MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 plasmid pAACI03

Total Repeats: 34

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_013208	CGC	2	6	168	173	0 %	0 %	33.33 %	66.67 %	Non-Coding
2	NC_013208	GGC	2	6	196	201	0 %	0 %	66.67 %	33.33 %	Non-Coding
3	NC_013208	CGC	2	6	207	212	0 %	0 %	33.33 %	66.67 %	Non-Coding
4	NC_013208	CGT	2	6	319	324	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
5	NC_013208	GGC	2	6	456	461	0 %	0 %	66.67 %	33.33 %	Non-Coding
6	NC_013208	ACC	2	6	3975	3980	33.33 %	0 %	0 %	66.67 %	Non-Coding
7	NC_013208	AGA	2	6	4075	4080	66.67 %	0 %	33.33 %	0 %	Non-Coding
8	NC_013208	ACC	2	6	4367	4372	33.33 %	0 %	0 %	66.67 %	Non-Coding
9	NC_013208	TTG	2	6	4438	4443	0 %	66.67 %	33.33 %	0 %	Non-Coding
10	NC_013208	TTC	2	6	4483	4488	0 %	66.67 %	0 %	33.33 %	Non-Coding
11	NC_013208	TCG	2	6	4490	4495	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
12	NC_013208	TTC	2	6	4600	4605	0 %	66.67 %	0 %	33.33 %	Non-Coding
13	NC_013208	CAG	2	6	4624	4629	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
14	NC_013208	TAC	2	6	4739	4744	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
15	NC_013208	AGG	2	6	4783	4788	33.33 %	0 %	66.67 %	0 %	Non-Coding
16	NC_013208	TCG	2	6	4815	4820	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
17	NC_013208	AGG	2	6	4821	4826	33.33 %	0 %	66.67 %	0 %	Non-Coding
18	NC_013208	CCG	2	6	4975	4980	0 %	0 %	33.33 %	66.67 %	Non-Coding
19	NC_013208	ACA	2	6	5009	5014	66.67 %	0 %	0 %	33.33 %	Non-Coding
20	NC_013208	CGG	3	9	5057	5065	0 %	0 %	66.67 %	33.33 %	Non-Coding
21	NC_013208	CCT	2	6	5935	5940	0 %	33.33 %	0 %	66.67 %	Non-Coding
22	NC_013208	CGC	2	6	6076	6081	0 %	0 %	33.33 %	66.67 %	Non-Coding
23	NC_013208	GAA	2	6	6093	6098	66.67 %	0 %	33.33 %	0 %	Non-Coding
24	NC_013208	GCC	2	6	6101	6106	0 %	0 %	33.33 %	66.67 %	Non-Coding
25	NC_013208	GAA	2	6	6205	6210	66.67 %	0 %	33.33 %	0 %	Non-Coding
26	NC_013208	CTT	2	6	6213	6218	0 %	66.67 %	0 %	33.33 %	Non-Coding
27	NC_013208	CTT	2	6	6234	6239	0 %	66.67 %	0 %	33.33 %	Non-Coding
28	NC_013208	CCA	2	6	6289	6294	33.33 %	0 %	0 %	66.67 %	Non-Coding
29	NC_013208	CAA	2	6	6323	6328	66.67 %	0 %	0 %	33.33 %	Non-Coding
30	NC_013208	AAT	2	6	6408	6413	66.67 %	33.33 %	0 %	0 %	Non-Coding
31	NC_013208	GGC	2	6	6697	6702	0 %	0 %	66.67 %	33.33 %	Non-Coding
32	NC_013208	ACG	2	6	7728	7733	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
33	NC_013208	CCT	2	6	7749	7754	0 %	33.33 %	0 %	66.67 %	Non-Coding
34	NC_013208	TCG	2	6	7828	7833	0 %	33.33 %	33.33 %	33.33 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.