ChloroMitoSSRDB 2.0 Webserver cum Database of Cholorplast and Mitochondrial Microsatellites

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Chloroplast Motifs - Imperfect TG Repeats

S.NoSequence IDMotifIterationsStartEndTract LengthSequence Name
1NC_009766TG7576305764314 Cuscuta reflexa chloroplast
2NC_011031TG7811278113913 Oedogonium cardiacum chloroplast
3NC_011031TG711561511562814 Oedogonium cardiacum chloroplast
4NC_014569TG6942499425911Erodium texanum plastid
5NC_014570TG6440734408311Eucalyptus grandis chloroplast
6NC_014674TG6455434555311Castanea mollissima chloroplast
7NC_014676TG6429484295811Theobroma cacao chloroplast
8NC_014697TG6419884199811Prunus persica chloroplast
9NC_014699TG610532310533311Equisetum arvense chloroplast
10NC_014807TG6439974400711Corynocarpus laevigata chloroplast
11NC_015083TG6406704068011Erodium carvifolium chloroplast
12NC_015113TG6415114152111Anthriscus cerefolium chloroplast
13NC_015139TG6398233983311Brassica rapa subsp. pekinensis chloroplast
14NC_015204TG6326493266012Gossypium thurberi chloroplast
15NC_015204TG6428164282611Gossypium thurberi chloroplast
16NC_015308TG6441514416111Hevea brasiliensis chloroplast
17NC_015605TG6448454485511Nelumbo lutea chloroplast
18NC_015605TG612113212114312Nelumbo lutea chloroplast
19NC_015610TG6448114482111Nelumbo nucifera chloroplast
20NC_015610TG612123412124512Nelumbo nucifera chloroplast
21NC_015803TG6426774268711Indocalamus longiauritus plastid
22NC_015817TG6426124262211Phyllostachys edulis chloroplast
23NC_015820TG6427004271011Acidosasa purpurea chloroplast
24NC_015826TG6425934260311Phyllostachys nigra var. henonis chloroplast
25NC_015830TG6422724228211Bambusa emeiensis chloroplast
26NC_015831TG6423624237211Ferrocalamus rimosivaginus plastid
27NC_015892TG6431444315411Magnolia kwangsiensis chloroplast
28NC_015983TG6428324284211Cucumis melo subsp. melo chloroplast
29NC_015990TG6417854179511Panicum virgatum chloroplast
30NC_015996TG6434994350911Pyrus pyrifolia chloroplast
31NC_016068TG6423314234111Nicotiana undulata chloroplast
32NC_016430TG6429294293911Eleutherococcus senticosus chloroplast
33NC_016433TG6411574116711Sesamum indicum chloroplast
34NC_016468TG6411674117711Boea hygrometrica chloroplast
35NC_016668TG6325543256512Gossypium raimondii chloroplast
36NC_016668TG6426824269211Gossypium raimondii chloroplast
37NC_016670TG6326853269612Gossypium darwinii chloroplast
38NC_016670TG6429264293611Gossypium darwinii chloroplast
39NC_016677TG6413714138111Leersia tisserantii plastid
40NC_016690TG6326483265912Gossypium tomentosum chloroplast
41NC_016690TG6429084291811Gossypium tomentosum chloroplast
42NC_016692TG6326373264812Gossypium herbaceum subsp. africanum chloroplast
43NC_016692TG6428054281511Gossypium herbaceum subsp. africanum chloroplast
44NC_016699TG6426244263411Phyllostachys propinqua chloroplast
45NC_016711TG6326443265512Gossypium mustelinum chloroplast
46NC_016711TG6428584286811Gossypium mustelinum chloroplast
47NC_016712TG6326123262312Gossypium arboreum chloroplast
48NC_016712TG6427784278811Gossypium arboreum chloroplast
49NC_016718TG6412534126311Rhynchoryza subulata plastid
50NC_016734TG6397703978011Brassica napus chloroplast
51NC_016736TG6449964500611Ricinus communis chloroplast
52NC_016921TG6420404205011Pentactina rupicola chloroplast
