MICAS: Microsatellite Analysis Server 3.0

Browse MICAS 3.0

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Selected: T

S.No	Sequence ID	Organism	Sequence Length	Organism Type	Total SSRs	Details
1	NC_016610	Tannerella forsythia ATCC 43037 chromosome	3,405,521 bp	Bacteria	68,781	Get Summary
2	NC_021033	Taylorella asinigenitalis 14/45 draft genome	1,540,266 bp	Bacteria	30,238	Get Summary
3	NC_016043	Taylorella asinigenitalis MCE3 chromosome	1,638,553 bp	Bacteria	32,340	Get Summary
4	NC_021036	Taylorella equigenitalis 14/56 draft genome	1,652,885 bp	Bacteria	32,437	Get Summary
5	NC_018108	Taylorella equigenitalis ATCC 35865 chromosome	1,732,123 bp	Bacteria	34,434	Get Summary
6	NC_014914	Taylorella equigenitalis MCE9 chromosome	1,695,860 bp	Bacteria	33,666	Get Summary
7	NC_019954	Tepidanaerobacter acetatoxydans Re1 complete genome	2,761,252 bp	Bacteria	61,487	Get Summary
8	NC_015519	Tepidanaerobacter sp. Re1 chromosome	2,759,867 bp	Bacteria	61,443	Get Summary
9	NC_012997	Teredinibacter turnerae T7901 chromosome	5,193,160 bp	Bacteria	99,923	Get Summary
10	NC_018014	Terriglobus roseus DSM 18391 chromosome	5,227,858 bp	Bacteria	114,371	Get Summary
11	NC_014963	Terriglobus saanensis SP1PR4 chromosome	5,095,226 bp	Bacteria	103,025	Get Summary
12	NC_016052	Tetragenococcus halophilus NBRC 12172	2,562,720 bp	Bacteria	61,384	Get Summary
13	NC_020888	Thalassolituus oleivorans MIL-1 complete genome	3,920,328 bp	Bacteria	75,666	Get Summary
14	NC_011662	Thauera sp. MZ1T chromosome	4,496,212 bp	Bacteria	126,517	Get Summary
15	NC_011667	Thauera sp. MZ1T plasmid pTha01	78,374 bp	Bacteria	1,740	Get Summary
16	NC_018870	Thermacetogenium phaeum DSM 12270 chromosome	2,939,057 bp	Bacteria	63,765	Get Summary
17	NC_014831	Thermaerobacter marianensis DSM 12885 chromosome	2,844,696 bp	Bacteria	83,812	Get Summary
18	NC_013522	Thermanaerovibrio acidaminovorans DSM 6589 chromosome	1,848,474 bp	Bacteria	43,188	Get Summary
19	NC_014152	Thermincola potens JR chromosome	3,157,416 bp	Bacteria	62,102	Get Summary
20	NC_014964	Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome	2,344,824 bp	Bacteria	56,560	Get Summary
21	NC_013921	Thermoanaerobacter italicus Ab9 chromosome	2,451,061 bp	Bacteria	59,504	Get Summary
22	NC_014209	Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome	2,306,092 bp	Bacteria	56,059	Get Summary
23	NC_010321	Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome	2,362,816 bp	Bacteria	57,007	Get Summary
24	NC_014538	Thermoanaerobacter sp. X513 chromosome	2,456,520 bp	Bacteria	59,160	Get Summary
25	NC_010320	Thermoanaerobacter sp. X514 chromosome	2,457,259 bp	Bacteria	59,233	Get Summary
26	NC_003869	Thermoanaerobacter tengcongensis MB4 chromosome	2,689,445 bp	Bacteria	61,255	Get Summary
27	NC_015958	Thermoanaerobacter wiegelii Rt8.B1 chromosome	2,785,056 bp	Bacteria	67,311	Get Summary
28	NC_018264	Thermoanaerobacterium phage THSA-485A	41,938 bp	Bacteria	978	Get Summary
