MICAS: Microsatellite Analysis Server 3.0

Hexa-nucleotide Non-Coding Repeats of Archaeoglobus veneficus SNP6 chromosome

Total Repeats: 75

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_015320	TCTGCG	2	12	9573	9584	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
2	NC_015320	AATTAC	2	12	14145	14156	50 %	33.33 %	0 %	16.67 %	Non-Coding
3	NC_015320	GCTCTT	2	12	25753	25764	0 %	50 %	16.67 %	33.33 %	Non-Coding
4	NC_015320	AAATAT	2	12	41917	41928	66.67 %	33.33 %	0 %	0 %	Non-Coding
5	NC_015320	CCAGCC	2	12	54682	54693	16.67 %	0 %	16.67 %	66.67 %	Non-Coding
6	NC_015320	CGGTTT	2	12	55124	55135	0 %	50 %	33.33 %	16.67 %	Non-Coding
7	NC_015320	AAAAGA	2	12	60071	60082	83.33 %	0 %	16.67 %	0 %	Non-Coding
8	NC_015320	ATAAAT	2	12	75790	75801	66.67 %	33.33 %	0 %	0 %	Non-Coding
9	NC_015320	AGGAGC	2	12	84123	84134	33.33 %	0 %	50 %	16.67 %	Non-Coding
10	NC_015320	AAAAAC	2	12	87986	87997	83.33 %	0 %	0 %	16.67 %	Non-Coding
11	NC_015320	GTTTTT	2	12	132446	132457	0 %	83.33 %	16.67 %	0 %	Non-Coding
12	NC_015320	TAAAAA	2	12	134563	134574	83.33 %	16.67 %	0 %	0 %	Non-Coding
13	NC_015320	GTGAAG	2	12	203421	203432	33.33 %	16.67 %	50 %	0 %	Non-Coding
14	NC_015320	AAACTA	2	12	271562	271573	66.67 %	16.67 %	0 %	16.67 %	Non-Coding
15	NC_015320	AAACTT	2	12	298213	298224	50 %	33.33 %	0 %	16.67 %	Non-Coding
16	NC_015320	AATCTC	2	12	304817	304828	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
17	NC_015320	AAAATT	2	12	327544	327555	66.67 %	33.33 %	0 %	0 %	Non-Coding
18	NC_015320	TAACGA	2	12	330605	330616	50 %	16.67 %	16.67 %	16.67 %	Non-Coding
19	NC_015320	ATTCTG	2	12	352915	352926	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
20	NC_015320	TTTAGC	2	12	371478	371489	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
21	NC_015320	TTTATT	2	12	385398	385409	16.67 %	83.33 %	0 %	0 %	Non-Coding
22	NC_015320	GTTTTA	2	12	414841	414852	16.67 %	66.67 %	16.67 %	0 %	Non-Coding
23	NC_015320	ATTTTT	2	12	422725	422736	16.67 %	83.33 %	0 %	0 %	Non-Coding
24	NC_015320	TATAAT	2	12	425600	425611	50 %	50 %	0 %	0 %	Non-Coding
25	NC_015320	TTAAAA	2	12	467449	467460	66.67 %	33.33 %	0 %	0 %	Non-Coding
26	NC_015320	GAGATA	2	12	498718	498729	50 %	16.67 %	33.33 %	0 %	Non-Coding
27	NC_015320	TAAAAT	2	12	546096	546107	66.67 %	33.33 %	0 %	0 %	Non-Coding
28	NC_015320	GGCGGA	2	12	551696	551707	16.67 %	0 %	66.67 %	16.67 %	Non-Coding
29	NC_015320	TACAAT	2	12	557745	557756	50 %	33.33 %	0 %	16.67 %	Non-Coding
30	NC_015320	ATAACT	2	12	568734	568745	50 %	33.33 %	0 %	16.67 %	Non-Coding
31	NC_015320	ATTTTT	2	12	586694	586705	16.67 %	83.33 %	0 %	0 %	Non-Coding
32	NC_015320	CCACGC	2	12	615349	615360	16.67 %	0 %	16.67 %	66.67 %	Non-Coding
33	NC_015320	TGAAAA	2	12	622155	622166	66.67 %	16.67 %	16.67 %	0 %	Non-Coding
34	NC_015320	ATCCTC	2	12	665193	665204	16.67 %	33.33 %	0 %	50 %	Non-Coding
35	NC_015320	AATTTA	2	12	666081	666092	50 %	50 %	0 %	0 %	Non-Coding
36	NC_015320	AGAGAA	2	12	720153	720164	66.67 %	0 %	33.33 %	0 %	Non-Coding
37	NC_015320	TCGTAG	2	12	773040	773051	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding
