ChloroMitoSSRDB 2.00 Webserver cum Database of Cholorplast and Mitochondrial Microsatellites

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Chloroplast Motifs - Perfect (AAAG) Repeats

S.NoSequence IDSSRSSR TypeTract LengthStartEndSequence Name
1NC_021648(AAAG)3p4121276512776Glycine dolichocarpa voucher CSIRO:G1134 chloroplast
2NC_021441(AAAG)3p4128088980900Taiwania flousiana chloroplast
3NC_021439(AAAG)3p412110302110313Pinus massoniana chloroplast
4NC_021438(AAAG)3p412107274107285Gnetum montanum chloroplast
5NC_021433(AAAG)3p4123197031981Cymbidium mannii voucher KUN:YJB100602 chloroplast
6NC_021432(AAAG)3p4122238022391Cymbidium tracyanum voucher KUN:YJB100606 chloroplast
7NC_021432(AAAG)3p4123630336314Cymbidium tracyanum voucher KUN:YJB100606 chloroplast
8NC_021429(AAAG)3p4123206432075Cymbidium aloifolium voucher KUN:YJB100604 chloroplast
9NC_021426(AAAG)3p4127053670547Trochodendron aralioides chloroplast
10NC_021423(AAAG)3p412111365111376Catharanthus roseus cultivar Pacifica Punch Halo chloroplast
11NC_021372(AAAG)3p41233963407Pharus latifolius chloroplast
12NC_019649(AAAG)3p4126622466235Festuca ovina plastid
13NC_018114(AAAG)3p4124831348324Erycina pusilla chloroplast
14NC_018051(AAAG)3p412116911116922Vigna unguiculata chloroplast
15NC_016736(AAAG)3p4122451924530Ricinus communis chloroplast
16NC_016430(AAAG)3p4127281572826Eleutherococcus senticosus chloroplast
17NC_016069(AAAG)3p4121918419195Picea morrisonicola chloroplast
18NC_016065(AAAG)3p4128185281863Taiwania cryptomerioides chloroplast DNA
19NC_016064(AAAG)3p412112217112228Pseudotsuga sinensis var. wilsoniana chloroplast
20NC_016058(AAAG)3p4128120381214Larix decidua chloroplast
21NC_015830(AAAG)3p4121892718938Bambusa emeiensis chloroplast
22NC_015623(AAAG)3p4127287972890Olea europaea subsp. maroccana chloroplast
23NC_015621(AAAG)3p4123219832209Ageratina adenophora chloroplast
24NC_015608(AAAG)3p4127295972970Olea woodiana subsp. woodiana chloroplast
25NC_015604(AAAG)3p4127286372874Olea europaea subsp. cuspidata chloroplast
26NC_015401(AAAG)3p4127286872879Olea europaea subsp. europaea plastid
27NC_015359(AAAG)3p4126587265883Chlorella variabilis plastid
28NC_015084(AAAG)3p412108917108928Coccomyxa sp. C-169 plastid
29NC_014807(AAAG)3p4122503925050Corynocarpus laevigata chloroplast
30NC_014569(AAAG)3p4122576025771Erodium texanum plastid
31NC_014346(AAAG)3p4126457464585Floydiella terrestris chloroplast
32NC_014346(AAAG)3p4126994569956Floydiella terrestris chloroplast
33NC_014346(AAAG)3p412228661228672Floydiella terrestris chloroplast
34NC_014346(AAAG)3p412259237259248Floydiella terrestris chloroplast
35NC_014346(AAAG)3p412298660298671Floydiella terrestris chloroplast
36NC_014346(AAAG)4p416347124347139Floydiella terrestris chloroplast
37NC_014346(AAAG)3p412369655369666Floydiella terrestris chloroplast
38NC_013843(AAAG)3p412116935116946 Vigna radiata chloroplast
39NC_013843(AAAG)3p412116935116946 Vigna radiata chloroplast
40NC_013707(AAAG)3p4127281672827 Olea europaea chloroplast
41NC_013707(AAAG)3p4127284172852 Olea europaea chloroplast
42NC_013088(AAAG)3p4121900919020 Dendrocalamus latiflorus chloroplast
43NC_012978(AAAG)3p4124614046151 Parachlorella kessleri chloroplast
44NC_012927(AAAG)3p4121882118832 Bambusa oldhamii chloroplast
45NC_012818(AAAG)3p412145006145017 Alsophila spinulosa chloroplast
46NC_011942(AAAG)3p4124967449685 Gnetum parvifolium chloroplast
47NC_011930(AAAG)3p4123104431055 Keteleeria davidiana chloroplast
48NC_011163(AAAG)3p4124713347144 Cicer arietinum chloroplast
49NC_011159(AAAG)3p412106847106858 Pinus nelsonii chloroplast
50NC_011158(AAAG)3p412106810106821 Pinus monophylla chloroplast
51NC_011156(AAAG)3p412107389107400 Pinus lambertiana chloroplast
52NC_011155(AAAG)3p412107192107203 Pinus krempfii chloroplast
53NC_011152(AAAG)3p412111445111456 Picea sitchensis chloroplast
54NC_011087(AAAG)3p412913954913965Paulinella chromatophora chromatophore
55NC_010772(AAAG)3p4126041160422 Heterosigma akashiwo chloroplast
56NC_010654(AAAG)3p412110150110161 Welwitschia mirabilis chloroplast
57NC_010548(AAAG)3p4124453444545 Cryptomeria japonica chloroplast
58NC_010442(AAAG)3p412150762150773 Trachelium caeruleum chloroplast
59NC_010362(AAAG)3p41288448855 Oenothera parviflora chloroplast
60NC_010361(AAAG)3p4126843468445 Oenothera biennis chloroplast
61NC_010361(AAAG)3p41290039014 Oenothera biennis chloroplast
62NC_010360(AAAG)3p4126892568936 Oenothera glazioviana chloroplast
63NC_010360(AAAG)3p41289458956 Oenothera glazioviana chloroplast
64NC_010358(AAAG)3p4126833868349 Oenothera argillicola chloroplast
65NC_009573(AAAG)3p412106513106524 Rhodomonas salina chloroplast
66NC_008456(AAAG)3p4124557445585 Drimys granadensis chloroplast
67NC_008454(AAAG)3p412132176132187 Pelargonium x hortorum chloroplast
68NC_008408(AAAG)3p4125215252163 Bigelowiella natans plastid
69NC_008372(AAAG)3p412204775204786 Stigeoclonium helveticum chloroplast
70NC_008359(AAAG)3p412134661134672 Morus indica chloroplast
71NC_008099(AAAG)3p4121240712418 Oltmannsiellopsis viridis chloroplast
72NC_006290(AAAG)3p4127221872229 Panax ginseng chloroplast
73NC_006084(AAAG)3p41261746185 Saccharum hybrid cultivar NCo 310 chloroplast
74NC_005878(AAAG)3p4126780067811 Saccharum hybrid cultivar SP-80-3280 chloroplast
75NC_005086(AAAG)3p412128888128899 Amborella trichopoda chloroplast
76NC_004799(AAAG)3p4124704747058 Cyanidioschyzon merolae strain 10D chloroplast
77NC_004677(AAAG)3p412107259107270 Pinus koraiensis chloroplast
78NC_002693(AAAG)3p4126891068921 Oenothera elata subsp. hookeri plastid plastome I
79NC_002693(AAAG)3p41290169027 Oenothera elata subsp. hookeri plastid plastome I
80NC_001631(AAAG)3p412110312110323 Pinus thunbergii chloroplast
81NC_000927(AAAG)3p4125039250403 Nephroselmis olivacea chloroplast