ChloroMitoSSRDB 2.0 - Database of Microsatellites from Chloroplast & Mitochondrial Genomes

Mitochondria Motifs - Perfect AAGA Repeats

S.No	Sequence ID	Motif	Iterations	Start	End	Tract Length	Sequence Name
1	NC_014050	AAGA	5	78266	78285	20	Cucurbita pepo mitochondrion
2	NC_008331	AAGA	4	536724	536739	16	Zea perennis mitochondrion
3	NC_014050	AAGA	4	685331	685346	16	Cucurbita pepo mitochondrion
4	NC_001284	AAGA	3	87958	87969	12	Arabidopsis thaliana mitochondrion
5	NC_001284	AAGA	3	139138	139149	12	Arabidopsis thaliana mitochondrion
6	NC_002511	AAGA	3	188213	188224	12	Beta vulgaris subsp. vulgaris mitochondrion
7	NC_007787	AAGA	3	8690	8701	12	Dictyostelium citrinum mitochondrion
8	NC_007886	AAGA	3	228178	228189	12	Oryza sativa Indica Group mitochondrion
9	NC_007886	AAGA	3	372925	372936	12	Oryza sativa Indica Group mitochondrion
10	NC_007886	AAGA	3	454038	454049	12	Oryza sativa Indica Group mitochondrion
11	NC_007982	AAGA	3	504782	504793	12	Zea mays subsp. mays mitochondrion
12	NC_008285	AAGA	3	1316	1327	12	Brassica napus mitochondrion
13	NC_008285	AAGA	3	27008	27019	12	Brassica napus mitochondrion
14	NC_008331	AAGA	3	212341	212352	12	Zea perennis mitochondrion
15	NC_008332	AAGA	3	550228	550239	12	Zea mays subsp. parviglumis mitochondrion
16	NC_008332	AAGA	3	658115	658126	12	Zea mays subsp. parviglumis mitochondrion
17	NC_008333	AAGA	3	434832	434843	12	Zea luxurians mitochondrion
18	NC_008362	AAGA	3	203053	203064	12	Tripsacum dactyloides mitochondrion
19	NC_008362	AAGA	3	225663	225674	12	Tripsacum dactyloides mitochondrion
20	NC_008362	AAGA	3	276472	276483	12	Tripsacum dactyloides mitochondrion
21	NC_008362	AAGA	3	310602	310613	12	Tripsacum dactyloides mitochondrion
22	NC_008362	AAGA	3	514753	514764	12	Tripsacum dactyloides mitochondrion
23	NC_008362	AAGA	3	537363	537374	12	Tripsacum dactyloides mitochondrion
24	NC_010222	AAGA	3	1936	1947	12	Mycosphaerella graminicola mitochondrion
25	NC_010303	AAGA	3	27720	27731	12	Cycas taitungensis mitochondrion
26	NC_010303	AAGA	3	201729	201740	12	Cycas taitungensis mitochondrion
27	NC_010303	AAGA	3	348476	348487	12	Cycas taitungensis mitochondrion
28	NC_011033	AAGA	3	227227	227238	12	Oryza sativa Japonica Group mitochondrion
29	NC_011033	AAGA	3	371962	371973	12	Oryza sativa Japonica Group mitochondrion
30	NC_011033	AAGA	3	453046	453057	12	Oryza sativa Japonica Group mitochondrion
31	NC_012116	AAGA	3	344830	344841	12	Carica papaya mitochondrion
32	NC_012119	AAGA	3	604487	604498	12	Vitis vinifera mitochondrion
33	NC_012119	AAGA	3	653765	653776	12	Vitis vinifera mitochondrion
34	NC_013765	AAGA	3	46863	46874	12	Phaeoceros laevis mitochondrion
35	NC_013816	AAGA	3	76066	76077	12	Oryza rufipogon mitochondrion
36	NC_014043	AAGA	3	130607	130618	12	Citrullus lanatus mitochondrion
37	NC_014050	AAGA	3	173989	174000	12	Cucurbita pepo mitochondrion
38	NC_014050	AAGA	3	291530	291541	12	Cucurbita pepo mitochondrion
39	NC_014050	AAGA	3	369086	369097	12	Cucurbita pepo mitochondrion
40	NC_014050	AAGA	3	536790	536801	12	Cucurbita pepo mitochondrion
41	NC_014050	AAGA	3	539545	539556	12	Cucurbita pepo mitochondrion
42	NC_014050	AAGA	3	564521	564532	12	Cucurbita pepo mitochondrion
43	NC_014050	AAGA	3	641078	641089	12	Cucurbita pepo mitochondrion
