ChloroMitoSSRDB 2.0 - Database of Microsatellites from Chloroplast & Mitochondrial Genomes

Mitochondria Motifs - Perfect TTC Repeats

S.No	Sequence ID	Motif	Iterations	Start	End	Tract Length	Sequence Name
1	NC_021373	TTC	11	6202	6234	33	Flammulina velutipes strain 4019-20 mitochondrion
2	NC_014050	TTC	7	979582	979602	21	Cucurbita pepo mitochondrion
3	NC_014050	TTC	6	861200	861217	18	Cucurbita pepo mitochondrion
4	NC_021971	TTC	5	3179	3193	15	Nautilocaris saintlaurentae mitochondrion
5	NC_001284	TTC	4	42771	42782	12	Arabidopsis thaliana mitochondrion
6	NC_001284	TTC	4	67675	67686	12	Arabidopsis thaliana mitochondrion
7	NC_001284	TTC	4	115018	115029	12	Arabidopsis thaliana mitochondrion
8	NC_002653	TTC	4	23402	23413	12	Candida albicans SC5314 mitochondrion
9	NC_004691	TTC	4	6641	6652	12	Candida glabrata mitochondrion
10	NC_005789	TTC	4	10108	10119	12	Ashbya gossypii ATCC 10895 mitochondrion
11	NC_007579	TTC	4	418989	419000	12	Triticum aestivum mitochondrion
12	NC_007935	TTC	4	32658	32669	12	Paracoccidioides brasiliensis mitochondrion
13	NC_007982	TTC	4	426971	426982	12	Zea mays subsp. mays mitochondrion
14	NC_008285	TTC	4	85093	85104	12	Brassica napus mitochondrion
15	NC_008285	TTC	4	210001	210012	12	Brassica napus mitochondrion
16	NC_008331	TTC	4	64487	64498	12	Zea perennis mitochondrion
17	NC_008331	TTC	4	83436	83447	12	Zea perennis mitochondrion
18	NC_008362	TTC	4	262021	262032	12	Tripsacum dactyloides mitochondrion
19	NC_008362	TTC	4	366167	366178	12	Tripsacum dactyloides mitochondrion
20	NC_008362	TTC	4	576554	576565	12	Tripsacum dactyloides mitochondrion
21	NC_010559	TTC	4	12045	12056	12	Nephtys sp. 'San Juan Island' YV-2008 mitochondrion
22	NC_011360	TTC	4	15186	15197	12	Blastocladiella emersonii mitochondrion
23	NC_012119	TTC	4	525894	525905	12	Vitis vinifera mitochondrion
24	NC_014043	TTC	4	375928	375939	12	Citrullus lanatus mitochondrion
25	NC_014050	TTC	4	207489	207500	12	Cucurbita pepo mitochondrion
26	NC_014050	TTC	4	325642	325653	12	Cucurbita pepo mitochondrion
27	NC_014050	TTC	4	387232	387243	12	Cucurbita pepo mitochondrion
28	NC_014050	TTC	4	599942	599953	12	Cucurbita pepo mitochondrion
29	NC_014050	TTC	4	681580	681591	12	Cucurbita pepo mitochondrion
30	NC_014050	TTC	4	695769	695780	12	Cucurbita pepo mitochondrion
31	NC_014050	TTC	4	711454	711465	12	Cucurbita pepo mitochondrion
32	NC_014050	TTC	4	739375	739386	12	Cucurbita pepo mitochondrion
33	NC_014050	TTC	4	778277	778288	12	Cucurbita pepo mitochondrion
34	NC_014050	TTC	4	860181	860192	12	Cucurbita pepo mitochondrion
35	NC_014050	TTC	4	869412	869423	12	Cucurbita pepo mitochondrion
36	NC_014050	TTC	4	938378	938389	12	Cucurbita pepo mitochondrion
37	NC_014805	TTC	4	16349	16360	12	Ogataea angusta mitochondrion
38	NC_014865	TTC	4	7586	7597	12	Paranemertes cf. peregrina SCS-2010 mitochondrion
39	NC_015073	TTC	4	572	583	12	Macrobrachium nipponense mitochondrion
