ChloroMitoSSRDB 2.0 - Database of Microsatellites from Chloroplast & Mitochondrial Genomes

Mitochondria Motifs - Perfect AGA Repeats

S.No	Sequence ID	Motif	Iterations	Start	End	Tract Length	Sequence Name
1	NC_014050	AGA	8	587262	587285	24	Cucurbita pepo mitochondrion
2	NC_014050	AGA	7	588439	588459	21	Cucurbita pepo mitochondrion
3	NC_013839	AGA	6	6193	6210	18	Candida sojae mitochondrion
4	NC_014050	AGA	6	827251	827268	18	Cucurbita pepo mitochondrion
5	NC_016005	AGA	6	201643	201660	18	Cucumis sativus mitochondrion chromosome 1
6	NC_016354	AGA	6	60915	60932	18	Silene noctiflora mitochondrion chromosome 30
7	NC_003052	AGA	5	11053	11067	15	Spizellomyces punctatus mitochondrion chromosome 1
8	NC_007787	AGA	5	5335	5349	15	Dictyostelium citrinum mitochondrion
9	NC_014043	AGA	5	249017	249031	15	Citrullus lanatus mitochondrion
10	NC_014050	AGA	5	114127	114141	15	Cucurbita pepo mitochondrion
11	NC_014050	AGA	5	453391	453405	15	Cucurbita pepo mitochondrion
12	NC_014050	AGA	5	514461	514475	15	Cucurbita pepo mitochondrion
13	NC_014050	AGA	5	586274	586288	15	Cucurbita pepo mitochondrion
14	NC_014050	AGA	5	621397	621411	15	Cucurbita pepo mitochondrion
15	NC_014050	AGA	5	684366	684380	15	Cucurbita pepo mitochondrion
16	NC_014050	AGA	5	889909	889923	15	Cucurbita pepo mitochondrion
17	NC_014050	AGA	5	930803	930817	15	Cucurbita pepo mitochondrion
18	NC_014050	AGA	5	969082	969096	15	Cucurbita pepo mitochondrion
19	NC_016004	AGA	5	21092	21106	15	Cucumis sativus mitochondrion chromosome 2
20	NC_016005	AGA	5	156702	156716	15	Cucumis sativus mitochondrion chromosome 1
21	NC_016308	AGA	5	55764	55778	15	Silene conica mitochondrion chromosome 17
22	NC_008074	AGA	5	6079	6093	15	Schistosoma haematobium mitochondrion
23	NC_000862	AGA	4	27114	27125	12	Tetrahymena pyriformis mitochondrion
24	NC_001324	AGA	4	37089	37100	12	Paramecium aurelia mitochondrion
25	NC_002511	AGA	4	143502	143513	12	Beta vulgaris subsp. vulgaris mitochondrion
26	NC_002573	AGA	4	22185	22196	12	Naegleria gruberi mitochondrion
27	NC_003029	AGA	4	27440	27451	12	Tetrahymena thermophila mitochondrion
28	NC_007886	AGA	4	89478	89489	12	Oryza sativa Indica Group mitochondrion
29	NC_007982	AGA	4	241642	241653	12	Zea mays subsp. mays mitochondrion
30	NC_008331	AGA	4	353585	353596	12	Zea perennis mitochondrion
31	NC_008332	AGA	4	87030	87041	12	Zea mays subsp. parviglumis mitochondrion
32	NC_008332	AGA	4	348435	348446	12	Zea mays subsp. parviglumis mitochondrion
33	NC_008333	AGA	4	314179	314190	12	Zea luxurians mitochondrion
34	NC_008337	AGA	4	27405	27416	12	Tetrahymena malaccensis mitochondrion
35	NC_008338	AGA	4	27233	27244	12	Tetrahymena paravorax mitochondrion
36	NC_008339	AGA	4	26777	26788	12	Tetrahymena pigmentosa mitochondrion
37	NC_008360	AGA	4	28778	28789	12	Sorghum bicolor mitochondrion
38	NC_011033	AGA	4	88945	88956	12	Oryza sativa Japonica Group mitochondrion
39	NC_012116	AGA	4	85977	85988	12	Carica papaya mitochondrion
40	NC_012116	AGA	4	287477	287488	12	Carica papaya mitochondrion
41	NC_012119	AGA	4	154687	154698	12	Vitis vinifera mitochondrion
42	NC_012119	AGA	4	278483	278494	12	Vitis vinifera mitochondrion
43	NC_012119	AGA	4	666430	666441	12	Vitis vinifera mitochondrion
44	NC_013765	AGA	4	38064	38075	12	Phaeoceros laevis mitochondrion
45	NC_013816	AGA	4	26557	26568	12	Oryza rufipogon mitochondrion
