MICAS: Microsatellite Analysis Server 3.0

Hexa-nucleotide Non-Coding Repeats of Buchnera aphidicola str. Sg (Schizaphis graminum) chromosome

Total Repeats: 82

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_004061	TTATTT	2	12	5839	5850	16.67 %	83.33 %	0 %	0 %	Non-Coding
2	NC_004061	TTTTCT	2	12	23394	23405	0 %	83.33 %	0 %	16.67 %	Non-Coding
3	NC_004061	ATAAAA	2	12	26207	26218	83.33 %	16.67 %	0 %	0 %	Non-Coding
4	NC_004061	TTTTTA	2	12	29512	29523	16.67 %	83.33 %	0 %	0 %	Non-Coding
5	NC_004061	ATTTTT	2	12	35651	35662	16.67 %	83.33 %	0 %	0 %	Non-Coding
6	NC_004061	ATTTTT	2	12	52440	52451	16.67 %	83.33 %	0 %	0 %	Non-Coding
7	NC_004061	ATTTTT	2	12	66229	66240	16.67 %	83.33 %	0 %	0 %	Non-Coding
8	NC_004061	ATTTTT	2	12	72350	72361	16.67 %	83.33 %	0 %	0 %	Non-Coding
9	NC_004061	AAATTT	2	12	87601	87612	50 %	50 %	0 %	0 %	Non-Coding
10	NC_004061	ATATTA	3	18	88262	88279	50 %	50 %	0 %	0 %	Non-Coding
11	NC_004061	TATTTT	2	12	101801	101812	16.67 %	83.33 %	0 %	0 %	Non-Coding
12	NC_004061	ATTTTA	2	12	111682	111693	33.33 %	66.67 %	0 %	0 %	Non-Coding
13	NC_004061	ATTTCA	2	12	111779	111790	33.33 %	50 %	0 %	16.67 %	Non-Coding
14	NC_004061	TTATTT	2	12	128154	128165	16.67 %	83.33 %	0 %	0 %	Non-Coding
15	NC_004061	TAAAAA	2	12	143775	143786	83.33 %	16.67 %	0 %	0 %	Non-Coding
16	NC_004061	ATATTT	2	12	155008	155019	33.33 %	66.67 %	0 %	0 %	Non-Coding
17	NC_004061	TATTAA	2	12	166330	166341	50 %	50 %	0 %	0 %	Non-Coding
18	NC_004061	ATAATT	2	12	182710	182721	50 %	50 %	0 %	0 %	Non-Coding
19	NC_004061	TAAATA	2	12	190361	190372	66.67 %	33.33 %	0 %	0 %	Non-Coding
20	NC_004061	ATTTTT	2	12	212755	212766	16.67 %	83.33 %	0 %	0 %	Non-Coding
21	NC_004061	ATTAAA	2	12	218318	218329	66.67 %	33.33 %	0 %	0 %	Non-Coding
22	NC_004061	ATTTTT	2	12	219534	219545	16.67 %	83.33 %	0 %	0 %	Non-Coding
23	NC_004061	TAAATA	2	12	224684	224695	66.67 %	33.33 %	0 %	0 %	Non-Coding
24	NC_004061	AATTTT	2	12	232834	232845	33.33 %	66.67 %	0 %	0 %	Non-Coding
25	NC_004061	TTTTAA	2	12	236216	236227	33.33 %	66.67 %	0 %	0 %	Non-Coding
26	NC_004061	TAATGA	2	12	242505	242516	50 %	33.33 %	16.67 %	0 %	Non-Coding
27	NC_004061	AATCCT	2	12	242566	242577	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
28	NC_004061	TTTGAT	2	12	242614	242625	16.67 %	66.67 %	16.67 %	0 %	Non-Coding
29	NC_004061	TTTTTC	2	12	243426	243437	0 %	83.33 %	0 %	16.67 %	Non-Coding
30	NC_004061	ATTTTT	2	12	243959	243970	16.67 %	83.33 %	0 %	0 %	Non-Coding
31	NC_004061	GTTGAA	2	12	245138	245149	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
32	NC_004061	AAATGA	2	12	249183	249194	66.67 %	16.67 %	16.67 %	0 %	Non-Coding
33	NC_004061	TCATCT	2	12	252547	252558	16.67 %	50 %	0 %	33.33 %	Non-Coding
34	NC_004061	TATTAA	2	12	259460	259471	50 %	50 %	0 %	0 %	Non-Coding
35	NC_004061	AATTAA	2	12	270015	270026	66.67 %	33.33 %	0 %	0 %	Non-Coding
36	NC_004061	TTTTAA	2	12	309508	309519	33.33 %	66.67 %	0 %	0 %	Non-Coding
37	NC_004061	ATTTTT	2	12	318251	318262	16.67 %	83.33 %	0 %	0 %	Non-Coding
38	NC_004061	AAATTA	2	12	322947	322958	66.67 %	33.33 %	0 %	0 %	Non-Coding
39	NC_004061	ATTTTT	2	12	323026	323037	16.67 %	83.33 %	0 %	0 %	Non-Coding
40	NC_004061	TTTTTA	2	12	323775	323786	16.67 %	83.33 %	0 %	0 %	Non-Coding