38	NC_015320	CCTCCG	2	12	831606	831617	0 %	16.67 %	16.67 %	66.67 %	Non-Coding
39	NC_015320	CCTCAA	2	12	863945	863956	33.33 %	16.67 %	0 %	50 %	Non-Coding
40	NC_015320	AGTTAA	2	12	892857	892868	50 %	33.33 %	16.67 %	0 %	Non-Coding
41	NC_015320	CAGCTC	2	12	927717	927728	16.67 %	16.67 %	16.67 %	50 %	Non-Coding
42	NC_015320	AAGAAT	2	12	991687	991698	66.67 %	16.67 %	16.67 %	0 %	Non-Coding
43	NC_015320	ATTTTC	2	12	997282	997293	16.67 %	66.67 %	0 %	16.67 %	Non-Coding
44	NC_015320	TTCCTC	2	12	1013344	1013355	0 %	50 %	0 %	50 %	Non-Coding
45	NC_015320	AAAATT	2	12	1016343	1016354	66.67 %	33.33 %	0 %	0 %	Non-Coding
46	NC_015320	TACAAC	2	12	1050348	1050359	50 %	16.67 %	0 %	33.33 %	Non-Coding
47	NC_015320	AAATTA	2	12	1055575	1055586	66.67 %	33.33 %	0 %	0 %	Non-Coding
48	NC_015320	CAAATG	2	12	1079868	1079879	50 %	16.67 %	16.67 %	16.67 %	Non-Coding
49	NC_015320	TGCAGG	2	12	1104166	1104177	16.67 %	16.67 %	50 %	16.67 %	Non-Coding
50	NC_015320	TAGTTA	2	12	1114864	1114875	33.33 %	50 %	16.67 %	0 %	Non-Coding
51	NC_015320	AAACTT	2	12	1141930	1141941	50 %	33.33 %	0 %	16.67 %	Non-Coding
52	NC_015320	TCAACG	2	12	1165366	1165377	33.33 %	16.67 %	16.67 %	33.33 %	Non-Coding
53	NC_015320	TTTCAA	2	12	1177650	1177661	33.33 %	50 %	0 %	16.67 %	Non-Coding
54	NC_015320	GAAACG	2	12	1179307	1179318	50 %	0 %	33.33 %	16.67 %	Non-Coding
55	NC_015320	GCTAAC	2	12	1195694	1195705	33.33 %	16.67 %	16.67 %	33.33 %	Non-Coding
56	NC_015320	TAAAAT	2	12	1295944	1295955	66.67 %	33.33 %	0 %	0 %	Non-Coding
57	NC_015320	TAAGTT	2	12	1349234	1349245	33.33 %	50 %	16.67 %	0 %	Non-Coding
58	NC_015320	TACAAA	2	12	1391578	1391589	66.67 %	16.67 %	0 %	16.67 %	Non-Coding
59	NC_015320	CAATGG	2	12	1397342	1397353	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
60	NC_015320	AGGTGA	2	12	1397487	1397498	33.33 %	16.67 %	50 %	0 %	Non-Coding
61	NC_015320	CTACAT	2	12	1398400	1398411	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
62	NC_015320	AAATAT	2	12	1421668	1421679	66.67 %	33.33 %	0 %	0 %	Non-Coding
63	NC_015320	AATACT	2	12	1565862	1565873	50 %	33.33 %	0 %	16.67 %	Non-Coding
64	NC_015320	ACATAT	2	12	1594102	1594113	50 %	33.33 %	0 %	16.67 %	Non-Coding
65	NC_015320	AAAAAT	2	12	1611553	1611564	83.33 %	16.67 %	0 %	0 %	Non-Coding
66	NC_015320	CAGGCT	2	12	1658742	1658753	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
67	NC_015320	CTCGCT	2	12	1668629	1668640	0 %	33.33 %	16.67 %	50 %	Non-Coding
68	NC_015320	TTTTGT	2	12	1669761	1669772	0 %	83.33 %	16.67 %	0 %	Non-Coding
69	NC_015320	CCAGCC	2	12	1682721	1682732	16.67 %	0 %	16.67 %	66.67 %	Non-Coding
70	NC_015320	AAAAAT	2	12	1715156	1715167	83.33 %	16.67 %	0 %	0 %	Non-Coding
71	NC_015320	TCAATT	2	12	1752379	1752390	33.33 %	50 %	0 %	16.67 %	Non-Coding
72	NC_015320	CTACTT	2	12	1753614	1753625	16.67 %	50 %	0 %	33.33 %	Non-Coding
73	NC_015320	GCGGAA	2	12	1798773	1798784	33.33 %	0 %	50 %	16.67 %	Non-Coding
74	NC_015320	TTTCAC	2	12	1823238	1823249	16.67 %	50 %	0 %	33.33 %	Non-Coding
75	NC_015320	TGAAAT	2	12	1896087	1896098	50 %	33.33 %	16.67 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.