
80	NC_008598	ACA	2	6	20021	20026	66.67 %	0 %	0 %	33.33 %	Non-Coding
81	NC_008598	ATT	2	6	20206	20211	33.33 %	66.67 %	0 %	0 %	Non-Coding
82	NC_008598	TGG	2	6	21534	21539	0 %	33.33 %	66.67 %	0 %	Non-Coding
83	NC_008598	TAT	2	6	21549	21554	33.33 %	66.67 %	0 %	0 %	Non-Coding
84	NC_008598	TTA	2	6	21571	21576	33.33 %	66.67 %	0 %	0 %	Non-Coding
85	NC_008598	GGT	2	6	21580	21585	0 %	33.33 %	66.67 %	0 %	Non-Coding
86	NC_008598	AAG	2	6	21687	21692	66.67 %	0 %	33.33 %	0 %	Non-Coding
87	NC_008598	ATG	2	6	21715	21720	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
88	NC_008598	GCT	2	6	21727	21732	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
89	NC_008598	TGG	2	6	21735	21740	0 %	33.33 %	66.67 %	0 %	Non-Coding
90	NC_008598	TTC	2	6	21760	21765	0 %	66.67 %	0 %	33.33 %	Non-Coding
91	NC_008598	TAT	3	9	21779	21787	33.33 %	66.67 %	0 %	0 %	Non-Coding
92	NC_008598	AAT	2	6	21916	21921	66.67 %	33.33 %	0 %	0 %	Non-Coding
93	NC_008598	TAT	2	6	21941	21946	33.33 %	66.67 %	0 %	0 %	Non-Coding
94	NC_008598	AAT	2	6	22578	22583	66.67 %	33.33 %	0 %	0 %	Non-Coding
95	NC_008598	ATA	2	6	22825	22830	66.67 %	33.33 %	0 %	0 %	Non-Coding
96	NC_008598	ATT	2	6	22853	22858	33.33 %	66.67 %	0 %	0 %	Non-Coding
97	NC_008598	GGA	2	6	22880	22885	33.33 %	0 %	66.67 %	0 %	Non-Coding
98	NC_008598	TGC	2	6	22980	22985	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
99	NC_008598	TAT	2	6	23064	23069	33.33 %	66.67 %	0 %	0 %	Non-Coding
100	NC_008598	TGT	2	6	23141	23146	0 %	66.67 %	33.33 %	0 %	Non-Coding
101	NC_008598	TAA	2	6	24214	24219	66.67 %	33.33 %	0 %	0 %	Non-Coding
102	NC_008598	TTA	2	6	24220	24225	33.33 %	66.67 %	0 %	0 %	Non-Coding
103	NC_008598	TTA	2	6	24247	24252	33.33 %	66.67 %	0 %	0 %	Non-Coding
104	NC_008598	ATT	2	6	24312	24317	33.33 %	66.67 %	0 %	0 %	Non-Coding
105	NC_008598	TTA	2	6	24318	24323	33.33 %	66.67 %	0 %	0 %	Non-Coding
106	NC_008598	TTA	2	6	24430	24435	33.33 %	66.67 %	0 %	0 %	Non-Coding
107	NC_008598	TAA	2	6	24502	24507	66.67 %	33.33 %	0 %	0 %	Non-Coding
108	NC_008598	TTA	2	6	24531	24536	33.33 %	66.67 %	0 %	0 %	Non-Coding
109	NC_008598	TTG	2	6	24561	24566	0 %	66.67 %	33.33 %	0 %	Non-Coding
110	NC_008598	ATT	2	6	24639	24644	33.33 %	66.67 %	0 %	0 %	Non-Coding
111	NC_008598	CAG	2	6	24675	24680	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
112	NC_008598	GGA	2	6	24801	24806	33.33 %	0 %	66.67 %	0 %	Non-Coding
113	NC_008598	GCT	2	6	24819	24824	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
114	NC_008598	ATT	2	6	24881	24886	33.33 %	66.67 %	0 %	0 %	Non-Coding
115	NC_008598	AGA	2	6	24926	24931	66.67 %	0 %	33.33 %	0 %	Non-Coding
116	NC_008598	GGT	2	6	24969	24974	0 %	33.33 %	66.67 %	0 %	Non-Coding
117	NC_008598	TTA	2	6	25243	25248	33.33 %	66.67 %	0 %	0 %	Non-Coding
118	NC_008598	AAT	2	6	25265	25270	66.67 %	33.33 %	0 %	0 %	Non-Coding
119	NC_008598	ATA	2	6	25476	25481	66.67 %	33.33 %	0 %	0 %	Non-Coding
120	NC_008598	ATT	2	6	25504	25509	33.33 %	66.67 %	0 %	0 %	Non-Coding
121	NC_008598	GGA	2	6	25531	25536	33.33 %	0 %	66.67 %	0 %	Non-Coding
122	NC_008598	ATC	2	6	27139	27144	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
123	NC_008598	AGT	2	6	27170	27175	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
124	NC_008598	ACC	2	6	27552	27557	33.33 %	0 %	0 %	66.67 %	Non-Coding
125	NC_008598	AGA	2	6	27607	27612	66.67 %	0 %	33.33 %	0 %	Non-Coding
126	NC_008598	TCC	2	6	27700	27705	0 %	33.33 %	0 %	66.67 %	Non-Coding
127	NC_008598	AGC	2	6	27715	27720	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
128	NC_008598	AAG	2	6	27935	27940	66.67 %	0 %	33.33 %	0 %	Non-Coding
129	NC_008598	GTT	2	6	27958	27963	0 %	66.67 %	33.33 %	0 %	Non-Coding
130	NC_008598	GTG	2	6	27972	27977	0 %	33.33 %	66.67 %	0 %	Non-Coding
131	NC_008598	CTT	2	6	27983	27988	0 %	66.67 %	0 %	33.33 %	Non-Coding
