List of
Perfect Tri
-nucleotide repeats in Aspergillus oryzae RIB40
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001884663 | CCT | 5 | 3792 | 3806 | 15 | 0.00% | 33.33% | 0.00% | 66.67% | 169768202 |
| 2. | NW_001884663 | TGG | 6 | 35358 | 35375 | 18 | 0.00% | 33.33% | 66.67% | 0.00% | 317141414 |
| 3. | NW_001884663 | GGT | 4 | 87215 | 87226 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 317141440 |
| 4. | NW_001884663 | GGA | 5 | 118822 | 118836 | 15 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 5. | NW_001884663 | ACA | 4 | 196761 | 196772 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | 169768348 |
| 6. | NW_001884663 | GCG | 4 | 214933 | 214944 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 317143013 |
| 7. | NW_001884663 | CTT | 4 | 265764 | 265775 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 317141528 |
| 8. | NW_001884663 | AGA | 4 | 308995 | 309006 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 9. | NW_001884663 | GTC | 4 | 371343 | 371354 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 169768488 |
| 10. | NW_001884663 | AAT | 5 | 392843 | 392857 | 15 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 11. | NW_001884663 | AGA | 4 | 407819 | 407830 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 317141594 |
| 12. | NW_001884663 | AAC | 5 | 453328 | 453342 | 15 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 13. | NW_001884663 | ACA | 4 | 460485 | 460496 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | 169768554 |
| 14. | NW_001884663 | GCG | 4 | 462677 | 462688 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 317141621 |
| 15. | NW_001884663 | TGC | 6 | 488681 | 488698 | 18 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 16. | NW_001884663 | CTG | 4 | 504928 | 504939 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 169768580 |
| 17. | NW_001884663 | TCT | 4 | 539926 | 539937 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 18. | NW_001884663 | TCT | 4 | 539950 | 539961 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 19. | NW_001884663 | TCT | 4 | 539974 | 539985 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 20. | NW_001884663 | ACA | 5 | 581846 | 581860 | 15 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 21. | NW_001884663 | AGA | 4 | 589331 | 589342 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 22. | NW_001884663 | GCA | 6 | 593742 | 593759 | 18 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 23. | NW_001884663 | GGT | 4 | 596994 | 597005 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 24. | NW_001884663 | GCA | 5 | 597022 | 597036 | 15 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 25. | NW_001884663 | TGC | 11 | 597127 | 597159 | 33 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 26. | NW_001884663 | TGC | 4 | 676909 | 676920 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 317141721 |
| 27. | NW_001884663 | GGT | 4 | 722220 | 722231 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 317141749 |
| 28. | NW_001884663 | CTG | 5 | 762286 | 762300 | 15 | 0.00% | 33.33% | 33.33% | 33.33% | 317141812 |
| 29. | NW_001884663 | CAG | 7 | 762528 | 762548 | 21 | 33.33% | 0.00% | 33.33% | 33.33% | 317141812 |
| 30. | NW_001884663 | GCA | 4 | 771800 | 771811 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 317141870 |
| 31. | NW_001884663 | CAG | 4 | 776962 | 776973 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 169768744 |
| 32. | NW_001884663 | CCT | 4 | 802309 | 802320 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 317143058 |
| 33. | NW_001884663 | GAG | 4 | 810439 | 810450 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 317143062 |
| 34. | NW_001884663 | AGA | 4 | 815708 | 815719 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 317141925 |
| 35. | NW_001884663 | AGC | 5 | 818025 | 818039 | 15 | 33.33% | 0.00% | 33.33% | 33.33% | 317141927 |
| 36. | NW_001884663 | CGC | 4 | 822400 | 822411 | 12 | 0.00% | 0.00% | 33.33% | 66.67% | 169768774 |