40	NC_015141	TTC	4	446157	446168	12	Ricinus communis mitochondrion
41	NC_015360	TTC	4	8947	8958	12	Phoxinus percnurus mitochondrion
42	NC_015815	TTC	4	9008	9019	12	Siniperca scherzeri mitochondrion
43	NC_015822	TTC	4	8933	8944	12	Siniperca chuatsi mitochondrion
44	NC_015834	TTC	4	6034	6045	12	Apareiodon affinis mitochondrion
45	NC_015893	TTC	4	122488	122499	12	Chaetomium thermophilum var. thermophilum DSM 1495 mitochondrion
46	NC_015987	TTC	4	8932	8943	12	Siniperca knerii mitochondrion
47	NC_016004	TTC	4	18185	18196	12	Cucumis sativus mitochondrion chromosome 2
48	NC_016004	TTC	4	69583	69594	12	Cucumis sativus mitochondrion chromosome 2
49	NC_016005	TTC	4	3351	3362	12	Cucumis sativus mitochondrion chromosome 1
50	NC_016005	TTC	4	82765	82776	12	Cucumis sativus mitochondrion chromosome 1
51	NC_016005	TTC	4	175145	175156	12	Cucumis sativus mitochondrion chromosome 1
52	NC_016005	TTC	4	221438	221449	12	Cucumis sativus mitochondrion chromosome 1
53	NC_016005	TTC	4	247557	247568	12	Cucumis sativus mitochondrion chromosome 1
54	NC_016005	TTC	4	532535	532546	12	Cucumis sativus mitochondrion chromosome 1
55	NC_016005	TTC	4	791423	791434	12	Cucumis sativus mitochondrion chromosome 1
56	NC_016005	TTC	4	843196	843207	12	Cucumis sativus mitochondrion chromosome 1
57	NC_016005	TTC	4	926100	926111	12	Cucumis sativus mitochondrion chromosome 1
58	NC_016005	TTC	4	1354924	1354935	12	Cucumis sativus mitochondrion chromosome 1
59	NC_016006	TTC	4	3764	3775	12	Cucumis sativus mitochondrion chromosome 3
60	NC_016118	TTC	4	23962	23973	12	Brassica oleracea mitochondrion
61	NC_016118	TTC	4	147638	147649	12	Brassica oleracea mitochondrion
62	NC_016118	TTC	4	193994	194005	12	Brassica oleracea mitochondrion
63	NC_016118	TTC	4	317670	317681	12	Brassica oleracea mitochondrion
64	NC_016120	TTC	4	21048	21059	12	Brassica carinata mitochondrion
65	NC_016123	TTC	4	2225	2236	12	Brassica juncea mitochondrion
66	NC_016123	TTC	4	84867	84878	12	Brassica juncea mitochondrion
67	NC_016123	TTC	4	125905	125916	12	Brassica juncea mitochondrion
68	NC_016125	TTC	4	2223	2234	12	Brassica rapa subsp. campestris mitochondrion
69	NC_016125	TTC	4	84860	84871	12	Brassica rapa subsp. campestris mitochondrion
70	NC_016125	TTC	4	125894	125905	12	Brassica rapa subsp. campestris mitochondrion
71	NC_016209	TTC	4	46836	46847	12	Silene conica mitochondrion chromosome 31
72	NC_016216	TTC	4	52405	52416	12	Silene conica mitochondrion chromosome 28
73	NC_016229	TTC	4	33178	33189	12	Silene conica mitochondrion chromosome 57
74	NC_016233	TTC	4	76896	76907	12	Silene conica mitochondrion chromosome 18
75	NC_016235	TTC	4	64714	64725	12	Silene conica mitochondrion chromosome 7
76	NC_016238	TTC	4	20458	20469	12	Silene conica mitochondrion chromosome 56
77	NC_016244	TTC	4	94317	94328	12	Silene conica mitochondrion chromosome 39
78	NC_016249	TTC	4	120342	120353	12	Silene conica mitochondrion chromosome 1