53NC_016927TG6400804009011Oryza meridionalis chloroplast
54NC_016986TG6451004511011Ginkgo biloba chloroplast
55NC_017609TG6422004221011Phalaenopsis equestris chloroplast
56NC_017835TG6400734008311Oryza rufipogon chloroplast
57NC_017894TG6325703258112Gossypium gossypioides chloroplast
58NC_017894TG6427014271111Gossypium gossypioides chloroplast
59NC_018109TG6323343234512Gossypium incanum chloroplast
60NC_018109TG6423404235011Gossypium incanum chloroplast
61NC_018110TG6324413245212Gossypium somalense chloroplast
62NC_018110TG6424584246811Gossypium somalense chloroplast
63NC_018111TG6322553226612Gossypium capitis-viridis chloroplast
64NC_018111TG6423034231311Gossypium capitis-viridis chloroplast
65NC_018112TG6324413245212Gossypium areysianum chloroplast
66NC_018112TG6424824249211Gossypium areysianum chloroplast
67NC_018113TG6425354254511Gossypium robinsonii chloroplast
68NC_018114TG6415924160211Erycina pusilla chloroplast
69NC_018117TG6421394214911Datura stramonium chloroplast
70NC_018357TG6432234323311Magnolia denudata chloroplast
71NC_018552TG6420864209611Capsicum annuum chloroplast
72NC_018565TG6405164052611Pachycladon enysii chloroplast
73NC_019616TG6566705668011Vaccinium macrocarpon plastid
74NC_019648TG6398323984211Festuca altissima plastid
75NC_019649TG6387463875611Festuca ovina plastid
76NC_019650TG6397743978411Festuca pratensis plastid
77NC_019651TG6397023971211Lolium multiflorum plastid
78NC_020019TG6424994250911Camellia sinensis chloroplast
79NC_020092TG6755217553111Chrysanthemum x morifolium chloroplast
80NC_020098TG6415094151911Tectona grandis chloroplast
81NC_020146TG6678076781812Equisetum hyemale chloroplast
82NC_020152TG6455414555111Quercus rubra plastid
83NC_020316TG6433414335111Magnolia officinalis chloroplast
84NC_020317TG6433384334811Magnolia officinalis subsp. biloba voucher SC001 chloroplast
85NC_020318TG6429564296611Magnolia grandiflora voucher NJ016 chloroplast
86NC_020320TG6754787548811Chrysanthemum indicum voucher HeN001 chloroplast
87NC_020341TG6426144262411Arundinaria gigantea chloroplast
88NC_020362TG6447544476411Heliconia collinsiana plastid
89NC_020367TG6425174252711Dasypogon bromeliifolius plastid
90NC_020431TG6399183992811Salvia miltiorrhiza chloroplast
91NC_020607TG6754777548711Artemisia frigida chloroplast
92NC_021101TG6412524126211Francoa sonchifolia plastid
93NC_021102TG6400824009211Pachycladon cheesemanii chloroplast
94NC_021109TG616011016012011Pleodorina starrii plastid
95NC_021372TG6424094241911Pharus latifolius chloroplast
96NC_021423TG6309633097412Catharanthus roseus cultivar Pacifica Punch Halo chloroplast
97NC_021423TG6417074171711Catharanthus roseus cultivar Pacifica Punch Halo chloroplast
98NC_021426TG6443734438311Trochodendron aralioides chloroplast
99NC_021429TG6415214153111Cymbidium aloifolium voucher KUN:YJB100604 chloroplast
100NC_021430TG6415634157311Cymbidium sinense voucher KUN:YJB100605 chloroplast
101NC_021431TG6416614167111Cymbidium tortisepalum voucher KUN:HJL091027 chloroplast
102NC_021432TG6410784108811Cymbidium tracyanum voucher KUN:YJB100606 chloroplast
103NC_021433TG6414094141911Cymbidium mannii voucher KUN:YJB100602 chloroplast
104NC_021760TG6402454025511Triticum monococcum chloroplast
105NC_021761TG6403114032111Secale cereale chloroplast
106NC_021762TG6402234023311Triticum urartu chloroplast