| 37. | NW_001884663 | CGT | 4 | 843480 | 843491 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 317142063 |
| 38. | NW_001884663 | AGT | 14 | 865924 | 865965 | 42 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 39. | NW_001884663 | ATA | 5 | 882620 | 882634 | 15 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 40. | NW_001884663 | GGA | 9 | 892742 | 892768 | 27 | 33.33% | 0.00% | 66.67% | 0.00% | 169768832 |
| 41. | NW_001884663 | GTG | 4 | 913580 | 913591 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 42. | NW_001884663 | CAA | 4 | 918770 | 918781 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | 169768840 |
| 43. | NW_001884663 | AGA | 12 | 926313 | 926348 | 36 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 44. | NW_001884663 | ACG | 4 | 927795 | 927806 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 317142225 |
| 45. | NW_001884663 | GGT | 4 | 933916 | 933927 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 317142229 |
| 46. | NW_001884663 | AAT | 4 | 935252 | 935263 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 47. | NW_001884663 | CAC | 4 | 939192 | 939203 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | 169768858 |
| 48. | NW_001884663 | CGG | 4 | 941518 | 941529 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 317142232 |
| 49. | NW_001884663 | TCT | 4 | 946959 | 946970 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 169768864 |
| 50. | NW_001884663 | CTT | 6 | 955282 | 955299 | 18 | 0.00% | 66.67% | 0.00% | 33.33% | 317143069 |
| 51. | NW_001884663 | ACA | 4 | 1007812 | 1007823 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | 317142320 |
| 52. | NW_001884663 | TCC | 15 | 1036808 | 1036852 | 45 | 0.00% | 33.33% | 0.00% | 66.67% | 317142475 |
| 53. | NW_001884663 | TCC | 4 | 1036880 | 1036891 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 317142475 |
| 54. | NW_001884663 | GGA | 4 | 1052546 | 1052557 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 169768934 |
| 55. | NW_001884663 | GAG | 4 | 1052621 | 1052632 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 169768934 |
| 56. | NW_001884663 | GTG | 4 | 1059413 | 1059424 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 169768942 |
| 57. | NW_001884663 | CTT | 4 | 1073270 | 1073281 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 169768958 |
| 58. | NW_001884663 | ATA | 4 | 1092640 | 1092651 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 59. | NW_001884663 | AAT | 4 | 1101906 | 1101917 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 60. | NW_001884663 | TGC | 4 | 1163648 | 1163659 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 169769012 |
| 61. | NW_001884663 | CCG | 4 | 1164007 | 1164018 | 12 | 0.00% | 0.00% | 33.33% | 66.67% | 169769012 |
| 62. | NW_001884663 | TTC | 4 | 1181505 | 1181516 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 169769024 |
| 63. | NW_001884663 | TGA | 4 | 1218290 | 1218301 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 169769052 |
| 64. | NW_001884663 | TTC | 4 | 1231521 | 1231532 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 317142644 |
| 65. | NW_001884663 | TCT | 4 | 1232828 | 1232839 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 317142644 |
| 66. | NW_001884663 | GGA | 4 | 1238321 | 1238332 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 317142649 |
| 67. | NW_001884663 | TGC | 7 | 1241964 | 1241984 | 21 | 0.00% | 33.33% | 33.33% | 33.33% | 317142651 |
| 68. | NW_001884663 | ATT | 4 | 1267430 | 1267441 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 69. | NW_001884663 | CTT | 4 | 1271810 | 1271821 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 169769078 |
| 70. | NW_001884663 | TCT | 5 | 1273214 | 1273228 | 15 | 0.00% | 66.67% | 0.00% | 33.33% | 169769078 |
| 71. | NW_001884663 | CAT | 4 | 1279369 | 1279380 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 317142656 |
| 72. | NW_001884663 | GAG | 6 | 1332916 | 1332933 | 18 | 33.33% | 0.00% | 66.67% | 0.00% | 317142692 |
| 73. | NW_001884663 | TAG | 4 | 1332934 | 1332945 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 317142692 |