29	NC_017992	Thermoanaerobacterium saccharolyticum JW/SL-YS485 chromosome	2,726,530 bp	Bacteria	63,525	Get Summary
30	NC_017998	Thermoanaerobacterium saccharolyticum JW/SL-YS485 plasmid pMU3262	110,881 bp	Bacteria	3,148	Get Summary
31	NC_014410	Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome	2,785,752 bp	Bacteria	67,185	Get Summary
32	NC_019970	Thermoanaerobacterium thermosaccharolyticum M0795	2,783,395 bp	Bacteria	67,822	Get Summary
33	NC_019956	Thermoanaerobacterium thermosaccharolyticum M0795 plasmid pTHETHE01	110,881 bp	Bacteria	3,156	Get Summary
34	NC_015555	Thermoanaerobacterium xylanolyticum LX-11 chromosome	2,534,358 bp	Bacteria	58,930	Get Summary
35	NC_019897	Thermobacillus composti KWC4 chromosome	4,206,343 bp	Bacteria	102,345	Get Summary
36	NC_019898	Thermobacillus composti KWC4 plasmid pTHECO01	149,182 bp	Bacteria	2,970	Get Summary
37	NC_013525	Thermobaculum terrenum ATCC BAA-798 chromosome 1	2,026,947 bp	Bacteria	38,547	Get Summary
38	NC_013526	Thermobaculum terrenum ATCC BAA-798 chromosome 2	1,074,634 bp	Bacteria	25,789	Get Summary
39	NC_007333	Thermobifida fusca YX chromosome	3,642,249 bp	Bacteria	92,294	Get Summary
40	NC_014165	Thermobispora bispora DSM 43833 chromosome	4,189,976 bp	Bacteria	121,153	Get Summary
41	NC_014804	Thermococcus barophilus MP chromosome	2,010,078 bp	Bacteria	40,132	Get Summary
42	NC_015471	Thermococcus barophilus MP plasmid pTBMP1	54,159 bp	Bacteria	1,129	Get Summary
43	NC_012804	Thermococcus gammatolerans EJ3 chromosome	2,045,438 bp	Bacteria	39,995	Get Summary
44	NC_006624	Thermococcus kodakarensis KOD1 chromosome	2,088,737 bp	Bacteria	41,071	Get Summary
45	NC_022084	Thermococcus litoralis DSM 5473	2,215,172 bp	Bacteria	43,830	Get Summary
46	NC_011529	Thermococcus onnurineus NA1 chromosome	1,847,607 bp	Bacteria	36,505	Get Summary
47	NC_012883	Thermococcus sibiricus MM 739	1,845,800 bp	Bacteria	38,217	Get Summary
48	NC_015865	Thermococcus sp. 4557 chromosome	2,011,320 bp	Bacteria	41,954	Get Summary
49	NC_016051	Thermococcus sp. AM4 chromosome	2,086,428 bp	Bacteria	41,295	Get Summary
50	NC_018015	Thermococcus sp. CL1 chromosome	1,950,313 bp	Bacteria	40,260	Get Summary
51	NC_013894	Thermocrinis albus DSM 14484 chromosome	1,500,577 bp	Bacteria	32,977	Get Summary
52	NC_015681	Thermodesulfatator indicus DSM 15286 chromosome	2,322,224 bp	Bacteria	48,871	Get Summary
53	NC_015682	Thermodesulfobacterium sp. OPB45 chromosome	1,634,377 bp	Bacteria	43,053	Get Summary
54	NC_015499	Thermodesulfobium narugense DSM 14796 chromosome	1,898,865 bp	Bacteria	45,476	Get Summary
55	NC_011296	Thermodesulfovibrio yellowstonii DSM 11347 chromosome	2,003,803 bp	Bacteria	49,437	Get Summary
56	NC_008698	Thermofilum pendens Hrk 5 chromosome	1,781,889 bp	Bacteria	37,539	Get Summary
57	NC_008696	Thermofilum pendens Hrk 5 plasmid pTPEN01	31,504 bp	Bacteria	693	Get Summary
58	NC_022093	Thermofilum sp. 1910b	1,750,259 bp	Bacteria	33,227	Get Summary