107NC_022099TG610404610405611Medicago truncatula cultivar Jemalong 2HA plastid
108NC_022100TG610385310386311Medicago truncatula cultivar Borung plastid
109NC_022133TG6401394014911Aegilops tauschii chloroplast
110NC_022135TG6402884029811Aegilops speltoides isolate SPE0661 chloroplast
111NC_022136TG6233052331511Lygodium japonicum chloroplast
112NC_000927TG6780647807512 Nephroselmis olivacea chloroplast
113NC_000927TG610926810927912 Nephroselmis olivacea chloroplast
114NC_000927TG611252811253811 Nephroselmis olivacea chloroplast
115NC_000932TG6406844069411 Arabidopsis thaliana chloroplast
116NC_001319TG6661926620312 Marchantia polymorpha chloroplast
117NC_001320TG6400774008711 Oryza sativa Japonica Group plastid
118NC_001666TG6424314244111 Zea mays chloroplast
119NC_001675TG6239702398011 Cyanophora paradoxa cyanelle
120NC_001879TG6423184232811 Nicotiana tabacum plastid
121NC_002762TG6405434055311 Triticum aestivum chloroplast
122NC_003119TG610404610405611 Medicago truncatula chloroplast
123NC_003386TG612417512418612 Psilotum nudum chloroplast
124NC_004561TG6420614207111 Atropa belladonna chloroplast
125NC_004766TG6661036611311 Adiantum capillus-veneris chloroplast
126NC_004766TG610043410044512 Adiantum capillus-veneris chloroplast
127NC_004799TG6220022201211 Cyanidioschyzon merolae strain 10D chloroplast
128NC_005353TG6595395955012 Chlamydomonas reinhardtii chloroplast
129NC_005353TG6705917060111 Chlamydomonas reinhardtii chloroplast
130NC_005878TG610460910461911 Saccharum hybrid cultivar SP-80-3280 chloroplast
131NC_005973TG6400114002111 Oryza nivara chloroplast
132NC_006084TG6429824299211 Saccharum hybrid cultivar NCo 310 chloroplast
133NC_006290TG6426314264111 Panax ginseng chloroplast
134NC_007144TG6428144282411 Cucumis sativus chloroplast
135NC_007288TG69986999611 Emiliania huxleyi chloroplast
136NC_007499TG6420534206311 Phalaenopsis aphrodite subsp. formosana chloroplast
137NC_007500TG6423154232511 Nicotiana sylvestris chloroplast
138NC_007602TG6422444225411 Nicotiana tomentosiformis chloroplast
139NC_007898TG6414014141111 Solanum lycopersicum chloroplast
140NC_007932TG6538675387711 Porphyra yezoensis chloroplast
141NC_007943TG6414234143311 Solanum bulbocastanum chloroplast
142NC_007944TG6327113272212 Gossypium hirsutum chloroplast
143NC_007944TG6428414285111 Gossypium hirsutum chloroplast
144NC_007957TG6443114432111 Vitis vinifera chloroplast
145NC_008096TG6415424155211 Solanum tuberosum chloroplast
146NC_008115TG6441924420211 Eucalyptus globulus subsp. globulus chloroplast
147NC_008117TG6562605627011 Zygnema circumcarinatum chloroplast
148NC_008155TG6400374004711 Oryza sativa Indica Group chloroplast
149NC_008235TG6405934060311 Populus alba chloroplast
150NC_008289TG6582795828911 Ostreococcus tauri chloroplast
151NC_008289TG6585685857811 Ostreococcus tauri chloroplast
152NC_008325TG6409224093211 Daucus carota chloroplast
153NC_008326TG6433254333511 Liriodendron tulipifera chloroplast
154NC_008334TG6439464395611 Citrus sinensis chloroplast
155NC_008336TG6415954160511 Nandina domestica chloroplast
156NC_008359TG6426114262111 Morus indica chloroplast
157NC_008454TG617524217525211 Pelargonium x hortorum chloroplast
158NC_008457TG6423244233411 Piper cenocladum chloroplast
159NC_008535TG6412274123711 Coffea arabica chloroplast
