Team
Contact

ChloroMitoSSRDB 2.00 Webserver cum Database of Cholorplast and Mitochondrial Microsatellites

Back To Motif Summary

Chloroplast Motifs - Perfect (ATA) Repeats

S.NoSequence IDSSRSSR TypeTract LengthStartEndSequence Name
1NC_022136(ATA)4p3123673936750Lygodium japonicum chloroplast
2NC_021761(ATA)4p3125646856479Secale cereale chloroplast
3NC_021646(ATA)4p3125925959270Glycine stenophita voucher CSIRO:G1974 chloroplast
4NC_021618(ATA)4p3128660186612Grateloupia taiwanensis plastid
5NC_021432(ATA)4p31234273438Cymbidium tracyanum voucher KUN:YJB100606 chloroplast
6NC_021432(ATA)4p312121810121821Cymbidium tracyanum voucher KUN:YJB100606 chloroplast
7NC_021431(ATA)4p31234923503Cymbidium tortisepalum voucher KUN:HJL091027 chloroplast
8NC_021430(ATA)4p31234563467Cymbidium sinense voucher KUN:YJB100605 chloroplast
9NC_021429(ATA)4p31234543465Cymbidium aloifolium voucher KUN:YJB100604 chloroplast
10NC_021426(ATA)4p3125955359564Trochodendron aralioides chloroplast
11NC_021425(ATA)4p3122895528966Tetracentron sinense chloroplast
12NC_021425(ATA)4p3125837558386Tetracentron sinense chloroplast
13NC_021423(ATA)4p3127374073751Catharanthus roseus cultivar Pacifica Punch Halo chloroplast
14NC_021189(ATA)4p3123696936980Pyropia haitanensis voucher PH-38 chloroplast
15NC_021189(ATA)4p3126186261873Pyropia haitanensis voucher PH-38 chloroplast
16NC_021109(ATA)5p315103118103132Pleodorina starrii plastid
17NC_021101(ATA)4p312125994126005Francoa sonchifolia plastid
18NC_020795(ATA)4p312154817154828Chondrus crispus plastid complete genome
19NC_020607(ATA)4p31256455656Artemisia frigida chloroplast
20NC_020438(ATA)18p354155942155995Gonium pectorale chloroplast
21NC_020367(ATA)4p3123098630997Dasypogon bromeliifolius plastid
22NC_020361(ATA)4p312119901119912Podocarpus totara chloroplast
23NC_020320(ATA)4p31256385649Chrysanthemum indicum voucher HeN001 chloroplast
24NC_020318(ATA)4p3125754657557Magnolia grandiflora voucher NJ016 chloroplast
25NC_020317(ATA)4p3125796957980Magnolia officinalis subsp. biloba voucher SC001 chloroplast
26NC_020316(ATA)4p3125796157972Magnolia officinalis chloroplast
27NC_020152(ATA)4p3128803488045Quercus rubra plastid
28NC_020092(ATA)4p31256495660Chrysanthemum x morifolium chloroplast
29NC_019602(ATA)4p312154817154828Fragaria virginiana chloroplast
30NC_019601(ATA)4p312154799154810Fragaria chiloensis chloroplast
31NC_018523(ATA)4p3124368843699Saccharina japonica chloroplast
32NC_018523(ATA)5p315117553117567Saccharina japonica chloroplast
33NC_018357(ATA)4p3125788057891Magnolia denudata chloroplast
34NC_018112(ATA)4p3128789587906Gossypium areysianum chloroplast
35NC_018110(ATA)4p3128786387874Gossypium somalense chloroplast
36NC_018051(ATA)4p312151982151993Vigna unguiculata chloroplast
37NC_017928(ATA)4p31276257636Plasmodium falciparum HB3 apicoplast
38NC_017928(ATA)4p3121220812219Plasmodium falciparum HB3 apicoplast
39NC_017609(ATA)4p312132848132859Phalaenopsis equestris chloroplast
40NC_017602(ATA)6p318127688127705Elaeis guineensis chloroplast
41NC_016921(ATA)4p312146205146216Pentactina rupicola chloroplast