59	NC_017954	Thermogladius cellulolyticus 1633 chromosome	1,356,318 bp	Bacteria	28,890	Get Summary
60	NC_011959	Thermomicrobium roseum DSM 5159 chromosome	2,003,004 bp	Bacteria	45,102	Get Summary
61	NC_011961	Thermomicrobium roseum DSM 5159 plasmid unnamed	917,738 bp	Bacteria	21,729	Get Summary
62	NC_013510	Thermomonospora curvata DSM 43183 chromosome	5,639,016 bp	Bacteria	170,021	Get Summary
63	NC_002578	Thermoplasma acidophilum DSM 1728 chromosome	1,564,906 bp	Bacteria	29,169	Get Summary
64	NC_002689	Thermoplasma volcanium GSS1 chromosome	1,584,804 bp	Bacteria	31,685	Get Summary
65	NC_020892	Thermoplasmatales archaeon BRNA1	1,461,105 bp	Bacteria	32,512	Get Summary
66	NC_016070	Thermoproteus tenax Kra 1	1,841,542 bp	Bacteria	41,444	Get Summary
67	NC_015315	Thermoproteus uzoniensis 768-20 chromosome	1,936,063 bp	Bacteria	46,724	Get Summary
68	NC_014377	Thermosediminibacter oceani DSM 16646 chromosome	2,280,035 bp	Bacteria	46,557	Get Summary
69	NC_011653	Thermosipho africanus TCF52B chromosome	2,016,657 bp	Bacteria	53,059	Get Summary
70	NC_009616	Thermosipho melanesiensis BI429 chromosome	1,915,238 bp	Bacteria	49,495	Get Summary
71	NC_014160	Thermosphaera aggregans DSM 11486 chromosome	1,316,595 bp	Bacteria	24,968	Get Summary
72	NC_004113	Thermosynechococcus elongatus BP-1 chromosome	2,593,857 bp	Bacteria	48,110	Get Summary
73	NC_009828	Thermotoga lettingae TMO chromosome	2,135,342 bp	Bacteria	45,355	Get Summary
74	NC_021214	Thermotoga maritima MSB8	1,869,612 bp	Bacteria	41,208	Get Summary
75	NC_000853	Thermotoga maritima MSB8 chromosome	1,860,725 bp	Bacteria	41,002	Get Summary
76	NC_013642	Thermotoga naphthophila RKU-10	1,809,823 bp	Bacteria	39,895	Get Summary
77	NC_011978	Thermotoga neapolitana DSM 4359 chromosome	1,884,562 bp	Bacteria	41,200	Get Summary
78	NC_009486	Thermotoga petrophila RKU-1 chromosome	1,823,511 bp	Bacteria	40,184	Get Summary
79	NC_010483	Thermotoga sp. RQ2 chromosome	1,877,693 bp	Bacteria	41,425	Get Summary
80	NC_015707	Thermotoga thermarum DSM 5069 chromosome	2,039,943 bp	Bacteria	40,243	Get Summary
81	NC_014926	Thermovibrio ammonificans HB-1 chromosome	1,682,965 bp	Bacteria	32,906	Get Summary
82	NC_014917	Thermovibrio ammonificans HB-1 plasmid pTHEAM01	76,561 bp	Bacteria	1,664	Get Summary
83	NC_016148	Thermovirga lienii DSM 17291 chromosome	1,967,774 bp	Bacteria	38,427	Get Summary
84	NC_016149	Thermovirga lienii DSM 17291 plasmid pTLIE01	31,872 bp	Bacteria	624	Get Summary
85	NC_019386	Thermus oshimai JL-2	2,072,393 bp	Bacteria	55,624	Get Summary
86	NC_019387	Thermus oshimai JL-2 plasmid pTHEOS01	271,713 bp	Bacteria	7,005	Get Summary
87	NC_019388	Thermus oshimai JL-2 plasmid pTHEOS02	57,223 bp	Bacteria	1,456	Get Summary
88	NC_014974	Thermus scotoductus SA-01 chromosome	2,346,803 bp	Bacteria	53,811	Get Summary
89	NC_014975	Thermus scotoductus SA-01 plasmid pTSC8	8,383 bp	Bacteria	165	Get Summary
90	NC_017278	Thermus sp. CCB_US3_UF1 chromosome	2,243,772 bp	Bacteria	58,781	Get Summary
91	NC_016634	Thermus sp. CCB_US3_UF1 plasmid pTCCB09	19,716 bp	Bacteria	525	Get Summary
92	NC_005835	Thermus thermophilus HB27	1,894,877 bp	Bacteria	51,419	Get Summary
93	NC_005838	Thermus thermophilus HB27 plasmid pTT27	232,605 bp	Bacteria	6,024	Get Summary
94	NC_006461	Thermus thermophilus HB8 chromosome	1,849,742 bp	Bacteria	50,244	Get Summary
95	NC_006462	Thermus thermophilus HB8 plasmid pTT27	256,992 bp	Bacteria	6,672	Get Summary
96	NC_006463	Thermus thermophilus HB8 plasmid pTT8	9,322 bp	Bacteria	236	Get Summary
97	NC_017587	Thermus thermophilus JL-18 chromosome	1,902,595 bp	Bacteria	51,155	Get Summary
98	NC_017588	Thermus thermophilus JL-18 plasmid pTTJL1801	265,886 bp	Bacteria	6,822	Get Summary
99	NC_017590	Thermus thermophilus JL-18 plasmid pTTJL1802	142,731 bp	Bacteria	3,714	Get Summary
100	NC_017272	Thermus thermophilus SG0.5JP17-16 chromosome	1,863,201 bp	Bacteria	49,593	Get Summary
101	NC_017273	Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601	440,026 bp	Bacteria	11,058	Get Summary
102	NC_015581	Thioalkalimicrobium cyclicum ALM1 chromosome	1,932,455 bp	Bacteria	36,691	Get Summary
103	NC_019902	Thioalkalivibrio nitratireducens DSM 14787	4,002,352 bp	Bacteria	92,032	Get Summary
104	NC_013889	Thioalkalivibrio sp. K90mix chromosome	2,744,800 bp	Bacteria	63,319	Get Summary
105	NC_013930	Thioalkalivibrio sp. K90mix plasmid pTK9001	240,256 bp	Bacteria	4,903	Get Summary
106	NC_011901	Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome	3,464,554 bp	Bacteria	81,351	Get Summary
107	NC_007404	Thiobacillus denitrificans ATCC 25259 chromosome	2,909,809 bp	Bacteria	77,046	Get Summary
108	NC_018012	Thiocystis violascens DSM 198 chromosome	5,017,071 bp	Bacteria	111,817	Get Summary
109	NC_019940	Thioflavicoccus mobilis 8321 chromosome	4,048,921 bp	Bacteria	97,188	Get Summary
110	NC_019941	Thioflavicoccus mobilis 8321 plasmid pTHIMO01	88,600 bp	Bacteria	1,871	Get Summary
111	NC_007520	Thiomicrospira crunogena XCL-2 chromosome	2,427,734 bp	Bacteria	47,602	Get Summary
112	NC_014153	Thiomonas intermedia K12 chromosome	3,396,378 bp	Bacteria	82,209	Get Summary
113	NC_014154	Thiomonas intermedia K12 plasmid pTINT01	45,943 bp	Bacteria	1,006	Get Summary
114	NC_014155	thiomonas intermedia K12 plasmid pTINT02	19,774 bp	Bacteria	426	Get Summary
115	NC_014145	Thiomonas sp. 3As	3,738,778 bp	Bacteria	89,841	Get Summary
116	NC_014144	Thiomonas sp. str. 3As plasmid pTHI	46,756 bp	Bacteria	1,046	Get Summary
117	NC_017956	Tistrella mobilis KA081020-065 chromosome	3,919,492 bp	Bacteria	103,698	Get Summary
118	NC_017957	Tistrella mobilis KA081020-065 plasmid pTM1	692,456 bp	Bacteria	18,817	Get Summary
119	NC_017966	Tistrella mobilis KA081020-065 plasmid pTM2	690,188 bp	Bacteria	18,786	Get Summary
120	NC_017958	Tistrella mobilis KA081020-065 plasmid pTM3	1,126,962 bp	Bacteria	30,136	Get Summary