| 74. | NW_001884663 | GCC | 4 | 1335372 | 1335383 | 12 | 0.00% | 0.00% | 33.33% | 66.67% | 317142692 |
| 75. | NW_001884663 | ACA | 4 | 1370311 | 1370322 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | 317142707 |
| 76. | NW_001884663 | CTG | 6 | 1443399 | 1443416 | 18 | 0.00% | 33.33% | 33.33% | 33.33% | 317142741 |
| 77. | NW_001884663 | TCT | 5 | 1446411 | 1446425 | 15 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 78. | NW_001884663 | GAG | 5 | 1567984 | 1567998 | 15 | 33.33% | 0.00% | 66.67% | 0.00% | 317142811 |
| 79. | NW_001884663 | GAA | 12 | 1567999 | 1568034 | 36 | 66.67% | 0.00% | 33.33% | 0.00% | 317142811 |
| 80. | NW_001884663 | ATG | 4 | 1580666 | 1580677 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 317142817 |
| 81. | NW_001884663 | GAT | 4 | 1584224 | 1584235 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 82. | NW_001884663 | GAC | 4 | 1612309 | 1612320 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 169769294 |
| 83. | NW_001884663 | GAT | 6 | 1612321 | 1612338 | 18 | 33.33% | 33.33% | 33.33% | 0.00% | 169769294 |
| 84. | NW_001884663 | GAG | 13 | 1612339 | 1612377 | 39 | 33.33% | 0.00% | 66.67% | 0.00% | 169769294 |
| 85. | NW_001884663 | CTT | 5 | 1637561 | 1637575 | 15 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 86. | NW_001884663 | TGG | 4 | 1658707 | 1658718 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 169769328 |
| 87. | NW_001884663 | CTC | 5 | 1668254 | 1668268 | 15 | 0.00% | 33.33% | 0.00% | 66.67% | 317143098 |
| 88. | NW_001884663 | CTT | 29 | 1679336 | 1679422 | 87 | 0.00% | 66.67% | 0.00% | 33.33% | 169769334 |
| 89. | NW_001884663 | AGA | 4 | 1743159 | 1743170 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 90. | NW_001884663 | TGA | 4 | 1744748 | 1744759 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 169769382 |
| 91. | NW_001884663 | CAC | 4 | 1747096 | 1747107 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | 169769382 |
| 92. | NW_001884663 | TGC | 4 | 1752800 | 1752811 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 169769386 |
| 93. | NW_001884663 | AGA | 4 | 1757042 | 1757053 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 169769390 |
| 94. | NW_001884663 | AGA | 5 | 1757057 | 1757071 | 15 | 66.67% | 0.00% | 33.33% | 0.00% | 169769390 |
| 95. | NW_001884663 | GCT | 4 | 1764370 | 1764381 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 317142894 |
| 96. | NW_001884663 | CTG | 4 | 1771960 | 1771971 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 317142896 |
| 97. | NW_001884663 | CTC | 4 | 1780114 | 1780125 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 317142900 |
| 98. | NW_001884663 | TAT | 4 | 1794956 | 1794967 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 99. | NW_001884663 | TTA | 7 | 1827705 | 1827725 | 21 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 100. | NW_001884663 | AAG | 4 | 1840766 | 1840777 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 317142919 |
| 101. | NW_001884663 | CGA | 4 | 1850194 | 1850205 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 169769444 |
| 102. | NW_001884663 | TAG | 7 | 1870546 | 1870566 | 21 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 103. | NW_001884663 | TCT | 5 | 1872805 | 1872819 | 15 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 104. | NW_001884663 | GGT | 4 | 1878591 | 1878602 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 169769460 |
| 105. | NW_001884663 | TCA | 4 | 1929707 | 1929718 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 317142956 |
| 106. | NW_001884663 | AGA | 6 | 1930710 | 1930727 | 18 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 107. | NW_001884663 | TTC | 4 | 1967172 | 1967183 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 317142977 |
| 108. | NW_001884663 | CTA | 4 | 1994685 | 1994696 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 109. | NW_001884663 | TAT | 4 | 2005558 | 2005569 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |