MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Allochromatium vinosum DSM 180 plasmid pALVIN02

Total Repeats: 70

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_013862	GGT	2	6	1181	1186	0 %	33.33 %	66.67 %	0 %	Non-Coding
2	NC_013862	TGA	2	6	1206	1211	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
3	NC_013862	ACA	2	6	1294	1299	66.67 %	0 %	0 %	33.33 %	Non-Coding
4	NC_013862	GTC	2	6	9819	9824	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
5	NC_013862	GCG	2	6	9884	9889	0 %	0 %	66.67 %	33.33 %	Non-Coding
6	NC_013862	CGA	2	6	9907	9912	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
7	NC_013862	TCT	2	6	10042	10047	0 %	66.67 %	0 %	33.33 %	Non-Coding
8	NC_013862	AAC	2	6	10072	10077	66.67 %	0 %	0 %	33.33 %	Non-Coding
9	NC_013862	GAA	2	6	10153	10158	66.67 %	0 %	33.33 %	0 %	Non-Coding
10	NC_013862	TGA	2	6	10259	10264	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
11	NC_013862	AAG	2	6	10384	10389	66.67 %	0 %	33.33 %	0 %	Non-Coding
12	NC_013862	GAT	2	6	10438	10443	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
13	NC_013862	ATC	2	6	10454	10459	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
14	NC_013862	AGC	2	6	10496	10501	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
15	NC_013862	ACT	2	6	10504	10509	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
16	NC_013862	CCG	2	6	10977	10982	0 %	0 %	33.33 %	66.67 %	Non-Coding
17	NC_013862	ACA	2	6	11016	11021	66.67 %	0 %	0 %	33.33 %	Non-Coding
18	NC_013862	CGC	2	6	11041	11046	0 %	0 %	33.33 %	66.67 %	Non-Coding
19	NC_013862	GGC	2	6	11078	11083	0 %	0 %	66.67 %	33.33 %	Non-Coding
20	NC_013862	CGA	2	6	11086	11091	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
21	NC_013862	GAT	2	6	11682	11687	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
22	NC_013862	CAA	2	6	13638	13643	66.67 %	0 %	0 %	33.33 %	Non-Coding
23	NC_013862	GCA	2	6	13682	13687	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
24	NC_013862	CGT	2	6	13794	13799	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
25	NC_013862	CCT	2	6	13835	13840	0 %	33.33 %	0 %	66.67 %	Non-Coding
26	NC_013862	GTC	2	6	15151	15156	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
27	NC_013862	GTT	2	6	16335	16340	0 %	66.67 %	33.33 %	0 %	Non-Coding
28	NC_013862	CTA	2	6	16762	16767	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
29	NC_013862	GAT	2	6	16827	16832	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
30	NC_013862	TGT	2	6	16983	16988	0 %	66.67 %	33.33 %	0 %	Non-Coding
31	NC_013862	TCC	2	6	17074	17079	0 %	33.33 %	0 %	66.67 %	Non-Coding
32	NC_013862	GAC	2	6	17104	17109	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
33	NC_013862	GAG	2	6	17233	17238	33.33 %	0 %	66.67 %	0 %	Non-Coding
34	NC_013862	GGA	2	6	17748	17753	33.33 %	0 %	66.67 %	0 %	Non-Coding
35	NC_013862	GCG	2	6	21468	21473	0 %	0 %	66.67 %	33.33 %	Non-Coding
36	NC_013862	CGC	2	6	21481	21486	0 %	0 %	33.33 %	66.67 %	Non-Coding
37	NC_013862	CGT	3	9	21501	21509	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
38	NC_013862	TGT	2	6	25112	25117	0 %	66.67 %	33.33 %	0 %	Non-Coding
39	NC_013862	GAA	2	6	25183	25188	66.67 %	0 %	33.33 %	0 %	Non-Coding
40	NC_013862	AGT	2	6	25367	25372	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
41	NC_013862	AAT	2	6	25385	25390	66.67 %	33.33 %	0 %	0 %	Non-Coding
42	NC_013862	GAC	2	6	25554	25559	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
43	NC_013862	GAT	2	6	25560	25565	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
44	NC_013862	TAA	2	6	30784	30789	66.67 %	33.33 %	0 %	0 %	Non-Coding
45	NC_013862	CGC	2	6	30832	30837	0 %	0 %	33.33 %	66.67 %	Non-Coding
46	NC_013862	ATC	2	6	30847	30852	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
47	NC_013862	AGC	2	6	30982	30987	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
48	NC_013862	ATT	2	6	31264	31269	33.33 %	66.67 %	0 %	0 %	Non-Coding
49	NC_013862	TGG	2	6	31295	31300	0 %	33.33 %	66.67 %	0 %	Non-Coding
50	NC_013862	CAC	2	6	31314	31319	33.33 %	0 %	0 %	66.67 %	Non-Coding
51	NC_013862	CAA	2	6	31342	31347	66.67 %	0 %	0 %	33.33 %	Non-Coding
52	NC_013862	GTA	2	6	31353	31358	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
53	NC_013862	TTA	2	6	31968	31973	33.33 %	66.67 %	0 %	0 %	Non-Coding
54	NC_013862	CAA	2	6	31977	31982	66.67 %	0 %	0 %	33.33 %	Non-Coding
55	NC_013862	TCG	2	6	32129	32134	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
56	NC_013862	CCA	2	6	32154	32159	33.33 %	0 %	0 %	66.67 %	Non-Coding
57	NC_013862	GTT	2	6	32425	32430	0 %	66.67 %	33.33 %	0 %	Non-Coding
58	NC_013862	AAT	2	6	32435	32440	66.67 %	33.33 %	0 %	0 %	Non-Coding
59	NC_013862	CGA	2	6	32586	32591	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
60	NC_013862	CTG	2	6	34361	34366	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
61	NC_013862	ACA	2	6	35230	35235	66.67 %	0 %	0 %	33.33 %	Non-Coding
62	NC_013862	TAT	3	9	36427	36435	33.33 %	66.67 %	0 %	0 %	Non-Coding
63	NC_013862	ATT	2	6	36439	36444	33.33 %	66.67 %	0 %	0 %	Non-Coding
64	NC_013862	AGC	2	6	37623	37628	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
65	NC_013862	GGA	2	6	37737	37742	33.33 %	0 %	66.67 %	0 %	Non-Coding
66	NC_013862	CCA	2	6	37756	37761	33.33 %	0 %	0 %	66.67 %	Non-Coding
67	NC_013862	CAT	2	6	37978	37983	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
68	NC_013862	CCT	2	6	38420	38425	0 %	33.33 %	0 %	66.67 %	Non-Coding
69	NC_013862	TGG	2	6	38751	38756	0 %	33.33 %	66.67 %	0 %	Non-Coding
70	NC_013862	TAT	2	6	39010	39015	33.33 %	66.67 %	0 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.