132	NC_008598	GTG	2	6	28031	28036	0 %	33.33 %	66.67 %	0 %	Non-Coding
133	NC_008598	TTG	2	6	28206	28211	0 %	66.67 %	33.33 %	0 %	Non-Coding
134	NC_008598	TAC	2	6	28214	28219	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
135	NC_008598	ACA	2	6	28223	28228	66.67 %	0 %	0 %	33.33 %	Non-Coding
136	NC_008598	AAT	2	6	28269	28274	66.67 %	33.33 %	0 %	0 %	Non-Coding
137	NC_008598	CTA	2	6	28372	28377	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
138	NC_008598	TTA	2	6	28460	28465	33.33 %	66.67 %	0 %	0 %	Non-Coding
139	NC_008598	TTA	2	6	29926	29931	33.33 %	66.67 %	0 %	0 %	Non-Coding
140	NC_008598	TTC	2	6	30801	30806	0 %	66.67 %	0 %	33.33 %	Non-Coding
141	NC_008598	AAT	2	6	30813	30818	66.67 %	33.33 %	0 %	0 %	Non-Coding
142	NC_008598	CAT	2	6	30854	30859	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
143	NC_008598	TTA	2	6	30865	30870	33.33 %	66.67 %	0 %	0 %	Non-Coding
144	NC_008598	ATT	2	6	30889	30894	33.33 %	66.67 %	0 %	0 %	Non-Coding
145	NC_008598	ATA	2	6	31961	31966	66.67 %	33.33 %	0 %	0 %	Non-Coding
146	NC_008598	AAG	2	6	33107	33112	66.67 %	0 %	33.33 %	0 %	Non-Coding
147	NC_008598	TCT	2	6	33138	33143	0 %	66.67 %	0 %	33.33 %	Non-Coding
148	NC_008598	TTC	2	6	33392	33397	0 %	66.67 %	0 %	33.33 %	Non-Coding
149	NC_008598	TCT	2	6	33416	33421	0 %	66.67 %	0 %	33.33 %	Non-Coding
150	NC_008598	CCT	2	6	34030	34035	0 %	33.33 %	0 %	66.67 %	Non-Coding
151	NC_008598	ATG	2	6	34050	34055	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
152	NC_008598	TGT	2	6	34517	34522	0 %	66.67 %	33.33 %	0 %	Non-Coding
153	NC_008598	TAA	2	6	34527	34532	66.67 %	33.33 %	0 %	0 %	Non-Coding
154	NC_008598	TTA	2	6	34664	34669	33.33 %	66.67 %	0 %	0 %	Non-Coding
155	NC_008598	GGC	2	6	36493	36498	0 %	0 %	66.67 %	33.33 %	Non-Coding
156	NC_008598	ATT	2	6	36578	36583	33.33 %	66.67 %	0 %	0 %	Non-Coding
157	NC_008598	AGG	2	6	36648	36653	33.33 %	0 %	66.67 %	0 %	Non-Coding
158	NC_008598	AAG	3	9	38034	38042	66.67 %	0 %	33.33 %	0 %	Non-Coding
159	NC_008598	TAA	2	6	38073	38078	66.67 %	33.33 %	0 %	0 %	Non-Coding
160	NC_008598	TCA	2	6	38110	38115	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
161	NC_008598	TGC	2	6	38980	38985	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
162	NC_008598	TCC	2	6	40117	40122	0 %	33.33 %	0 %	66.67 %	Non-Coding
163	NC_008598	TAT	2	6	41773	41778	33.33 %	66.67 %	0 %	0 %	Non-Coding
164	NC_008598	TTG	2	6	41796	41801	0 %	66.67 %	33.33 %	0 %	Non-Coding
165	NC_008598	CCT	2	6	47525	47530	0 %	33.33 %	0 %	66.67 %	Non-Coding
166	NC_008598	TTG	2	6	47833	47838	0 %	66.67 %	33.33 %	0 %	Non-Coding
167	NC_008598	GAC	2	6	49331	49336	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
168	NC_008598	CAT	2	6	49359	49364	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
169	NC_008598	CTG	2	6	49434	49439	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
170	NC_008598	CCA	2	6	49498	49503	33.33 %	0 %	0 %	66.67 %	Non-Coding
171	NC_008598	TCT	2	6	49557	49562	0 %	66.67 %	0 %	33.33 %	Non-Coding
172	NC_008598	TCC	2	6	51625	51630	0 %	33.33 %	0 %	66.67 %	Non-Coding
173	NC_008598	CCT	2	6	52826	52831	0 %	33.33 %	0 %	66.67 %	Non-Coding
174	NC_008598	GCT	2	6	55320	55325	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
175	NC_008598	CAC	2	6	55432	55437	33.33 %	0 %	0 %	66.67 %	Non-Coding
176	NC_008598	CAG	2	6	55494	55499	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
177	NC_008598	ATT	2	6	55562	55567	33.33 %	66.67 %	0 %	0 %	Non-Coding
178	NC_008598	AGC	2	6	55619	55624	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
179	NC_008598	GTA	2	6	55685	55690	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
180	NC_008598	CTT	2	6	55759	55764	0 %	66.67 %	0 %	33.33 %	Non-Coding
181	NC_008598	AGC	2	6	55913	55918	33.33 %	0 %	33.33 %	33.33 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.