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ChloroMitoSSRDB 2.00 Webserver cum Database of Cholorplast and Mitochondrial Microsatellites

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Chloroplast Motifs - Perfect (TAT) Repeats

S.NoSequence IDSSRSSR TypeTract LengthStartEndSequence Name
1NC_022135(TAT)4p3124747647487Aegilops speltoides isolate SPE0661 chloroplast
2NC_022133(TAT)4p3124729047301Aegilops tauschii chloroplast
3NC_021762(TAT)4p3124737247383Triticum urartu chloroplast
4NC_021761(TAT)4p3124748847499Secale cereale chloroplast
5NC_021650(TAT)4p31248394850Glycine syndetika voucher CSIRO:G1300 chloroplast
6NC_021649(TAT)4p31248434854Glycine falcata voucher CSIRO:G1718 chloroplast
7NC_021649(TAT)4p3124819148202Glycine falcata voucher CSIRO:G1718 chloroplast
8NC_021648(TAT)4p31248374848Glycine dolichocarpa voucher CSIRO:G1134 chloroplast
9NC_021646(TAT)4p31248334844Glycine stenophita voucher CSIRO:G1974 chloroplast
10NC_021636(TAT)4p31248404851Glycine tomentella voucher CSIRO:G1403 chloroplast
11NC_021618(TAT)4p312139351139362Grateloupia taiwanensis plastid
12NC_021449(TAT)4p3123053630547Utricularia gibba chloroplast
13NC_021423(TAT)4p312100550100561Catharanthus roseus cultivar Pacifica Punch Halo chloroplast
14NC_021189(TAT)5p3152750527519Pyropia haitanensis voucher PH-38 chloroplast
15NC_021189(TAT)4p3127078470795Pyropia haitanensis voucher PH-38 chloroplast
16NC_021189(TAT)4p312158298158309Pyropia haitanensis voucher PH-38 chloroplast
17NC_021109(TAT)13p339268381268419Pleodorina starrii plastid
18NC_021091(TAT)4p312110236110247Vigna angularis chloroplast DNA
19NC_020795(TAT)4p3125051250523Chondrus crispus plastid complete genome
20NC_020367(TAT)5p3155268652700Dasypogon bromeliifolius plastid
21NC_020367(TAT)4p312122943122954Dasypogon bromeliifolius plastid
22NC_020341(TAT)4p312112057112068Arundinaria gigantea chloroplast
23NC_020319(TAT)4p312153560153571Cycas revoluta chloroplast
24NC_019602(TAT)4p3128638086391Fragaria virginiana chloroplast
25NC_019601(TAT)4p3128636186372Fragaria chiloensis chloroplast
26NC_018767(TAT)4p3128646186472Fragaria mandshurica plastid
27NC_018766(TAT)4p3128645786468Fragaria vesca subsp. bracteata chloroplast
28NC_018523(TAT)4p3128101081021Saccharina japonica chloroplast
29NC_018112(TAT)4p3127149571506Gossypium areysianum chloroplast
30NC_018110(TAT)4p3127146371474Gossypium somalense chloroplast
31NC_018109(TAT)4p3127124671257Gossypium incanum chloroplast
32NC_018051(TAT)4p312109834109845Vigna unguiculata chloroplast
33NC_017835(TAT)4p312108680108691Oryza rufipogon chloroplast
34NC_017609(TAT)4p312102068102079Phalaenopsis equestris chloroplast
35NC_016927(TAT)4p312108692108703Oryza meridionalis chloroplast
36NC_016921(TAT)4p3129536795378Pentactina rupicola chloroplast
37NC_016736(TAT)4p3121045110462Ricinus communis chloroplast
38NC_016736(TAT)4p3127517775188Ricinus communis chloroplast
39NC_016735(TAT)4p3128494184952Fucus vesiculosus chloroplast
40NC_016732(TAT)4p312107501107512Dunaliella salina chloroplast
41NC_016732(TAT)4p312199182199193Dunaliella salina chloroplast