41	NC_004061	TCAATC	2	12	332484	332495	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
42	NC_004061	ATTTTA	2	12	339918	339929	33.33 %	66.67 %	0 %	0 %	Non-Coding
43	NC_004061	TTTATA	2	12	348418	348429	33.33 %	66.67 %	0 %	0 %	Non-Coding
44	NC_004061	TAAAAA	2	12	366363	366374	83.33 %	16.67 %	0 %	0 %	Non-Coding
45	NC_004061	TAAAAA	2	12	383577	383588	83.33 %	16.67 %	0 %	0 %	Non-Coding
46	NC_004061	AATTTT	2	12	391676	391687	33.33 %	66.67 %	0 %	0 %	Non-Coding
47	NC_004061	TAAAAA	2	12	412047	412058	83.33 %	16.67 %	0 %	0 %	Non-Coding
48	NC_004061	TATAAA	2	12	414363	414374	66.67 %	33.33 %	0 %	0 %	Non-Coding
49	NC_004061	CCATCA	2	12	421858	421869	33.33 %	16.67 %	0 %	50 %	Non-Coding
50	NC_004061	ATTTAT	2	12	427843	427854	33.33 %	66.67 %	0 %	0 %	Non-Coding
51	NC_004061	AAAAAT	2	12	430858	430869	83.33 %	16.67 %	0 %	0 %	Non-Coding
52	NC_004061	TAAATA	2	12	439347	439358	66.67 %	33.33 %	0 %	0 %	Non-Coding
53	NC_004061	ATTTTT	2	12	440151	440162	16.67 %	83.33 %	0 %	0 %	Non-Coding
54	NC_004061	TAAAAT	2	12	443305	443316	66.67 %	33.33 %	0 %	0 %	Non-Coding
55	NC_004061	TTTAAT	2	12	459557	459568	33.33 %	66.67 %	0 %	0 %	Non-Coding
56	NC_004061	TAATAT	2	12	460955	460966	50 %	50 %	0 %	0 %	Non-Coding
57	NC_004061	ATTTCT	2	12	461041	461052	16.67 %	66.67 %	0 %	16.67 %	Non-Coding
58	NC_004061	ATTTAT	2	12	461275	461286	33.33 %	66.67 %	0 %	0 %	Non-Coding
59	NC_004061	TATCAT	2	12	464535	464546	33.33 %	50 %	0 %	16.67 %	Non-Coding
60	NC_004061	CAGGAG	2	12	477258	477269	33.33 %	0 %	50 %	16.67 %	Non-Coding
61	NC_004061	TAATAT	2	12	491213	491224	50 %	50 %	0 %	0 %	Non-Coding
62	NC_004061	TTAAAA	2	12	519492	519503	66.67 %	33.33 %	0 %	0 %	Non-Coding
63	NC_004061	ATTTTT	2	12	528468	528479	16.67 %	83.33 %	0 %	0 %	Non-Coding
64	NC_004061	ATTTTT	2	12	536600	536611	16.67 %	83.33 %	0 %	0 %	Non-Coding
65	NC_004061	AAAATT	2	12	536696	536707	66.67 %	33.33 %	0 %	0 %	Non-Coding
66	NC_004061	ATTTTT	2	12	539608	539619	16.67 %	83.33 %	0 %	0 %	Non-Coding
67	NC_004061	TATTTA	2	12	540012	540023	33.33 %	66.67 %	0 %	0 %	Non-Coding
68	NC_004061	CAATTT	2	12	541235	541246	33.33 %	50 %	0 %	16.67 %	Non-Coding
69	NC_004061	AAAAAT	2	12	561090	561101	83.33 %	16.67 %	0 %	0 %	Non-Coding
70	NC_004061	AAAATT	2	12	566890	566901	66.67 %	33.33 %	0 %	0 %	Non-Coding
71	NC_004061	AAAAAT	2	12	579057	579068	83.33 %	16.67 %	0 %	0 %	Non-Coding
72	NC_004061	AATACA	2	12	582391	582402	66.67 %	16.67 %	0 %	16.67 %	Non-Coding
73	NC_004061	ATAAAA	2	12	583057	583068	83.33 %	16.67 %	0 %	0 %	Non-Coding
74	NC_004061	ATTTTT	2	12	584628	584639	16.67 %	83.33 %	0 %	0 %	Non-Coding
75	NC_004061	AATATA	2	12	592913	592924	66.67 %	33.33 %	0 %	0 %	Non-Coding
76	NC_004061	AGAACA	2	12	611333	611344	66.67 %	0 %	16.67 %	16.67 %	Non-Coding
77	NC_004061	TTAAAA	2	12	612136	612147	66.67 %	33.33 %	0 %	0 %	Non-Coding
78	NC_004061	ATAAAA	2	12	612500	612511	83.33 %	16.67 %	0 %	0 %	Non-Coding
79	NC_004061	ATAAAT	2	12	614997	615008	66.67 %	33.33 %	0 %	0 %	Non-Coding
80	NC_004061	ATAAAA	2	12	619627	619638	83.33 %	16.67 %	0 %	0 %	Non-Coding
81	NC_004061	AGAATT	2	12	624902	624913	50 %	33.33 %	16.67 %	0 %	Non-Coding
82	NC_004061	AGTTAA	2	12	628182	628193	50 %	33.33 %	16.67 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.