MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Borrelia burgdorferi B31 plasmid lp17

Total Repeats: 144

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_001849	AAT	2	6	120	125	66.67 %	33.33 %	0 %	0 %	Non-Coding
2	NC_001849	ATA	2	6	925	930	66.67 %	33.33 %	0 %	0 %	Non-Coding
3	NC_001849	AAC	2	6	953	958	66.67 %	0 %	0 %	33.33 %	Non-Coding
4	NC_001849	ATT	2	6	1013	1018	33.33 %	66.67 %	0 %	0 %	Non-Coding
5	NC_001849	AAT	2	6	1032	1037	66.67 %	33.33 %	0 %	0 %	Non-Coding
6	NC_001849	ATA	2	6	1086	1091	66.67 %	33.33 %	0 %	0 %	Non-Coding
7	NC_001849	CAA	2	6	1110	1115	66.67 %	0 %	0 %	33.33 %	Non-Coding
8	NC_001849	TAT	2	6	1196	1201	33.33 %	66.67 %	0 %	0 %	Non-Coding
9	NC_001849	CAA	2	6	1231	1236	66.67 %	0 %	0 %	33.33 %	Non-Coding
10	NC_001849	ACT	2	6	1243	1248	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
11	NC_001849	CTA	3	9	1297	1305	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
12	NC_001849	GTT	2	6	1838	1843	0 %	66.67 %	33.33 %	0 %	Non-Coding
13	NC_001849	TAT	2	6	1922	1927	33.33 %	66.67 %	0 %	0 %	Non-Coding
14	NC_001849	TAA	2	6	1943	1948	66.67 %	33.33 %	0 %	0 %	Non-Coding
15	NC_001849	TAT	2	6	2052	2057	33.33 %	66.67 %	0 %	0 %	Non-Coding
16	NC_001849	TTA	2	6	2085	2090	33.33 %	66.67 %	0 %	0 %	Non-Coding
17	NC_001849	ACT	2	6	2101	2106	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
18	NC_001849	TAT	2	6	2110	2115	33.33 %	66.67 %	0 %	0 %	Non-Coding
19	NC_001849	GAA	2	6	2121	2126	66.67 %	0 %	33.33 %	0 %	Non-Coding
20	NC_001849	ACT	3	9	2151	2159	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
21	NC_001849	TAA	2	6	2436	2441	66.67 %	33.33 %	0 %	0 %	Non-Coding
22	NC_001849	TAA	2	6	2452	2457	66.67 %	33.33 %	0 %	0 %	Non-Coding
23	NC_001849	GTT	2	6	2615	2620	0 %	66.67 %	33.33 %	0 %	Non-Coding
24	NC_001849	ATT	2	6	2674	2679	33.33 %	66.67 %	0 %	0 %	Non-Coding
25	NC_001849	ATA	2	6	2693	2698	66.67 %	33.33 %	0 %	0 %	Non-Coding
26	NC_001849	TAA	2	6	2718	2723	66.67 %	33.33 %	0 %	0 %	Non-Coding
27	NC_001849	TCC	2	6	2765	2770	0 %	33.33 %	0 %	66.67 %	Non-Coding
28	NC_001849	TAA	2	6	2788	2793	66.67 %	33.33 %	0 %	0 %	Non-Coding
29	NC_001849	ATC	2	6	2903	2908	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
30	NC_001849	CAA	2	6	3184	3189	66.67 %	0 %	0 %	33.33 %	Non-Coding
31	NC_001849	TAT	2	6	3231	3236	33.33 %	66.67 %	0 %	0 %	Non-Coding
32	NC_001849	TAA	2	6	3335	3340	66.67 %	33.33 %	0 %	0 %	Non-Coding
33	NC_001849	TAA	3	9	3383	3391	66.67 %	33.33 %	0 %	0 %	Non-Coding
34	NC_001849	AGA	2	6	3398	3403	66.67 %	0 %	33.33 %	0 %	Non-Coding
35	NC_001849	TAA	2	6	3436	3441	66.67 %	33.33 %	0 %	0 %	Non-Coding