46	NC_013816	AGA	4	215318	215329	12	Oryza rufipogon mitochondrion
47	NC_013839	AGA	4	14846	14857	12	Candida sojae mitochondrion
48	NC_014050	AGA	4	91847	91858	12	Cucurbita pepo mitochondrion
49	NC_014050	AGA	4	334204	334215	12	Cucurbita pepo mitochondrion
50	NC_014050	AGA	4	376967	376978	12	Cucurbita pepo mitochondrion
51	NC_014050	AGA	4	384818	384829	12	Cucurbita pepo mitochondrion
52	NC_014050	AGA	4	388295	388306	12	Cucurbita pepo mitochondrion
53	NC_014050	AGA	4	418898	418909	12	Cucurbita pepo mitochondrion
54	NC_014050	AGA	4	466577	466588	12	Cucurbita pepo mitochondrion
55	NC_014050	AGA	4	467535	467546	12	Cucurbita pepo mitochondrion
56	NC_014050	AGA	4	512322	512333	12	Cucurbita pepo mitochondrion
57	NC_014050	AGA	4	542419	542430	12	Cucurbita pepo mitochondrion
58	NC_014050	AGA	4	550616	550627	12	Cucurbita pepo mitochondrion
59	NC_014050	AGA	4	568833	568844	12	Cucurbita pepo mitochondrion
60	NC_014050	AGA	4	643335	643346	12	Cucurbita pepo mitochondrion
61	NC_014050	AGA	4	731573	731584	12	Cucurbita pepo mitochondrion
62	NC_014050	AGA	4	739045	739056	12	Cucurbita pepo mitochondrion
63	NC_014050	AGA	4	755150	755161	12	Cucurbita pepo mitochondrion
64	NC_014050	AGA	4	850139	850150	12	Cucurbita pepo mitochondrion
65	NC_014050	AGA	4	885725	885736	12	Cucurbita pepo mitochondrion
66	NC_014050	AGA	4	917792	917803	12	Cucurbita pepo mitochondrion
67	NC_014050	AGA	4	920447	920458	12	Cucurbita pepo mitochondrion
68	NC_014050	AGA	4	937444	937455	12	Cucurbita pepo mitochondrion
69	NC_014262	AGA	4	42780	42791	12	Paramecium caudatum mitochondrion
70	NC_014489	AGA	4	68179	68190	12	Glomus irregulare mitochondrion
71	NC_015099	AGA	4	73399	73410	12	Beta vulgaris subsp. maritima mitochondrion
72	NC_015994	AGA	4	63020	63031	12	Beta macrocarpa mitochondrion
73	NC_015994	AGA	4	126270	126281	12	Beta macrocarpa mitochondrion
74	NC_016004	AGA	4	58054	58065	12	Cucumis sativus mitochondrion chromosome 2
75	NC_016004	AGA	4	81687	81698	12	Cucumis sativus mitochondrion chromosome 2
76	NC_016005	AGA	4	82162	82173	12	Cucumis sativus mitochondrion chromosome 1
77	NC_016005	AGA	4	95840	95851	12	Cucumis sativus mitochondrion chromosome 1
78	NC_016005	AGA	4	149097	149108	12	Cucumis sativus mitochondrion chromosome 1
79	NC_016005	AGA	4	192769	192780	12	Cucumis sativus mitochondrion chromosome 1
80	NC_016005	AGA	4	229610	229621	12	Cucumis sativus mitochondrion chromosome 1
81	NC_016005	AGA	4	232957	232968	12	Cucumis sativus mitochondrion chromosome 1
82	NC_016005	AGA	4	264829	264840	12	Cucumis sativus mitochondrion chromosome 1
83	NC_016005	AGA	4	330906	330917	12	Cucumis sativus mitochondrion chromosome 1
84	NC_016005	AGA	4	377400	377411	12	Cucumis sativus mitochondrion chromosome 1
85	NC_016005	AGA	4	392528	392539	12	Cucumis sativus mitochondrion chromosome 1
86	NC_016005	AGA	4	500571	500582	12	Cucumis sativus mitochondrion chromosome 1
87	NC_016005	AGA	4	510886	510897	12	Cucumis sativus mitochondrion chromosome 1
88	NC_016005	AGA	4	527439	527450	12	Cucumis sativus mitochondrion chromosome 1
89	NC_016005	AGA	4	542347	542358	12	Cucumis sativus mitochondrion chromosome 1
90	NC_016005	AGA	4	653255	653266	12	Cucumis sativus mitochondrion chromosome 1
91	NC_016005	AGA	4	675815	675826	12	Cucumis sativus mitochondrion chromosome 1
92	NC_016005	AGA	4	688831	688842	12	Cucumis sativus mitochondrion chromosome 1