42NC_016753(ATA)4p3126155461565Colocasia esculenta chloroplast
43NC_016730(ATA)4p312115990116001Silene latifolia chloroplast
44NC_016729(ATA)4p3125376553776Silene conica chloroplast
45NC_016728(ATA)4p312116805116816Silene noctiflora chloroplast
46NC_016727(ATA)7p32173777397Silene vulgaris chloroplast
47NC_016712(ATA)4p3123822938240Gossypium arboreum chloroplast
48NC_016711(ATA)4p3123827538286Gossypium mustelinum chloroplast
49NC_016711(ATA)4p3124849948510Gossypium mustelinum chloroplast
50NC_016692(ATA)4p3123825638267Gossypium herbaceum subsp. africanum chloroplast
51NC_016690(ATA)4p3123831138322Gossypium tomentosum chloroplast
52NC_016690(ATA)4p3124855448565Gossypium tomentosum chloroplast
53NC_016670(ATA)4p3123834838359Gossypium darwinii chloroplast
54NC_016670(ATA)4p3124854248553Gossypium darwinii chloroplast
55NC_016468(ATA)4p3124270042711Boea hygrometrica chloroplast
56NC_016063(ATA)6p318111965111982Cephalotaxus wilsoniana chloroplast DNA
57NC_015983(ATA)4p31273747385Cucumis melo subsp. melo chloroplast
58NC_015892(ATA)4p3125778557796Magnolia kwangsiensis chloroplast
59NC_015605(ATA)4p3123460734618Nelumbo lutea chloroplast
60NC_015605(ATA)5p3153475034764Nelumbo lutea chloroplast
61NC_015403(ATA)4p3129932599336Fistulifera sp. JPCC DA0580 chloroplast
62NC_015402(ATA)4p3124790447915Ptilidium pulcherrimum chloroplast
63NC_015206(ATA)4p312154887154898Fragaria vesca subsp. vesca chloroplast
64NC_015204(ATA)4p3123826738278Gossypium thurberi chloroplast
65NC_014807(ATA)4p3125084950860Corynocarpus laevigata chloroplast
66NC_014675(ATA)9p32755745600Isoetes flaccida chloroplast
67NC_014674(ATA)4p3128796287973Castanea mollissima chloroplast
68NC_014573(ATA)4p312103995104006Geranium palmatum plastid
69NC_013553(ATA)4p3127581175822 Parthenium argentatum chloroplast
70NC_013553(ATA)4p3123593535946 Parthenium argentatum chloroplast
71NC_013359(ATA)4p3129797697987 Bryopsis hypnoides chloroplast
72NC_013086(ATA)5p315108797108811 Selaginella moellendorffii plastid
73NC_012224(ATA)4p312127961127972 Jatropha curcas chloroplast
74NC_012052(ATA)5p3157950579519 Syntrichia ruralis chloroplast
75NC_012052(ATA)4p312101589101600 Syntrichia ruralis chloroplast
76NC_012052(ATA)4p3124489444905 Syntrichia ruralis chloroplast
77NC_012052(ATA)4p3121635516366 Syntrichia ruralis chloroplast
78NC_011954(ATA)5p3156520665220 Ephedra equisetina chloroplast
79NC_011828(ATA)5p3152564525659 Trifolium subterraneum chloroplast
80NC_011600(ATA)4p3124082040831 Vaucheria litorea chloroplast
81NC_011163(ATA)7p3214461944639 Cicer arietinum chloroplast
82NC_011163(ATA)4p3122479024801 Cicer arietinum chloroplast
83NC_010548(ATA)4p3128691086921 Cryptomeria japonica chloroplast
84NC_010433(ATA)4p3123896038971 Manihot esculenta chloroplast
85NC_010323(ATA)4p3125793357944 Carica papaya chloroplast
86NC_009808(ATA)4p3127424474255 Ipomoea purpurea chloroplast
87NC_009766(ATA)4p3127584775858 Cuscuta reflexa chloroplast
88NC_009681(ATA)4p312137530137541 Leptosira terrestris chloroplast
89NC_009618(ATA)4p312123685123696 Cycas taitungensis chloroplast
90NC_009599(ATA)4p3125785657867 Buxus microphylla chloroplast
91NC_009599(ATA)4p3124958949600 Buxus microphylla chloroplast
92NC_009598(ATA)5p3153024830262 Chloranthus spicatus chloroplast
93NC_009573(ATA)4p3121795617967 Rhodomonas salina chloroplast
94NC_009275(ATA)4p3123598635997 Nasturtium officinale chloroplast
95NC_009273(ATA)4p312113961113972 Lepidium virginicum chloroplast
96NC_009273(ATA)4p3123594835959 Lepidium virginicum chloroplast
97NC_009265(ATA)4p312112468112479 Aethionema cordifolium chloroplast
98NC_008788(ATA)4p312135431135442 Nuphar advena chloroplast
99NC_008788(ATA)4p312124249124260 Nuphar advena chloroplast
100NC_008641(ATA)4p3124851848529 Gossypium barbadense chloroplast
101NC_008641(ATA)4p3123831338324 Gossypium barbadense chloroplast
102NC_008457(ATA)5p3156975369767 Piper cenocladum chloroplast
103NC_008457(ATA)4p3127000370014 Piper cenocladum chloroplast
104NC_008456(ATA)5p3155848658500 Drimys granadensis chloroplast
105NC_008372(ATA)5p3152345323467 Stigeoclonium helveticum chloroplast
106NC_008372(ATA)4p3125434554356 Stigeoclonium helveticum chloroplast
107NC_008334(ATA)4p3127089170902 Citrus sinensis chloroplast
108NC_008326(ATA)6p3185791457931 Liriodendron tulipifera chloroplast
109NC_008097(ATA)5p315149436149450 Chara vulgaris chloroplast
110NC_008097(ATA)5p3152261322627 Chara vulgaris chloroplast
111NC_008097(ATA)4p312124066124077 Chara vulgaris chloroplast
112NC_008097(ATA)4p312103293103304 Chara vulgaris chloroplast
113NC_008097(ATA)4p3125982059831 Chara vulgaris chloroplast
114NC_008097(ATA)4p3122066020671 Chara vulgaris chloroplast
115NC_007957(ATA)5p3155865558669 Vitis vinifera chloroplast
116NC_007957(ATA)4p312129778129789 Vitis vinifera chloroplast
117NC_007957(ATA)4p31266816692 Vitis vinifera chloroplast
118NC_007944(ATA)4p3124846248473 Gossypium hirsutum chloroplast
119NC_007932(ATA)4p3126189161902 Porphyra yezoensis chloroplast
120NC_007932(ATA)4p3121884218853 Porphyra yezoensis chloroplast
121NC_007758(ATA)4p31270467057 Theileria parva strain Muguga apicoplast
122NC_007499(ATA)4p312132951132962 Phalaenopsis aphrodite subsp. formosana chloroplast
123NC_006290(ATA)4p3125657156582 Panax ginseng chloroplast
124NC_006050(ATA)4p312134867134878 Nymphaea alba chloroplast
125NC_005353(ATA)5p3157536075374 Chlamydomonas reinhardtii chloroplast
126NC_005353(ATA)5p315835849 Chlamydomonas reinhardtii chloroplast
127NC_005353(ATA)15p3453590635950 Chlamydomonas reinhardtii chloroplast
128NC_005087(ATA)5p3151548615500 Physcomitrella patens subsp. patens chloroplast
129NC_005086(ATA)4p3126527265283 Amborella trichopoda chloroplast
130NC_004993(ATA)4p312119129119140 Calycanthus floridus var. glaucus chloroplast
131NC_004823(ATA)4p31258465857 Eimeria tenella strain Penn State apicoplast
132NC_001840(ATA)5p3158042580439 Cyanidium caldarium chloroplast
133NC_001840(ATA)4p3126046860479 Cyanidium caldarium chloroplast
134NC_001713(ATA)4p312116739116750 Odontella sinensis chloroplast
135NC_001603(ATA)4p3126091060921 Euglena gracilis chloroplast
136NC_001568(ATA)5p31514721486 Epifagus virginiana chloroplast