121	NC_017959	Tistrella mobilis KA081020-065 plasmid pTM4	83,885 bp	Bacteria	2,174	Get Summary
122	NC_012691	Tolumonas auensis DSM 9187 chromosome	3,471,292 bp	Bacteria	69,645	Get Summary
123	NC_015577	Treponema azotonutricium ZAS-9 chromosome	3,855,661 bp	Bacteria	73,426	Get Summary
124	NC_015500	Treponema brennaborense DSM 12168 chromosome	3,055,580 bp	Bacteria	70,964	Get Summary
125	NC_002967	Treponema denticola ATCC 35405 chromosome	2,843,201 bp	Bacteria	63,512	Get Summary
126	NC_021179	Treponema pallidum str. Fribourg-Blanc	1,140,481 bp	Bacteria	24,015	Get Summary
127	NC_016844	Treponema pallidum subsp. pallidum DAL-1 chromosome	1,139,970 bp	Bacteria	24,016	Get Summary
128	NC_010741	Treponema pallidum subsp. pallidum SS14	1,139,399 bp	Bacteria	23,974	Get Summary
129	NC_021508	Treponema pallidum subsp. pallidum SS14	1,139,569 bp	Bacteria	23,984	Get Summary
130	NC_017268	Treponema pallidum subsp. pallidum str. Chicago chromosome	1,139,281 bp	Bacteria	23,978	Get Summary
131	NC_018722	Treponema pallidum subsp. pallidum str. Mexico A chromosome	1,140,038 bp	Bacteria	24,024	Get Summary
132	NC_021490	Treponema pallidum subsp. pallidum str. Nichols	1,139,633 bp	Bacteria	23,994	Get Summary
133	NC_000919	Treponema pallidum subsp. pallidum str. Nichols chromosome	1,137,945 bp	Bacteria	23,959	Get Summary
134	NC_016848	Treponema pallidum subsp. pertenue str. CDC2 chromosome	1,139,738 bp	Bacteria	24,018	Get Summary
135	NC_016843	Treponema pallidum subsp. pertenue str. Gauthier chromosome	1,139,417 bp	Bacteria	23,987	Get Summary
136	NC_016842	Treponema pallidum subsp. pertenue str. SamoaD chromosome	1,139,329 bp	Bacteria	23,976	Get Summary
137	NC_015714	Treponema paraluiscuniculi Cuniculi A chromosome	1,133,390 bp	Bacteria	23,885	Get Summary
138	NC_022097	Treponema pedis str. T A4	2,889,324 bp	Bacteria	66,404	Get Summary
139	NC_015578	Treponema primitia ZAS-2 chromosome	4,059,867 bp	Bacteria	80,300	Get Summary
140	NC_015385	Treponema succinifaciens DSM 2489 chromosome	2,731,853 bp	Bacteria	60,864	Get Summary
141	NC_015386	Treponema succinifaciens DSM 2489 plasmid pTRESU01	165,572 bp	Bacteria	3,726	Get Summary
142	NC_008312	Trichodesmium erythraeum IMS101 chromosome	7,750,108 bp	Bacteria	183,436	Get Summary
143	NC_004572	Tropheryma whipplei str. Twist	927,303 bp	Bacteria	17,134	Get Summary
144	NC_004551	Tropheryma whipplei TW08/27	925,938 bp	Bacteria	17,064	Get Summary
145	NC_014221	Truepera radiovictrix DSM 17093 chromosome	3,260,398 bp	Bacteria	90,186	Get Summary
146	NC_014158	Tsukamurella paurometabola DSM 20162 chromosome	4,379,918 bp	Bacteria	114,837	Get Summary
147	NC_014159	Tsukamurella paurometabola DSM 20162 plasmid pTpau01	99,806 bp	Bacteria	2,666	Get Summary
148	NC_018020	Turneriella parva DSM 21527 chromosome	4,384,015 bp	Bacteria	87,555	Get Summary
149	NC_018021	Turneriella parva DSM 21527 plasmid pTURPA.01	25,287 bp	Bacteria	500	Get Summary

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