ChloroMitoSSRDB 2.0 - Database of Microsatellites from Chloroplast & Mitochondrial Genomes

Mitochondria Motifs - Perfect CAA Repeats

S.No	Sequence ID	Motif	Iterations	Start	End	Tract Length	Sequence Name
1	NC_011718	CAA	8	18536	18559	24	Aegotheles cristatus mitochondrion
2	NC_016182	CAA	5	14870	14884	15	Pielomastax zhengi mitochondrion
3	NC_018554	CAA	5	280848	280862	15	Malus x domestica mitochondrion
4	NC_007980	CAA	5	11570	11584	15	Nautilus macromphalus mitochondrion
5	NC_011827	CAA	5	15002	15016	15	Phlaeoba albonema mitochondrion
6	NC_006331	CAA	4	13591	13602	12	Rhyacotriton variegatus mitochondrion
7	NC_008151	CAA	4	33450	33461	12	Trichoplax adhaerens mitochondrion
8	NC_013985	CAA	4	13739	13750	12	Sibon nebulatus mitochondrion
9	NC_007980	CAA	4	9152	9163	12	Nautilus macromphalus mitochondrion
10	NC_007399	CAA	4	13426	13437	12	Python regius mitochondrion
11	NC_007393	CAA	4	4585	4596	12	Rousettus aegyptiacus mitochondrion
12	NC_006339	CAA	4	10638	10649	12	Desmognathus fuscus mitochondrion
13	NC_006336	CAA	4	4022	4033	12	Thorius n. sp. RLM-2004 mitochondrion
14	NC_013988	CAA	4	11155	11166	12	Imantodes cenchoa mitochondrion
15	NC_005035	CAA	4	4608	4619	12	Mogera wogura mitochondrion
16	NC_004593	CAA	4	3595	3606	12	Esox lucius mitochondrion
17	NC_001945	CAA	4	13403	13414	12	Dinodon semicarinatus mitochondrion
18	NC_001821	CAA	4	4589	4600	12	Dasypus novemcinctus mitochondrion
19	NC_022146	CAA	4	13380	13391	12	Oocatochus rufodorsatus mitochondrion
20	NC_013622	CAA	4	5017	5028	12	Moringua edwardsi mitochondrion
21	NC_012906	CAA	4	1117	1128	12	Gillichthys mirabilis mitochondrion
22	NC_012816	CAA	4	12780	12791	12	Thermophis zhaoermii mitochondrion
23	NC_012816	CAA	4	5132	5143	12	Thermophis zhaoermii mitochondrion
24	NC_012770	CAA	4	13354	13365	12	Elaphe poryphyracea mitochondrion
25	NC_012680	CAA	4	1112	1123	12	Makaira mazara mitochondrion
26	NC_012675	CAA	4	1112	1123	12	Makaira indica mitochondrion
27	NC_012444	CAA	4	14683	14694	12	Chamaeleo zeylanicus mitochondrion
28	NC_013615	CAA	4	16624	16635	12	Leptocephalus sp. 'type II larva' (Smith, 1989) mitochondrion
29	NC_013481	CAA	4	5577	5588	12	Micrurus fulvius mitochondrion
30	NC_011389	CAA	4	5040	5051	12	Naja atra mitochondrion
31	NC_013847	CAA	4	14970	14981	12	Gomphocerus licenti mitochondrion
32	NC_010225	CAA	4	5039	5050	12	Naja naja mitochondrion
33	NC_021103	CAA	4	14964	14975	12	Gomphocerus sibiricus mitochondrion
34	NC_009985	CAA	4	6208	6219	12	Pseudocellus pearsei mitochondrion
35	NC_009769	CAA	4	12884	12895	12	Pantherophis slowinskii mitochondrion
36	NC_009090	CAA	4	4818	4829	12	Oscarella carmela mitochondrion
37	NC_013816	CAA	4	340027	340038	12	Oryza rufipogon mitochondrion
38	NC_015896	CAA	4	8590	8601	12	Octopus minor mitochondrion
39	NC_015800	CAA	4	12714	12725	12	Coptotermes formosanus mitochondrion
40	NC_014888	CAA	4	4761	4772	12	Oscarella tuberculata mitochondrion
41	NC_014886	CAA	4	4825	4836	12	Oscarella malakhovi mitochondrion
42	NC_014863	CAA	4	4762	4773	12	Oscarella lobularis mitochondrion
43	NC_014268	CAA	4	12143	12154	12	Pellona flavipinnis mitochondrion
44	NC_014050	CAA	4	676643	676654	12	Cucurbita pepo mitochondrion
45	NC_013816	CAA	4	408549	408560	12	Oryza rufipogon mitochondrion
46	NC_016005	CAA	4	950453	950464	12	Cucumis sativus mitochondrion chromosome 1
47	NC_013816	CAA	4	76601	76612	12	Oryza rufipogon mitochondrion
48	NC_012643	CAA	4	26759	26770	12	Micromonas sp. RCC299 mitochondrion
49	NC_011212	CAA	4	890	901	12	Blastocystis sp. DMP/02-328 mitochondrion
50	NC_011033	CAA	4	227762	227773	12	Oryza sativa Japonica Group mitochondrion
51	NC_010303	CAA	4	316988	316999	12	Cycas taitungensis mitochondrion
52	NC_010303	CAA	4	237910	237921	12	Cycas taitungensis mitochondrion
53	NC_008362	CAA	4	248893	248904	12	Tripsacum dactyloides mitochondrion
54	NC_007886	CAA	4	228713	228724	12	Oryza sativa Indica Group mitochondrion
55	NC_018128	CAA	4	11554	11565	12	Macrotermes subhyalinus mitochondrion
56	NC_007579	CAA	4	33510	33521	12	Triticum aestivum mitochondrion
57	NC_020772	CAA	4	6249	6260	12	Chauliops fallax mitochondrion
58	NC_020340	CAA	4	14382	14393	12	Phrynocephalus axillaris mitochondrion
59	NC_020310	CAA	4	7713	7724	12	Rimicaris kairei mitochondrion
60	NC_019642	CAA	4	6339	6350	12	Argas africolumbae mitochondrion
61	NC_018778	CAA	4	7732	7743	12	Alvinocaris chelys mitochondrion
62	NC_018554	CAA	4	190500	190511	12	Malus x domestica mitochondrion
63	NC_018365	CAA	4	96674	96685	12	Lentinula edodes mitochondrion
64	NC_021404	CAA	4	2034	2045	12	Lamprotula tortuosa mitochondrion
65	NC_018127	CAA	4	12729	12740	12	Heterotermes sp. SLC-2012 mitochondrion
66	NC_017608	CAA	4	9883	9894	12	Labeo rohita mitochondrion
67	NC_016742	CAA	4	320519	320530	12	Millettia pinnata mitochondrion
68	NC_016742	CAA	4	232161	232172	12	Millettia pinnata mitochondrion
69	NC_016375	CAA	4	74460	74471	12	Silene noctiflora mitochondrion chromosome 50
70	NC_016349	CAA	4	49637	49648	12	Silene noctiflora mitochondrion chromosome 10
71	NC_016252	CAA	4	48853	48864	12	Silene conica mitochondrion chromosome 112

ChloroMitoSSRDB 2.0 Webserver cum Database of Cholorplast and Mitochondrial Microsatellites

Mitochondria Motifs - Perfect CAA Repeats