93	NC_016005	AGA	4	770872	770883	12	Cucumis sativus mitochondrion chromosome 1
94	NC_016005	AGA	4	1033481	1033492	12	Cucumis sativus mitochondrion chromosome 1
95	NC_016005	AGA	4	1044837	1044848	12	Cucumis sativus mitochondrion chromosome 1
96	NC_016005	AGA	4	1101191	1101202	12	Cucumis sativus mitochondrion chromosome 1
97	NC_016005	AGA	4	1113226	1113237	12	Cucumis sativus mitochondrion chromosome 1
98	NC_016005	AGA	4	1118775	1118786	12	Cucumis sativus mitochondrion chromosome 1
99	NC_016005	AGA	4	1175671	1175682	12	Cucumis sativus mitochondrion chromosome 1
100	NC_016005	AGA	4	1209931	1209942	12	Cucumis sativus mitochondrion chromosome 1
101	NC_016005	AGA	4	1323176	1323187	12	Cucumis sativus mitochondrion chromosome 1
102	NC_016005	AGA	4	1454071	1454082	12	Cucumis sativus mitochondrion chromosome 1
103	NC_016005	AGA	4	1475705	1475716	12	Cucumis sativus mitochondrion chromosome 1
104	NC_016006	AGA	4	4024	4035	12	Cucumis sativus mitochondrion chromosome 3
105	NC_016177	AGA	4	40893	40904	12	Silene conica mitochondrion chromosome 87
106	NC_016210	AGA	4	74057	74068	12	Silene conica mitochondrion chromosome 59
107	NC_016212	AGA	4	9563	9574	12	Silene conica mitochondrion chromosome 5
108	NC_016214	AGA	4	50407	50418	12	Silene conica mitochondrion chromosome 102
109	NC_016214	AGA	4	58517	58528	12	Silene conica mitochondrion chromosome 102
110	NC_016215	AGA	4	11936	11947	12	Silene conica mitochondrion
111	NC_016220	AGA	4	4352	4363	12	Silene conica mitochondrion chromosome 4
112	NC_016221	AGA	4	63569	63580	12	Silene conica mitochondrion chromosome 3
113	NC_016233	AGA	4	84526	84537	12	Silene conica mitochondrion chromosome 18
114	NC_016233	AGA	4	106221	106232	12	Silene conica mitochondrion chromosome 18
115	NC_016235	AGA	4	84014	84025	12	Silene conica mitochondrion chromosome 7
116	NC_016236	AGA	4	37567	37578	12	Silene conica mitochondrion chromosome 55
117	NC_016244	AGA	4	1299	1310	12	Silene conica mitochondrion chromosome 39
118	NC_016245	AGA	4	50602	50613	12	Silene conica mitochondrion chromosome 48
119	NC_016257	AGA	4	83108	83119	12	Silene conica mitochondrion chromosome 54
120	NC_016261	AGA	4	22751	22762	12	Silene conica mitochondrion chromosome 41
121	NC_016269	AGA	4	47582	47593	12	Silene conica mitochondrion chromosome 86
122	NC_016272	AGA	4	35018	35029	12	Silene conica mitochondrion chromosome 8
123	NC_016274	AGA	4	70141	70152	12	Silene conica mitochondrion chromosome 79
124	NC_016275	AGA	4	18226	18237	12	Silene conica mitochondrion chromosome 95
125	NC_016275	AGA	4	60483	60494	12	Silene conica mitochondrion chromosome 95
126	NC_016276	AGA	4	1841	1852	12	Silene conica mitochondrion chromosome 74
127	NC_016276	AGA	4	72570	72581	12	Silene conica mitochondrion chromosome 74
128	NC_016278	AGA	4	86696	86707	12	Silene conica mitochondrion chromosome 10
129	NC_016281	AGA	4	49705	49716	12	Silene conica mitochondrion chromosome 85
130	NC_016283	AGA	4	25750	25761	12	Silene conica mitochondrion chromosome 109
131	NC_016286	AGA	4	6806	6817	12	Silene conica mitochondrion chromosome 103
132	NC_016287	AGA	4	59120	59131	12	Silene conica mitochondrion chromosome 69
133	NC_016293	AGA	4	2249	2260	12	Silene conica mitochondrion chromosome 19
134	NC_016296	AGA	4	8590	8601	12	Silene conica mitochondrion chromosome 122
135	NC_016303	AGA	4	53007	53018	12	Silene conica mitochondrion chromosome 33
136	NC_016320	AGA	4	641	652	12	Silene conica mitochondrion chromosome 81