44	NC_014050	AAGA	3	675342	675353	12	Cucurbita pepo mitochondrion
45	NC_014050	AAGA	3	725271	725282	12	Cucurbita pepo mitochondrion
46	NC_014050	AAGA	3	937868	937879	12	Cucurbita pepo mitochondrion
47	NC_014050	AAGA	3	939569	939580	12	Cucurbita pepo mitochondrion
48	NC_015099	AAGA	3	118151	118162	12	Beta vulgaris subsp. maritima mitochondrion
49	NC_015141	AAGA	3	185079	185090	12	Ricinus communis mitochondrion
50	NC_015141	AAGA	3	319731	319742	12	Ricinus communis mitochondrion
51	NC_015994	AAGA	3	376915	376926	12	Beta macrocarpa mitochondrion
52	NC_016005	AAGA	3	51730	51741	12	Cucumis sativus mitochondrion chromosome 1
53	NC_016005	AAGA	3	524753	524764	12	Cucumis sativus mitochondrion chromosome 1
54	NC_016005	AAGA	3	674089	674100	12	Cucumis sativus mitochondrion chromosome 1
55	NC_016005	AAGA	3	982980	982991	12	Cucumis sativus mitochondrion chromosome 1
56	NC_016005	AAGA	3	997138	997149	12	Cucumis sativus mitochondrion chromosome 1
57	NC_016005	AAGA	3	1150091	1150102	12	Cucumis sativus mitochondrion chromosome 1
58	NC_016005	AAGA	3	1371267	1371278	12	Cucumis sativus mitochondrion chromosome 1
59	NC_016118	AAGA	3	103840	103851	12	Brassica oleracea mitochondrion
60	NC_016118	AAGA	3	160807	160818	12	Brassica oleracea mitochondrion
61	NC_016118	AAGA	3	273872	273883	12	Brassica oleracea mitochondrion
62	NC_016123	AAGA	3	15393	15404	12	Brassica juncea mitochondrion
63	NC_016123	AAGA	3	41101	41112	12	Brassica juncea mitochondrion
64	NC_016125	AAGA	3	15390	15401	12	Brassica rapa subsp. campestris mitochondrion
65	NC_016125	AAGA	3	41097	41108	12	Brassica rapa subsp. campestris mitochondrion
66	NC_016206	AAGA	3	41402	41413	12	Silene conica mitochondrion chromosome 93
67	NC_016209	AAGA	3	34642	34653	12	Silene conica mitochondrion chromosome 31
68	NC_016214	AAGA	3	48833	48844	12	Silene conica mitochondrion chromosome 102
69	NC_016220	AAGA	3	44423	44434	12	Silene conica mitochondrion chromosome 4
70	NC_016221	AAGA	3	60978	60989	12	Silene conica mitochondrion chromosome 3
71	NC_016221	AAGA	3	61214	61225	12	Silene conica mitochondrion chromosome 3
72	NC_016222	AAGA	3	63900	63911	12	Silene conica mitochondrion chromosome 64
73	NC_016225	AAGA	3	27202	27213	12	Silene conica mitochondrion chromosome 23
74	NC_016226	AAGA	3	101249	101260	12	Silene conica mitochondrion chromosome 12
75	NC_016227	AAGA	3	70686	70697	12	Silene conica mitochondrion chromosome 11
76	NC_016227	AAGA	3	123481	123492	12	Silene conica mitochondrion chromosome 11
77	NC_016228	AAGA	3	61357	61368	12	Silene conica mitochondrion chromosome 14
78	NC_016228	AAGA	3	63455	63466	12	Silene conica mitochondrion chromosome 14
79	NC_016228	AAGA	3	75931	75942	12	Silene conica mitochondrion chromosome 14
80	NC_016231	AAGA	3	72878	72889	12	Silene conica mitochondrion chromosome 16
81	NC_016232	AAGA	3	106079	106090	12	Silene conica mitochondrion chromosome 13
82	NC_016233	AAGA	3	67442	67453	12	Silene conica mitochondrion chromosome 18
83	NC_016234	AAGA	3	27988	27999	12	Silene conica mitochondrion chromosome 20
84	NC_016236	AAGA	3	72335	72346	12	Silene conica mitochondrion chromosome 55
85	NC_016237	AAGA	3	39229	39240	12	Silene conica mitochondrion chromosome 44
86	NC_016243	AAGA	3	20136	20147	12	Silene conica mitochondrion chromosome 36