79	NC_016261	TTC	4	42941	42952	12	Silene conica mitochondrion chromosome 41
80	NC_016262	TTC	4	86802	86813	12	Silene conica mitochondrion chromosome 35
81	NC_016291	TTC	4	6836	6847	12	Silene conica mitochondrion chromosome 71
82	NC_016303	TTC	4	7783	7794	12	Silene conica mitochondrion chromosome 33
83	NC_016304	TTC	4	44492	44503	12	Silene conica mitochondrion chromosome 76
84	NC_016329	TTC	4	19173	19184	12	Silene conica mitochondrion chromosome 47
85	NC_016330	TTC	4	42174	42185	12	Silene conica mitochondrion chromosome 116
86	NC_016343	TTC	4	27189	27200	12	Silene conica mitochondrion chromosome 75
87	NC_016343	TTC	4	68525	68536	12	Silene conica mitochondrion chromosome 75
88	NC_016349	TTC	4	90351	90362	12	Silene noctiflora mitochondrion chromosome 10
89	NC_016354	TTC	4	8677	8688	12	Silene noctiflora mitochondrion chromosome 30
90	NC_016354	TTC	4	53579	53590	12	Silene noctiflora mitochondrion chromosome 30
91	NC_016355	TTC	4	89906	89917	12	Silene noctiflora mitochondrion chromosome 6
92	NC_016365	TTC	4	70936	70947	12	Silene noctiflora mitochondrion chromosome 16
93	NC_016377	TTC	4	105133	105144	12	Silene noctiflora mitochondrion chromosome 11
94	NC_016381	TTC	4	21628	21639	12	Silene noctiflora mitochondrion chromosome 7
95	NC_016383	TTC	4	41773	41784	12	Silene noctiflora mitochondrion chromosome 26
96	NC_016390	TTC	4	17235	17246	12	Silene noctiflora mitochondrion chromosome 8
97	NC_016394	TTC	4	62976	62987	12	Silene noctiflora mitochondrion chromosome 59
98	NC_016398	TTC	4	122698	122709	12	Silene noctiflora mitochondrion chromosome 19
99	NC_016406	TTC	4	127849	127860	12	Silene vulgaris mitochondrion chromosome 1
100	NC_016693	TTC	4	14721	14732	12	Trypauchen vagina mitochondrion
101	NC_016697	TTC	4	10248	10259	12	Pleurobrachia bachei mitochondrion
102	NC_016702	TTC	4	6045	6056	12	Clupeichthys aesarnensis mitochondrion
103	NC_016740	TTC	4	183805	183816	12	Phoenix dactylifera mitochondrion
104	NC_016741	TTC	4	33156	33167	12	Boea hygrometrica mitochondrion
105	NC_016741	TTC	4	170686	170697	12	Boea hygrometrica mitochondrion
106	NC_016742	TTC	4	51895	51906	12	Millettia pinnata mitochondrion
107	NC_016742	TTC	4	328336	328347	12	Millettia pinnata mitochondrion
108	NC_016743	TTC	4	236930	236941	12	Lotus japonicus mitochondrion
109	NC_016756	TTC	4	10090	10101	12	Ashbya gossypii FDAG1 mitochondrion
110	NC_016872	TTC	4	5892	5903	12	Plecotus rafinesquii mitochondrion
111	NC_016952	TTC	4	14524	14535	12	Emplectonema gracile mitochondrion
112	NC_017010	TTC	4	1305	1316	12	Alatina moseri mitochondrion chromosome 4
113	NC_017755	TTC	4	4321	4332	12	Huperzia squarrosa mitochondrion
114	NC_017840	TTC	4	117855	117866	12	Spirodela polyrhiza mitochondrion
115	NC_017886	TTC	4	2427	2438	12	Concholepas concholepas mitochondrion
116	NC_017888	TTC	4	4465	4476	12	Scartelaos histophorus mitochondrion
117	NC_018041	TTC	4	204018	204029	12	Mimulus guttatus mitochondrion