36	NC_001849	ATT	2	6	3477	3482	33.33 %	66.67 %	0 %	0 %	Non-Coding
37	NC_001849	TTA	2	6	3489	3494	33.33 %	66.67 %	0 %	0 %	Non-Coding
38	NC_001849	ATA	2	6	3528	3533	66.67 %	33.33 %	0 %	0 %	Non-Coding
39	NC_001849	ATT	2	6	3608	3613	33.33 %	66.67 %	0 %	0 %	Non-Coding
40	NC_001849	ACA	2	6	3637	3642	66.67 %	0 %	0 %	33.33 %	Non-Coding
41	NC_001849	TAA	2	6	3858	3863	66.67 %	33.33 %	0 %	0 %	Non-Coding
42	NC_001849	TAA	3	9	3935	3943	66.67 %	33.33 %	0 %	0 %	Non-Coding
43	NC_001849	AAG	2	6	4024	4029	66.67 %	0 %	33.33 %	0 %	Non-Coding
44	NC_001849	TAA	2	6	4067	4072	66.67 %	33.33 %	0 %	0 %	Non-Coding
45	NC_001849	TAA	2	6	4082	4087	66.67 %	33.33 %	0 %	0 %	Non-Coding
46	NC_001849	TAA	2	6	4147	4152	66.67 %	33.33 %	0 %	0 %	Non-Coding
47	NC_001849	TAT	2	6	4182	4187	33.33 %	66.67 %	0 %	0 %	Non-Coding
48	NC_001849	TCA	2	6	4221	4226	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
49	NC_001849	TAA	2	6	4256	4261	66.67 %	33.33 %	0 %	0 %	Non-Coding
50	NC_001849	ATA	2	6	4325	4330	66.67 %	33.33 %	0 %	0 %	Non-Coding
51	NC_001849	ATT	2	6	4371	4376	33.33 %	66.67 %	0 %	0 %	Non-Coding
52	NC_001849	AAT	2	6	4382	4387	66.67 %	33.33 %	0 %	0 %	Non-Coding
53	NC_001849	AGA	2	6	4439	4444	66.67 %	0 %	33.33 %	0 %	Non-Coding
54	NC_001849	ATT	2	6	4451	4456	33.33 %	66.67 %	0 %	0 %	Non-Coding
55	NC_001849	AAT	2	6	4466	4471	66.67 %	33.33 %	0 %	0 %	Non-Coding
56	NC_001849	TGA	2	6	4547	4552	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
57	NC_001849	TAA	3	9	4584	4592	66.67 %	33.33 %	0 %	0 %	Non-Coding
58	NC_001849	TTA	2	6	4621	4626	33.33 %	66.67 %	0 %	0 %	Non-Coding
59	NC_001849	TAT	2	6	4660	4665	33.33 %	66.67 %	0 %	0 %	Non-Coding
60	NC_001849	ATT	2	6	4826	4831	33.33 %	66.67 %	0 %	0 %	Non-Coding
61	NC_001849	TAG	2	6	4887	4892	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
62	NC_001849	ATC	2	6	4896	4901	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
63	NC_001849	CAA	2	6	4949	4954	66.67 %	0 %	0 %	33.33 %	Non-Coding
64	NC_001849	ACT	2	6	4957	4962	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
65	NC_001849	ATT	2	6	5020	5025	33.33 %	66.67 %	0 %	0 %	Non-Coding
66	NC_001849	ATA	2	6	5041	5046	66.67 %	33.33 %	0 %	0 %	Non-Coding
67	NC_001849	TAA	2	6	5769	5774	66.67 %	33.33 %	0 %	0 %	Non-Coding
68	NC_001849	AAT	2	6	5832	5837	66.67 %	33.33 %	0 %	0 %	Non-Coding
69	NC_001849	ATT	2	6	5858	5863	33.33 %	66.67 %	0 %	0 %	Non-Coding
70	NC_001849	ATA	2	6	6517	6522	66.67 %	33.33 %	0 %	0 %	Non-Coding
71	NC_001849	TAT	3	9	6579	6587	33.33 %	66.67 %	0 %	0 %	Non-Coding
72	NC_001849	GTT	2	6	6593	6598	0 %	66.67 %	33.33 %	0 %	Non-Coding
73	NC_001849	ATT	2	6	6700	6705	33.33 %	66.67 %	0 %	0 %	Non-Coding
74	NC_001849	ATT	2	6	6838	6843	33.33 %	66.67 %	0 %	0 %	Non-Coding
75	NC_001849	GAA	2	6	6931	6936	66.67 %	0 %	33.33 %	0 %	Non-Coding
76	NC_001849	ATG	2	6	6958	6963	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
77	NC_001849	TAT	2	6	7083	7088	33.33 %	66.67 %	0 %	0 %	Non-Coding
78	NC_001849	AAC	2	6	7126	7131	66.67 %	0 %	0 %	33.33 %	Non-Coding
79	NC_001849	AAC	2	6	7269	7274	66.67 %	0 %	0 %	33.33 %	Non-Coding
80	NC_001849	GAA	2	6	7312	7317	66.67 %	0 %	33.33 %	0 %	Non-Coding
81	NC_001849	CAA	2	6	7353	7358	66.67 %	0 %	0 %	33.33 %	Non-Coding
82	NC_001849	TCT	2	6	7433	7438	0 %	66.67 %	0 %	33.33 %	Non-Coding
83	NC_001849	TTA	2	6	7549	7554	33.33 %	66.67 %	0 %	0 %	Non-Coding
84	NC_001849	ATT	2	6	7623	7628	33.33 %	66.67 %	0 %	0 %	Non-Coding
85	NC_001849	TAA	2	6	7682	7687	66.67 %	33.33 %	0 %	0 %	Non-Coding
86	NC_001849	ATT	2	6	8164	8169	33.33 %	66.67 %	0 %	0 %	Non-Coding
87	NC_001849	AAT	2	6	8207	8212	66.67 %	33.33 %	0 %	0 %	Non-Coding
88	NC_001849	CAA	2	6	8233	8238	66.67 %	0 %	0 %	33.33 %	Non-Coding
89	NC_001849	TAT	3	9	9403	9411	33.33 %	66.67 %	0 %	0 %	Non-Coding
90	NC_001849	GTA	2	6	9985	9990	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
91	NC_001849	ATA	2	6	10015	10020	66.67 %	33.33 %	0 %	0 %	Non-Coding
92	NC_001849	ATT	2	6	10160	10165	33.33 %	66.67 %	0 %	0 %	Non-Coding
93	NC_001849	AAT	2	6	10178	10183	66.67 %	33.33 %	0 %	0 %	Non-Coding
94	NC_001849	ATT	2	6	10191	10196	33.33 %	66.67 %	0 %	0 %	Non-Coding
95	NC_001849	TGG	2	6	10307	10312	0 %	33.33 %	66.67 %	0 %	Non-Coding
96	NC_001849	TGG	2	6	10317	10322	0 %	33.33 %	66.67 %	0 %	Non-Coding
97	NC_001849	ATT	2	6	10342	10347	33.33 %	66.67 %	0 %	0 %	Non-Coding
98	NC_001849	GTT	2	6	10359	10364	0 %	66.67 %	33.33 %	0 %	Non-Coding
99	NC_001849	GTA	2	6	10416	10421	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
100	NC_001849	TTA	2	6	10778	10783	33.33 %	66.67 %	0 %	0 %	Non-Coding
101	NC_001849	ATT	2	6	10938	10943	33.33 %	66.67 %	0 %	0 %	Non-Coding
102	NC_001849	TAA	4	12	10944	10955	66.67 %	33.33 %	0 %	0 %	Non-Coding
103	NC_001849	TGT	2	6	11765	11770	0 %	66.67 %	33.33 %	0 %	Non-Coding
104	NC_001849	TAA	2	6	11850	11855	66.67 %	33.33 %	0 %	0 %	Non-Coding
105	NC_001849	AAT	2	6	11858	11863	66.67 %	33.33 %	0 %	0 %	Non-Coding
106	NC_001849	GAA	2	6	11864	11869	66.67 %	0 %	33.33 %	0 %	Non-Coding
107	NC_001849	ATT	2	6	12011	12016	33.33 %	66.67 %	0 %	0 %	Non-Coding
108	NC_001849	TAT	2	6	12135	12140	33.33 %	66.67 %	0 %	0 %	Non-Coding
109	NC_001849	TTA	2	6	12296	12301	33.33 %	66.67 %	0 %	0 %	Non-Coding
110	NC_001849	TAA	3	9	12482	12490	66.67 %	33.33 %	0 %	0 %	Non-Coding
111	NC_001849	TTA	2	6	12678	12683	33.33 %	66.67 %	0 %	0 %	Non-Coding
112	NC_001849	TAA	2	6	12716	12721	66.67 %	33.33 %	0 %	0 %	Non-Coding
113	NC_001849	TCA	2	6	12807	12812	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
114	NC_001849	GTG	2	6	12861	12866	0 %	33.33 %	66.67 %	0 %	Non-Coding
115	NC_001849	TAA	2	6	12892	12897	66.67 %	33.33 %	0 %	0 %	Non-Coding
116	NC_001849	TAG	2	6	13067	13072	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
117	NC_001849	AAT	2	6	13318	13323	66.67 %	33.33 %	0 %	0 %	Non-Coding
118	NC_001849	TAA	2	6	14372	14377	66.67 %	33.33 %	0 %	0 %	Non-Coding
119	NC_001849	AGT	2	6	14506	14511	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
120	NC_001849	TGA	2	6	14577	14582	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
121	NC_001849	ATT	2	6	14597	14602	33.33 %	66.67 %	0 %	0 %	Non-Coding
122	NC_001849	AGA	2	6	14612	14617	66.67 %	0 %	33.33 %	0 %	Non-Coding
123	NC_001849	TAT	2	6	14690	14695	33.33 %	66.67 %	0 %	0 %	Non-Coding
124	NC_001849	TCA	2	6	14717	14722	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
125	NC_001849	ATT	2	6	14787	14792	33.33 %	66.67 %	0 %	0 %	Non-Coding
126	NC_001849	ATT	2	6	14825	14830	33.33 %	66.67 %	0 %	0 %	Non-Coding
127	NC_001849	ATA	2	6	14836	14841	66.67 %	33.33 %	0 %	0 %	Non-Coding
128	NC_001849	ATA	2	6	15090	15095	66.67 %	33.33 %	0 %	0 %	Non-Coding
129	NC_001849	TAA	3	9	15235	15243	66.67 %	33.33 %	0 %	0 %	Non-Coding
130	NC_001849	TTA	2	6	15246	15251	33.33 %	66.67 %	0 %	0 %	Non-Coding
131	NC_001849	TAG	3	9	15258	15266	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
132	NC_001849	ATA	2	6	15278	15283	66.67 %	33.33 %	0 %	0 %	Non-Coding
133	NC_001849	AGT	3	9	15297	15305	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
134	NC_001849	TAA	2	6	15342	15347	66.67 %	33.33 %	0 %	0 %	Non-Coding
135	NC_001849	GAA	2	6	15421	15426	66.67 %	0 %	33.33 %	0 %	Non-Coding
136	NC_001849	TTA	2	6	15544	15549	33.33 %	66.67 %	0 %	0 %	Non-Coding
137	NC_001849	ATA	2	6	16376	16381	66.67 %	33.33 %	0 %	0 %	Non-Coding
138	NC_001849	TAT	2	6	16386	16391	33.33 %	66.67 %	0 %	0 %	Non-Coding
139	NC_001849	ATA	2	6	16479	16484	66.67 %	33.33 %	0 %	0 %	Non-Coding
140	NC_001849	ATT	2	6	16501	16506	33.33 %	66.67 %	0 %	0 %	Non-Coding
141	NC_001849	GTT	2	6	16597	16602	0 %	66.67 %	33.33 %	0 %	Non-Coding
142	NC_001849	AAT	2	6	16723	16728	66.67 %	33.33 %	0 %	0 %	Non-Coding
143	NC_001849	GTA	2	6	16798	16803	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
144	NC_001849	TAT	2	6	16810	16815	33.33 %	66.67 %	0 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.