87	NC_016243	AAGA	3	93881	93892	12	Silene conica mitochondrion chromosome 36
88	NC_016245	AAGA	3	37022	37033	12	Silene conica mitochondrion chromosome 48
89	NC_016249	AAGA	3	102764	102775	12	Silene conica mitochondrion chromosome 1
90	NC_016249	AAGA	3	103834	103845	12	Silene conica mitochondrion chromosome 1
91	NC_016249	AAGA	3	110976	110987	12	Silene conica mitochondrion chromosome 1
92	NC_016249	AAGA	3	132553	132564	12	Silene conica mitochondrion chromosome 1
93	NC_016250	AAGA	3	26964	26975	12	Silene conica mitochondrion chromosome 34
94	NC_016251	AAGA	3	61805	61816	12	Silene conica mitochondrion chromosome 22
95	NC_016253	AAGA	3	59132	59143	12	Silene conica mitochondrion chromosome 50
96	NC_016260	AAGA	3	79049	79060	12	Silene conica mitochondrion chromosome 40
97	NC_016262	AAGA	3	42304	42315	12	Silene conica mitochondrion chromosome 35
98	NC_016263	AAGA	3	82990	83001	12	Silene conica mitochondrion chromosome 42
99	NC_016267	AAGA	3	13339	13350	12	Silene conica mitochondrion chromosome 82
100	NC_016271	AAGA	3	39566	39577	12	Silene conica mitochondrion chromosome 78
101	NC_016272	AAGA	3	20813	20824	12	Silene conica mitochondrion chromosome 8
102	NC_016281	AAGA	3	72020	72031	12	Silene conica mitochondrion chromosome 85
103	NC_016287	AAGA	3	23101	23112	12	Silene conica mitochondrion chromosome 69
104	NC_016288	AAGA	3	14280	14291	12	Silene conica mitochondrion chromosome 125
105	NC_016289	AAGA	3	51237	51248	12	Silene conica mitochondrion chromosome 68
106	NC_016291	AAGA	3	4921	4932	12	Silene conica mitochondrion chromosome 71
107	NC_016292	AAGA	3	20750	20761	12	Silene conica mitochondrion chromosome 124
108	NC_016298	AAGA	3	77131	77142	12	Silene conica mitochondrion chromosome 43
109	NC_016299	AAGA	3	14036	14047	12	Silene conica mitochondrion chromosome 127
110	NC_016300	AAGA	3	64966	64977	12	Silene conica mitochondrion chromosome 62
111	NC_016302	AAGA	3	71056	71067	12	Silene conica mitochondrion chromosome 32
112	NC_016302	AAGA	3	89073	89084	12	Silene conica mitochondrion chromosome 32
113	NC_016302	AAGA	3	92552	92563	12	Silene conica mitochondrion chromosome 32
114	NC_016304	AAGA	3	34377	34388	12	Silene conica mitochondrion chromosome 76
115	NC_016307	AAGA	3	34900	34911	12	Silene conica mitochondrion chromosome 117
116	NC_016308	AAGA	3	113262	113273	12	Silene conica mitochondrion chromosome 17
117	NC_016312	AAGA	3	13936	13947	12	Silene conica mitochondrion chromosome 51
118	NC_016315	AAGA	3	12726	12737	12	Silene conica mitochondrion chromosome 128
119	NC_016316	AAGA	3	1141	1152	12	Silene conica mitochondrion chromosome 89
120	NC_016321	AAGA	3	9501	9512	12	Silene conica mitochondrion chromosome 101
121	NC_016321	AAGA	3	45717	45728	12	Silene conica mitochondrion chromosome 101
122	NC_016323	AAGA	3	50587	50598	12	Silene conica mitochondrion chromosome 97
123	NC_016327	AAGA	3	5819	5830	12	Silene conica mitochondrion chromosome 96
124	NC_016329	AAGA	3	27316	27327	12	Silene conica mitochondrion chromosome 47
125	NC_016329	AAGA	3	47248	47259	12	Silene conica mitochondrion chromosome 47
126	NC_016343	AAGA	3	7807	7818	12	Silene conica mitochondrion chromosome 75
127	NC_016344	AAGA	3	77241	77252	12	Silene noctiflora mitochondrion chromosome 35
128	NC_016345	AAGA	3	118334	118345	12	Silene noctiflora mitochondrion chromosome 12