42NC_016731(TAT)4p3122224122252Synedra acus chloroplast
43NC_016729(TAT)4p31245594570Silene conica chloroplast
44NC_016727(TAT)4p3122924029251Silene vulgaris chloroplast
45NC_016727(TAT)5p315111100111114Silene vulgaris chloroplast
46NC_016708(TAT)4p312119542119553Millettia pinnata chloroplast
47NC_016699(TAT)4p312112830112841Phyllostachys propinqua chloroplast
48NC_016064(TAT)4p3129440994420Pseudotsuga sinensis var. wilsoniana chloroplast
49NC_016058(TAT)4p3126242562436Larix decidua chloroplast
50NC_015899(TAT)4p3125352553536Wolffia australiana chloroplast
51NC_015894(TAT)4p31256415652Wolffiella lingulata chloroplast
52NC_015891(TAT)4p3125203552046Spirodela polyrhiza chloroplast
53NC_015831(TAT)4p312112545112556Ferrocalamus rimosivaginus plastid
54NC_015826(TAT)4p312112895112906Phyllostachys nigra var. henonis chloroplast
55NC_015820(TAT)4p312112822112833Acidosasa purpurea chloroplast
56NC_015817(TAT)4p312112806112817Phyllostachys edulis chloroplast
57NC_015803(TAT)4p312112801112812Indocalamus longiauritus plastid
58NC_015645(TAT)4p3129336893379Schizomeris leibleinii chloroplast
59NC_015543(TAT)4p3128258982600Jacobaea vulgaris chloroplast
60NC_015308(TAT)6p3185193051947Hevea brasiliensis chloroplast
61NC_015206(TAT)4p3128640086411Fragaria vesca subsp. vesca chloroplast
62NC_015113(TAT)4p3121556215573Anthriscus cerefolium chloroplast
63NC_014808(TAT)4p3128843188442Thalassiosira oceanica CCMP1005 chloroplast
64NC_014807(TAT)4p3123067630687Corynocarpus laevigata chloroplast
65NC_014675(TAT)14p3423967139712Isoetes flaccida chloroplast
66NC_014674(TAT)4p3127841578426Castanea mollissima chloroplast
67NC_014575(TAT)4p3124217242183Cedrus deodara chloroplast
68NC_014267(TAT)4p3125194451955Kryptoperidinium foliaceum chloroplast
69NC_014062(TAT)4p3121738417395 Anomochloa marantoidea chloroplast
70NC_014062(TAT)4p3121738417395 Anomochloa marantoidea chloroplast
71NC_014057(TAT)4p312118563118574 Pisum sativum chloroplast
72NC_014057(TAT)4p312118563118574 Pisum sativum chloroplast
73NC_013843(TAT)4p312109858109869 Vigna radiata chloroplast
74NC_013843(TAT)4p312109858109869 Vigna radiata chloroplast
75NC_013823(TAT)4p312123829123840 Typha latifolia chloroplast
76NC_013823(TAT)4p312123829123840 Typha latifolia chloroplast
77NC_013498(TAT)4p3126783267843 Ectocarpus siliculosus chloroplast
78NC_012898(TAT)4p3124773247743 Aureococcus anophagefferens chloroplast
79NC_012224(TAT)4p3125989059901 Jatropha curcas chloroplast
80NC_012224(TAT)4p3125357153582 Jatropha curcas chloroplast
81NC_012052(TAT)4p3126934469355 Syntrichia ruralis chloroplast
82NC_011930(TAT)4p3121368913700 Keteleeria davidiana chloroplast
83NC_011828(TAT)4p3129069190702 Trifolium subterraneum chloroplast
84NC_011828(TAT)4p3129046890479 Trifolium subterraneum chloroplast
85NC_011828(TAT)4p3128999290003 Trifolium subterraneum chloroplast
86NC_011828(TAT)4p3122496824979 Trifolium subterraneum chloroplast
87NC_011163(TAT)4p3124828148292 Cicer arietinum chloroplast
88NC_011152(TAT)4p3129336893379 Picea sitchensis chloroplast
