Team
Contact

ChloroMitoSSRDB 2.00 Webserver cum Database of Cholorplast and Mitochondrial Microsatellites

Back To Motif Summary

Chloroplast Motifs - Perfect (ATT) Repeats

S.NoSequence IDSSRSSR TypeTract LengthStartEndSequence Name
1NC_022100(ATT)4p3128034380354Medicago truncatula cultivar Borung plastid
2NC_022099(ATT)4p3128054380554Medicago truncatula cultivar Jemalong 2HA plastid
3NC_021433(ATT)5p3154449444508Cymbidium mannii voucher KUN:YJB100602 chloroplast
4NC_021432(ATT)4p3124418844199Cymbidium tracyanum voucher KUN:YJB100606 chloroplast
5NC_021431(ATT)4p3124475844769Cymbidium tortisepalum voucher KUN:HJL091027 chloroplast
6NC_021430(ATT)4p3124466044671Cymbidium sinense voucher KUN:YJB100605 chloroplast
7NC_021429(ATT)4p3124461144622Cymbidium aloifolium voucher KUN:YJB100604 chloroplast
8NC_021189(ATT)4p312121705121716Pyropia haitanensis voucher PH-38 chloroplast
9NC_020795(ATT)4p3121563415645Chondrus crispus plastid complete genome
10NC_020795(ATT)4p3127400674017Chondrus crispus plastid complete genome
11NC_020607(ATT)4p3126081260823Artemisia frigida chloroplast
12NC_020438(ATT)4p312128778128789Gonium pectorale chloroplast
13NC_020364(ATT)5p315128350128364Pseudophoenix vinifera plastid
14NC_020362(ATT)4p3122375423765Heliconia collinsiana plastid
15NC_020320(ATT)4p3126084060851Chrysanthemum indicum voucher HeN001 chloroplast
16NC_020152(ATT)4p312135019135030Quercus rubra plastid
17NC_020092(ATT)4p3126081560826Chrysanthemum x morifolium chloroplast
18NC_018541(ATT)4p3125303153042Elodea canadensis chloroplast
19NC_018541(ATT)4p312116600116611Elodea canadensis chloroplast
20NC_018523(ATT)4p3121742517436Saccharina japonica chloroplast
21NC_018523(ATT)4p312127116127127Saccharina japonica chloroplast
22NC_017928(ATT)4p31241864197Plasmodium falciparum HB3 apicoplast
23NC_017754(ATT)4p3123064830659Eutreptiella gymnastica plastid
24NC_016735(ATT)4p3122270522716Fucus vesiculosus chloroplast
25NC_016735(ATT)4p3125111951130Fucus vesiculosus chloroplast
26NC_016735(ATT)4p3129962399634Fucus vesiculosus chloroplast
27NC_016734(ATT)4p3124570245713Brassica napus chloroplast
28NC_016732(ATT)4p3123863038641Dunaliella salina chloroplast
29NC_016732(ATT)4p312266361266372Dunaliella salina chloroplast
30NC_016728(ATT)4p3125940759418Silene noctiflora chloroplast
31NC_016727(ATT)4p31279247935Silene vulgaris chloroplast
32NC_016708(ATT)4p3127532675337Millettia pinnata chloroplast
33NC_016708(ATT)4p312112422112433Millettia pinnata chloroplast
34NC_016471(ATT)4p3121235312364Neottia nidus-avis plastid
35NC_015891(ATT)4p312123916123927Spirodela polyrhiza chloroplast
36NC_015831(ATT)4p3125302153032Ferrocalamus rimosivaginus plastid
37NC_015645(ATT)6p3185589655913Schizomeris leibleinii chloroplast
38NC_015645(ATT)4p312103407103418Schizomeris leibleinii chloroplast
39NC_015610(ATT)4p3123648936500Nelumbo nucifera chloroplast
40NC_015605(ATT)4p3123652136532Nelumbo lutea chloroplast
41NC_015543(ATT)4p3124556145572Jacobaea vulgaris chloroplast
42NC_015402(ATT)4p3126377763788Ptilidium pulcherrimum chloroplast
43NC_015139(ATT)4p3124575945770Brassica rapa subsp. pekinensis chloroplast
44NC_015113(ATT)4p312113486113497Anthriscus cerefolium chloroplast
45NC_015083(ATT)4p312113059113070Erodium carvifolium chloroplast
46NC_014808(ATT)4p312122998123009Thalassiosira oceanica CCMP1005 chloroplast
47NC_014676(ATT)4p3123829138302Theobroma cacao chloroplast
48NC_014674(ATT)4p312134706134717Castanea mollissima chloroplast
49NC_014062(ATT)5p3156523865252 Anomochloa marantoidea chloroplast
50NC_014062(ATT)5p3156523865252 Anomochloa marantoidea chloroplast
51NC_014057(ATT)4p31243644375 Pisum sativum chloroplast
52NC_014057(ATT)4p31243644375 Pisum sativum chloroplast