129	NC_016348	AAGA	3	18731	18742	12	Silene noctiflora mitochondrion chromosome 3
130	NC_016356	AAGA	3	11083	11094	12	Silene noctiflora mitochondrion chromosome 38
131	NC_016356	AAGA	3	64021	64032	12	Silene noctiflora mitochondrion chromosome 38
132	NC_016358	AAGA	3	1758	1769	12	Silene noctiflora mitochondrion chromosome 47
133	NC_016360	AAGA	3	40395	40406	12	Silene noctiflora mitochondrion chromosome 24
134	NC_016374	AAGA	3	104827	104838	12	Silene noctiflora mitochondrion chromosome 28
135	NC_016377	AAGA	3	47357	47368	12	Silene noctiflora mitochondrion chromosome 11
136	NC_016377	AAGA	3	83859	83870	12	Silene noctiflora mitochondrion chromosome 11
137	NC_016380	AAGA	3	8189	8200	12	Silene noctiflora mitochondrion chromosome 58
138	NC_016384	AAGA	3	123021	123032	12	Silene noctiflora mitochondrion chromosome 15
139	NC_016388	AAGA	3	9191	9202	12	Silene noctiflora mitochondrion chromosome 51
140	NC_016388	AAGA	3	37375	37386	12	Silene noctiflora mitochondrion chromosome 51
141	NC_016393	AAGA	3	32438	32449	12	Silene noctiflora mitochondrion chromosome 1
142	NC_016393	AAGA	3	44178	44189	12	Silene noctiflora mitochondrion chromosome 1
143	NC_016395	AAGA	3	26209	26220	12	Silene noctiflora mitochondrion chromosome 56
144	NC_016396	AAGA	3	51304	51315	12	Silene noctiflora mitochondrion chromosome 2
145	NC_016397	AAGA	3	33451	33462	12	Silene noctiflora mitochondrion chromosome 4
146	NC_016397	AAGA	3	46278	46289	12	Silene noctiflora mitochondrion chromosome 4
147	NC_016397	AAGA	3	88631	88642	12	Silene noctiflora mitochondrion chromosome 4
148	NC_016406	AAGA	3	72036	72047	12	Silene vulgaris mitochondrion chromosome 1
149	NC_016406	AAGA	3	95437	95448	12	Silene vulgaris mitochondrion chromosome 1
150	NC_016741	AAGA	3	96929	96940	12	Boea hygrometrica mitochondrion
151	NC_016743	AAGA	3	57908	57919	12	Lotus japonicus mitochondrion
152	NC_016743	AAGA	3	205170	205181	12	Lotus japonicus mitochondrion
153	NC_016985	AAGA	3	10823	10834	12	Gigaspora rosea mitochondrion
154	NC_017840	AAGA	3	128407	128418	12	Spirodela polyrhiza mitochondrion
155	NC_018041	AAGA	3	267577	267588	12	Mimulus guttatus mitochondrion
156	NC_019576	AAGA	3	11798	11809	12	Laternaria candelaria mitochondrion
157	NC_020353	AAGA	3	104559	104570	12	Microbotryum lychnidis-dioicae strain MvSl135HT1 mitochondrion
158	NC_020370	AAGA	3	54285	54296	12	Ministeria vibrans mitochondrion
159	NC_021124	AAGA	3	52936	52947	12	Andalucia godoyi strain ATCC PRA-185 mitochondrion
160	NC_021125	AAGA	3	59476	59487	12	Histiona aroides mitochondrion
161	NC_021127	AAGA	3	24307	24318	12	Jakoba libera strain ATCC 50422 mitochondrion
162	NC_002184	AAGA	3	9421	9432	12	Penaeus monodon mitochondrion
163	NC_003160	AAGA	3	871	882	12	Chlorophthalmus agassizi mitochondrion
164	NC_011927	AAGA	3	1981	1992	12	Oxymonacanthus longirostris mitochondrion
165	NC_011929	AAGA	3	1797	1808	12	Paraluteres prionurus mitochondrion
166	NC_011932	AAGA	3	1794	1805	12	Pervagor janthinosoma mitochondrion
167	NC_011940	AAGA	3	1795	1806	12	Brachaluteres ulvarum mitochondrion
168	NC_011951	AAGA	3	1801	1812	12	Chaetodermis penicilligerus mitochondrion

ChloroMitoSSRDB 2.0 Webserver cum Database of Cholorplast and Mitochondrial Microsatellites

Mitochondria Motifs - Perfect AAGA Repeats