160NC_008590TG6407074071711 Hordeum vulgare subsp. vulgare chloroplast
161NC_008591TG6403924040211 Agrostis stolonifera chloroplast
162NC_008602TG6432014321111 Sorghum bicolor chloroplast
163NC_008641TG6326613267212 Gossypium barbadense chloroplast
164NC_008641TG6428924290211 Gossypium barbadense chloroplast
165NC_008829TG612544012545011 Angiopteris evecta chloroplast
166NC_009143TG6409074091711 Populus trichocarpa chloroplast
167NC_009265TG6402684027811 Aethionema cordifolium chloroplast
168NC_009266TG6403334034311 Aethionema grandiflorum chloroplast
169NC_009267TG6403204033011 Olimarabidopsis pumila chloroplast
170NC_009268TG6399053991511 Arabis hirsuta chloroplast
171NC_009269TG6405714058111 Barbarea verna chloroplast
172NC_009270TG6401294013911 Capsella bursa-pastoris chloroplast
173NC_009271TG6402994030911 Crucihimalaya wallichii chloroplast
174NC_009272TG6396753968511 Draba nemorosa chloroplast
175NC_009273TG6403094031911 Lepidium virginicum chloroplast
176NC_009274TG6392323924211 Lobularia maritima chloroplast
177NC_009275TG6403374034711 Nasturtium officinale chloroplast
178NC_009618TG6422554226511 Cycas taitungensis chloroplast
179NC_009766TG6351913520111 Cuscuta reflexa chloroplast
180NC_009808TG6422544226411 Ipomoea purpurea chloroplast
181NC_009950TG6398223983211 Lolium perenne chloroplast
182NC_009963TG6366423665211 Cuscuta exaltata chloroplast
183NC_010109TG6358273583812 Lemna minor chloroplast
184NC_010323TG6430594306911 Carica papaya chloroplast
185NC_010359TG6287692878012 Aneura mirabilis chloroplast
186NC_010433TG6433814339111 Manihot esculenta chloroplast
187NC_010548TG610562910564012 Cryptomeria japonica chloroplast
188NC_011031TG6263352634511 Oedogonium cardiacum chloroplast
189NC_011031TG6450744508411 Oedogonium cardiacum chloroplast
190NC_011031TG6644606447112 Oedogonium cardiacum chloroplast
191NC_011031TG6808398085012 Oedogonium cardiacum chloroplast
192NC_011031TG6810198103012 Oedogonium cardiacum chloroplast
193NC_011031TG610480710481812 Oedogonium cardiacum chloroplast
194NC_011031TG611452911453911 Oedogonium cardiacum chloroplast
195NC_011031TG616539216540211 Oedogonium cardiacum chloroplast
196NC_011031TG616764616765611 Oedogonium cardiacum chloroplast
197NC_011031TG618633818634811 Oedogonium cardiacum chloroplast
198NC_011032TG6398703988011 Brachypodium distachyon chloroplast
199NC_011713TG6401924020211 Festuca arundinacea chloroplast
200NC_011828TG6548645487411 Trifolium subterraneum chloroplast
201NC_011954TG6126541266411 Ephedra equisetina chloroplast
202NC_012224TG6456234563311 Jatropha curcas chloroplast
203NC_012568TG6106111062313 Micromonas pusilla CCMP1545 chloroplast
204NC_012615TG6543055431511 Megaleranthis saniculifolia chloroplast
205NC_012615TG6677016771111 Megaleranthis saniculifolia chloroplast
206NC_012927TG6421464215611 Bambusa oldhamii chloroplast
207NC_013088TG6423114232111 Dendrocalamus latiflorus chloroplast
208NC_013273TG6426914270111 Coix lacryma-jobi chloroplast
209NC_013823TG6433084331811 Typha latifolia chloroplast
210NC_013823TG611877611878611 Typha latifolia chloroplast
211NC_014056TG6401694017911 Oncidium Gower Ramsey chloroplast
212NC_014057TG6327473275711 Pisum sativum chloroplast
213NC_014062TG6422064221611 Anomochloa marantoidea chloroplast