118	NC_018046	TTC	4	17033	17044	12	Candida albicans strain L757 mitochondrion
119	NC_018097	TTC	4	572	583	12	Stenopus hispidus mitochondrion
120	NC_018551	TTC	4	82956	82967	12	Raphanus sativus mitochondrion
121	NC_019998	TTC	4	9754	9765	12	Heleophryne regis mitochondrion
122	NC_020043	TTC	4	30036	30047	12	Dipodascus magnusii mitochondrion
123	NC_020430	TTC	4	28235	28246	12	Ceratocystis cacaofunesta mitochondrion
124	NC_020455	TTC	4	59369	59380	12	Glycine max mitochondrion
125	NC_021136	TTC	4	9759	9770	12	Siniperca obscura isolate BG mitochondrion
126	NC_021612	TTC	4	14775	14786	12	Epinephelus trimaculatus mitochondrion
127	NC_021768	TTC	4	6036	6047	12	Glyphis glyphis mitochondrion
128	NC_000890	TTC	4	5026	5037	12	Mustelus manazo mitochondrion
129	NC_001626	TTC	4	7187	7198	12	Petromyzon marinus mitochondrion
130	NC_002012	TTC	4	6045	6056	12	Squalus acanthias mitochondrion
131	NC_003159	TTC	4	10625	10636	12	Chauliodus sloani mitochondrion
132	NC_004410	TTC	4	8940	8951	12	Pholis crassispina mitochondrion
133	NC_004595	TTC	4	8935	8946	12	Glossanodon semifasciatus mitochondrion
134	NC_005129	TTC	4	5906	5917	12	Elephas maximus mitochondrion
135	NC_007598	TTC	4	16193	16204	12	Nisaetus nipalensis mitochondrion
136	NC_007599	TTC	4	16504	16515	12	Nisaetus alboniger mitochondrion
137	NC_008662	TTC	4	8956	8967	12	Gobio gobio mitochondrion
138	NC_008755	TTC	4	2005	2016	12	Trichophthalma punctata mitochondrion
139	NC_009059	TTC	4	9975	9986	12	Cymatogaster aggregata mitochondrion
140	NC_009589	TTC	4	6047	6058	12	Spratelloides gracilis mitochondrion
141	NC_009590	TTC	4	6062	6073	12	Odaxothrissa vittata mitochondrion
142	NC_009592	TTC	4	6061	6072	12	Sardina pilchardus mitochondrion
143	NC_009984	TTC	4	575	586	12	Nothopuga sp. 1 LP-2008 mitochondrion
144	NC_010232	TTC	4	14051	14062	12	Hyla japonica mitochondrion
145	NC_010268	TTC	4	14869	14880	12	Aulorhynchus flavidus mitochondrion
146	NC_011170	TTC	4	14757	14768	12	Paratilapia polleni mitochondrion
147	NC_011171	TTC	4	8974	8985	12	Tylochromis polylepis mitochondrion
148	NC_011818	TTC	4	16790	16801	12	Accipiter gentilis mitochondrion
149	NC_011921	TTC	4	6042	6053	12	Nelusetta ayraudi mitochondrion
150	NC_011951	TTC	4	8914	8925	12	Chaetodermis penicilligerus mitochondrion
151	NC_012050	TTC	4	6029	6040	12	Gyrinomimus myersi mitochondrion
152	NC_012217	TTC	4	572	583	12	Macrobrachium lanchesteri mitochondrion
153	NC_012574	TTC	4	1982	1993	12	Tachypleus tridentatus mitochondrion
154	NC_013070	TTC	4	9851	9862	12	Psacothea hilaris mitochondrion
155	NC_013144	TTC	4	8931	8942	12	Psenes cyanophrys mitochondrion
156	NC_013480	TTC	4	572	583	12	Xenograpsus testudinatus mitochondrion
157	NC_013828	TTC	4	10095	10106	12	Clinocottus analis mitochondrion
158	NC_013877	TTC	4	4797	4808	12	Balanoglossus clavigerus mitochondrion

ChloroMitoSSRDB 2.0 Webserver cum Database of Cholorplast and Mitochondrial Microsatellites

Mitochondria Motifs - Perfect TTC Repeats