89NC_011032(TAT)4p3127245372464 Brachypodium distachyon chloroplast
90NC_010776(TAT)4p31277427753 Fagopyrum esculentum subsp. ancestrale chloroplast
91NC_010433(TAT)4p3125131651327 Manihot esculenta chloroplast
92NC_010361(TAT)4p3125614156152 Oenothera biennis chloroplast
93NC_010360(TAT)4p3126215962170 Oenothera glazioviana chloroplast
94NC_010360(TAT)4p3125606456075 Oenothera glazioviana chloroplast
95NC_010323(TAT)5p3154945149465 Carica papaya chloroplast
96NC_009962(TAT)4p3126644066451 Ceratophyllum demersum chloroplast
97NC_009808(TAT)4p3128452984540 Ipomoea purpurea chloroplast
98NC_009600(TAT)4p3124673146742 Illicium oligandrum chloroplast
99NC_009598(TAT)4p3126640366414 Chloranthus spicatus chloroplast
100NC_009275(TAT)4p31280918102 Nasturtium officinale chloroplast
101NC_009272(TAT)4p3124553945550 Draba nemorosa chloroplast
102NC_009271(TAT)4p3124622246233 Crucihimalaya wallichii chloroplast
103NC_009267(TAT)5p3155029250306 Olimarabidopsis pumila chloroplast
104NC_009266(TAT)4p3124610346114 Aethionema grandiflorum chloroplast
105NC_008788(TAT)4p312115804115815 Nuphar advena chloroplast
106NC_008788(TAT)4p3125140551416 Nuphar advena chloroplast
107NC_008788(TAT)4p3123604036051 Nuphar advena chloroplast
108NC_008589(TAT)4p3124369243703 Thalassiosira pseudonana chloroplast
109NC_008372(TAT)4p3125567255683 Stigeoclonium helveticum chloroplast
110NC_008336(TAT)4p312117567117578 Nandina domestica chloroplast
111NC_008334(TAT)4p3128393983950 Citrus sinensis chloroplast
112NC_008325(TAT)4p3125106351074 Daucus carota chloroplast
113NC_008235(TAT)4p3122726127272 Populus alba chloroplast
114NC_008155(TAT)4p312108635108646 Oryza sativa Indica Group chloroplast
115NC_008097(TAT)4p31283488359 Chara vulgaris chloroplast
116NC_007932(TAT)4p3127083670847 Porphyra yezoensis chloroplast
117NC_007499(TAT)4p312101960101971 Phalaenopsis aphrodite subsp. formosana chloroplast
118NC_006861(TAT)10p3309916899197 Huperzia lucidula chloroplast
119NC_006050(TAT)4p312115067115078 Nymphaea alba chloroplast
120NC_006050(TAT)4p3126422264233 Nymphaea alba chloroplast
121NC_005973(TAT)4p312108629108640 Oryza nivara chloroplast
122NC_005087(TAT)4p3123258232593 Physcomitrella patens subsp. patens chloroplast
123NC_005087(TAT)4p3121621416225 Physcomitrella patens subsp. patens chloroplast
124NC_004823(TAT)4p3122750427515 Eimeria tenella strain Penn State apicoplast
125NC_002762(TAT)4p3124773047741 Triticum aestivum chloroplast
126NC_002694(TAT)4p3127838478395 Lotus japonicus chloroplast
127NC_002693(TAT)4p3125629356304 Oenothera elata subsp. hookeri plastid plastome I
128NC_001799(TAT)4p3122964429655 Toxoplasma gondii RH apicoplast
129NC_001666(TAT)5p3152059620610 Zea mays chloroplast
130NC_001603(TAT)5p3155994559959 Euglena gracilis chloroplast
131NC_001603(TAT)4p3121333013341 Euglena gracilis chloroplast
132NC_001320(TAT)4p312108670108681 Oryza sativa Japonica Group plastid
133NC_000932(TAT)5p315119156119170 Arabidopsis thaliana chloroplast
134NC_000925(TAT)5p3152745527469 Porphyra purpurea chloroplast
135NC_000925(TAT)4p3127067070681 Porphyra purpurea chloroplast