137	NC_016322	AGA	4	21680	21691	12	Silene conica mitochondrion chromosome 126
138	NC_016328	AGA	4	47989	48000	12	Silene conica mitochondrion
139	NC_016330	AGA	4	44567	44578	12	Silene conica mitochondrion chromosome 116
140	NC_016349	AGA	4	25848	25859	12	Silene noctiflora mitochondrion chromosome 10
141	NC_016351	AGA	4	3392	3403	12	Silene noctiflora mitochondrion chromosome 43
142	NC_016353	AGA	4	38138	38149	12	Silene noctiflora mitochondrion chromosome 46
143	NC_016356	AGA	4	23412	23423	12	Silene noctiflora mitochondrion chromosome 38
144	NC_016358	AGA	4	72269	72280	12	Silene noctiflora mitochondrion chromosome 47
145	NC_016363	AGA	4	126252	126263	12	Silene noctiflora mitochondrion chromosome 13
146	NC_016367	AGA	4	48222	48233	12	Silene noctiflora mitochondrion chromosome 52
147	NC_016369	AGA	4	92122	92133	12	Silene noctiflora mitochondrion chromosome 49
148	NC_016376	AGA	4	80442	80453	12	Silene noctiflora mitochondrion chromosome 42
149	NC_016376	AGA	4	80945	80956	12	Silene noctiflora mitochondrion chromosome 42
150	NC_016379	AGA	4	85471	85482	12	Silene noctiflora mitochondrion chromosome 39
151	NC_016384	AGA	4	85253	85264	12	Silene noctiflora mitochondrion chromosome 15
152	NC_016385	AGA	4	76665	76676	12	Silene noctiflora mitochondrion chromosome 55
153	NC_016389	AGA	4	44093	44104	12	Silene noctiflora mitochondrion chromosome 21
154	NC_016392	AGA	4	28758	28769	12	Silene noctiflora mitochondrion chromosome 45
155	NC_016393	AGA	4	36439	36450	12	Silene noctiflora mitochondrion chromosome 1
156	NC_016398	AGA	4	88974	88985	12	Silene noctiflora mitochondrion chromosome 19
157	NC_016740	AGA	4	144663	144674	12	Phoenix dactylifera mitochondrion
158	NC_016741	AGA	4	27280	27291	12	Boea hygrometrica mitochondrion
159	NC_016741	AGA	4	412598	412609	12	Boea hygrometrica mitochondrion
160	NC_016742	AGA	4	92585	92596	12	Millettia pinnata mitochondrion
161	NC_016742	AGA	4	359630	359641	12	Millettia pinnata mitochondrion
162	NC_017841	AGA	4	39934	39945	12	Helicosporidium sp. ex Simulium jonesi mitochondrion
163	NC_018041	AGA	4	28190	28201	12	Mimulus guttatus mitochondrion
164	NC_018049	AGA	4	4556	4567	12	Celastrina hersilia mitochondrion
165	NC_020353	AGA	4	67714	67725	12	Microbotryum lychnidis-dioicae strain MvSl135HT1 mitochondrion
166	NC_020455	AGA	4	106418	106429	12	Glycine max mitochondrion
167	NC_020779	AGA	4	4564	4575	12	Cupido argiades mitochondrion
168	NC_021092	AGA	4	32080	32091	12	Vigna angularis mitochondrial DNA
169	NC_021092	AGA	4	177480	177491	12	Vigna angularis mitochondrial DNA
170	NC_021152	AGA	4	357471	357482	12	Liriodendron tulipifera mitochondrion
171	NC_021399	AGA	4	276878	276889	12	Butomus umbellatus mitochondrion
172	NC_021399	AGA	4	448556	448567	12	Butomus umbellatus mitochondrion
173	NC_006515	AGA	4	6001	6012	12	Mesobuthus gibbosus mitochondrion
174	NC_007884	AGA	4	862	873	12	Campanulotes bidentatus compar mitochondrion
175	NC_007933	AGA	4	13645	13656	12	Orbinia latreillii mitochondrion
176	NC_009500	AGA	4	15542	15553	12	Reticulitermes virginicus mitochondrion
177	NC_009500	AGA	4	16092	16103	12	Reticulitermes virginicus mitochondrion
178	NC_012455	AGA	4	2862	2873	12	Paracyclopina nana mitochondrion

ChloroMitoSSRDB 2.0 Webserver cum Database of Cholorplast and Mitochondrial Microsatellites

Mitochondria Motifs - Perfect AGA Repeats