53NC_012575(ATT)4p3127021770228 Micromonas sp. RCC299 chloroplast
54NC_012052(ATT)5p315104282104296 Syntrichia ruralis chloroplast
55NC_011828(ATT)4p3121502015031 Trifolium subterraneum chloroplast
56NC_011828(ATT)4p31218211832 Trifolium subterraneum chloroplast
57NC_011600(ATT)5p315100873100887 Vaucheria litorea chloroplast
58NC_011600(ATT)5p3156884068854 Vaucheria litorea chloroplast
59NC_011600(ATT)4p3123346233473 Vaucheria litorea chloroplast
60NC_011087(ATT)4p312332756332767Paulinella chromatophora chromatophore
61NC_011087(ATT)4p312919459919470Paulinella chromatophora chromatophore
62NC_011087(ATT)4p312929709929720Paulinella chromatophora chromatophore
63NC_011031(ATT)5p315145198145212 Oedogonium cardiacum chloroplast
64NC_010654(ATT)4p3125411354124 Welwitschia mirabilis chloroplast
65NC_010359(ATT)4p3122512125132 Aneura mirabilis chloroplast
66NC_010323(ATT)4p3123470634717 Carica papaya chloroplast
67NC_010093(ATT)4p3121359913610 Acorus americanus chloroplast
68NC_009765(ATT)4p3124183541846 Cuscuta gronovii chloroplast
69NC_009681(ATT)4p312116226116237 Leptosira terrestris chloroplast
70NC_009681(ATT)4p3126271662727 Leptosira terrestris chloroplast
71NC_009268(ATT)4p3121380413815 Arabis hirsuta chloroplast
72NC_009266(ATT)4p3127989479905 Aethionema grandiflorum chloroplast
73NC_009265(ATT)5p3157982379837 Aethionema cordifolium chloroplast
74NC_008788(ATT)4p3123516935180 Nuphar advena chloroplast
75NC_008589(ATT)4p3127764777658 Thalassiosira pseudonana chloroplast
76NC_008588(ATT)4p3127590475915 Phaeodactylum tricornutum chloroplast
77NC_008408(ATT)4p3122830428315 Bigelowiella natans plastid
78NC_008372(ATT)5p3153484934863 Stigeoclonium helveticum chloroplast
79NC_008336(ATT)4p3123231332324 Nandina domestica chloroplast
80NC_008334(ATT)6p31817431760 Citrus sinensis chloroplast
81NC_008334(ATT)4p3125479154802 Citrus sinensis chloroplast
82NC_008334(ATT)4p3125451354524 Citrus sinensis chloroplast
83NC_008334(ATT)4p3121078510796 Citrus sinensis chloroplast
84NC_008114(ATT)4p3129034390354 Pseudendoclonium akinetum chloroplast
85NC_008097(ATT)4p312166134166145 Chara vulgaris chloroplast
86NC_008097(ATT)4p312123143123154 Chara vulgaris chloroplast
87NC_008097(ATT)4p3123840238413 Chara vulgaris chloroplast
88NC_007942(ATT)5p3152863028644 Glycine max chloroplast
89NC_007942(ATT)4p3121461314624 Glycine max chloroplast
90NC_007932(ATT)4p312120795120806 Porphyra yezoensis chloroplast
91NC_007578(ATT)4p31298449855 Lactuca sativa chloroplast
92NC_007407(ATT)4p3121392313934 Acorus calamus plastid
93NC_007288(ATT)4p3126995169962 Emiliania huxleyi chloroplast
94NC_006137(ATT)5p3159953899552 Gracilaria tenuistipitata var. liui chloroplast
95NC_006137(ATT)4p312150754150765 Gracilaria tenuistipitata var. liui chloroplast
96NC_005087(ATT)4p312109694109705 Physcomitrella patens subsp. patens chloroplast
97NC_004823(ATT)4p3122396323974 Eimeria tenella strain Penn State apicoplast
98NC_004543(ATT)4p3128373883749 Anthoceros formosae chloroplast
99NC_003119(ATT)4p3128054380554 Medicago truncatula chloroplast
100NC_002186(ATT)5p3159684596859 Mesostigma viride chloroplast
101NC_001713(ATT)4p3123605536066 Odontella sinensis chloroplast
102NC_001675(ATT)4p312102524102535 Cyanophora paradoxa cyanelle
103NC_001675(ATT)4p3128751487525 Cyanophora paradoxa cyanelle
104NC_001675(ATT)4p3128662886639 Cyanophora paradoxa cyanelle
105NC_001603(ATT)4p3128184681857 Euglena gracilis chloroplast
106NC_001603(ATT)4p3124377043781 Euglena gracilis chloroplast
107NC_001603(ATT)4p3123061130622 Euglena gracilis chloroplast
108NC_001603(ATT)4p3121563715648 Euglena gracilis chloroplast
109NC_000925(ATT)4p312143685143696 Porphyra purpurea chloroplast