All Repeats of Cyberlindnera jadinii strain CBS 1600 mitochondrion
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | SSR | SSR Type | Start | End | Tract Length | Primer Design |
|---|---|---|---|---|---|---|---|
| 1 | NC_022163 | (ATTT)4 | p4 | 6 | 21 | 16 | Design Primer |
| 2 | NC_022163 | (TA)6ttataca(TAT)5ttattatttattattattgattattat(TTA)4 | c | 750 | 822 | 73 | Design Primer |
| 3 | NC_022163 | (TTA)5ttgattatttactattataaataatactatatattat(TA)7ttac(TAT)5tagtaataac(TA)7ctattat(TA)9ttat(TA)6ttactataattattatactac(TATTA)3(TAT)7*aata(TAT)6attattatactactatta(TAT)5aataata(TAT)6 | c* | 956 | 1237 | 282 | Design Primer |
| 4 | NC_022163 | (TA)7ttatatattattactattataaatattattatatatttattattatactatactattatattattatatattattatatattat(TA)9ttatttatattataattactatatacatg(TAT)5ttattatatattatagtat(TTA)8 | c | 1345 | 1547 | 203 | Design Primer |
| 5 | NC_022163 | (ATT)4 | p3 | 1710 | 1721 | 12 | Design Primer |
| 6 | NC_022163 | (TAT)4aatattatataga(TAT)6aatat(TA)6 | c | 2359 | 2418 | 60 | Design Primer |
| 7 | NC_022163 | (ATA)4 | p3 | 3524 | 3535 | 12 | Design Primer |
| 8 | NC_022163 | (AAT)4atata(TAT)4attataaagggtaaaaactgagaatcgaactcagacatactgcgccacaagcagttattctacctttgaattatatttaccttaaatg(ATTA)5 | c | 3699 | 3835 | 137 | Design Primer |
| 9 | NC_022163 | (AT)11 | p2 | 4265 | 4286 | 22 | Design Primer |
| 10 | NC_022163 | (TTA)4 | p3 | 5688 | 5699 | 12 | Design Primer |
| 11 | NC_022163 | (AATA)3a(ATTT)4 | c | 5806 | 5834 | 29 | Design Primer |
| 12 | NC_022163 | (TAT)4aataattttagaactacaaagaattgaactttgatccatccattatgagtggactgctttaccattaagctataattctta(AT)11aaataaatataa(AT)7taatataaatt(ATTA)4 | c | 5944 | 6111 | 168 | Design Primer |
| 13 | NC_022163 | (ATAA)3 | p4 | 6213 | 6224 | 12 | Design Primer |
| 14 | NC_022163 | (ATT)9gatgaatatgaaaattatataaatatatat(TA)6 | c | 8250 | 8318 | 69 | Design Primer |
| 15 | NC_022163 | (AAG)4 | p3 | 8505 | 8516 | 12 | Design Primer |
| 16 | NC_022163 | (TA)10tcttacttaattataaaaatggactatatcttaaaaaattaaattttta(TTAT)4 | c | 8759 | 8843 | 85 | Design Primer |
| 17 | NC_022163 | (AT)6 | p2 | 11199 | 11210 | 12 | Design Primer |
| 18 | NC_022163 | (TA)6 | p2 | 11891 | 11902 | 12 | Design Primer |
| 19 | NC_022163 | (TA)6 | p2 | 12834 | 12845 | 12 | Design Primer |
| 20 | NC_022163 | (ATT)4 | p3 | 14583 | 14594 | 12 | Design Primer |
| 21 | NC_022163 | (AT)6aaatatatagacatatattaatatttcgtaaaacatttccatgatgttttaccattaaacaatactctctaatata(AT)7 | c | 14810 | 14911 | 102 | Design Primer |
| 22 | NC_022163 | (AT)9 | p2 | 15172 | 15189 | 18 | Design Primer |
| 23 | NC_022163 | (TA)6 | p2 | 15294 | 15305 | 12 | Design Primer |
| 24 | NC_022163 | (AT)8 | p2 | 15493 | 15508 | 16 | Design Primer |
| 25 | NC_022163 | (AT)8tacttatatttaaatatattaataataatataattatttgt(ATAA)3 | c | 15715 | 15783 | 69 | Design Primer |
| 26 | NC_022163 | (ATA)4 | p3 | 16127 | 16138 | 12 | Design Primer |
| 27 | NC_022163 | (AACT)3 | p4 | 17032 | 17043 | 12 | Design Primer |
| 28 | NC_022163 | (ATA)4tatagtatattatatatatttattatatatataatatatatatactatat(TA)7 | c | 17150 | 17225 | 76 | Design Primer |
| 29 | NC_022163 | (AT)7 | p2 | 17676 | 17689 | 14 | Design Primer |
| 30 | NC_022163 | (TA)9ttgagaaat(ATA)4 | c | 17801 | 17839 | 39 | Design Primer |
| 31 | NC_022163 | (ATA)5taatattatattatatatattattttttaatgaatatgaataataataaaaaaatta(T)10 | c | 20154 | 20235 | 82 | Design Primer |
| 32 | NC_022163 | (TAAT)3a(TAAT)4 | c | 21455 | 21483 | 29 | Design Primer |
| 33 | NC_022163 | (TA)8ataattaatatttaagaaatatattaattatatataaataattattcataattataatcataattata(ATT)6 | c | 22604 | 22705 | 102 | Design Primer |
| 34 | NC_022163 | (TATT)4ttcattgttttattaataattat(TAA)5 | c | 23363 | 23416 | 54 | Design Primer |
| 35 | NC_022163 | (AT)9tataattattattataataattat(TAA)4tatatattaacttatatataaataataaattgaaatgaatatg(AATA)3 | c | 23890 | 23998 | 109 | Design Primer |
| 36 | NC_022163 | (AATA)3 | p4 | 24860 | 24871 | 12 | Design Primer |
| 37 | NC_022163 | (TA)7atcttatagtaaattatact(ATA)4aatattgtaattattttatattactta(TATAT)3atatattatgttatataatattatttgtaatgaatatgaaaaatgataaattataataagaattataattatgattgtacagcaggtgtat(TGAA)3 | c | 25139 | 25329 | 191 | Design Primer |
| 38 | NC_022163 | (TA)6 | p2 | 25783 | 25794 | 12 | Design Primer |
| 39 | NC_022163 | (ATTT)3 | p4 | 27522 | 27533 | 12 | Design Primer |
| 40 | NC_022163 | (TTAA)5 | p4 | 29567 | 29586 | 20 | Design Primer |
| 41 | NC_022163 | (ATA)4ttatttatattattaattaaataaatatattaaattaaaattaatataatatactaaattaatttaaaaaatgattataaattata(AT)8tatgatgtattaaataattaaactttattaaataagttcactctcatatgttgaaatata(AT)8 | c | 29992 | 30181 | 190 | Design Primer |
| 42 | NC_022163 | (AT)8 | p2 | 30401 | 30416 | 16 | Design Primer |
| 43 | NC_022163 | (ATAA)3 | p4 | 31189 | 31200 | 12 | Design Primer |
| 44 | NC_022163 | (ATTA)4 | p4 | 32238 | 32253 | 16 | Design Primer |
| 45 | NC_022163 | (T)11 | p1 | 33197 | 33207 | 11 | Design Primer |
| 46 | NC_022163 | (ATTT)3 | p4 | 33339 | 33350 | 12 | Design Primer |
| 47 | NC_022163 | (TAT)4 | p3 | 33860 | 33871 | 12 | Design Primer |
| 48 | NC_022163 | (TTATTT)3 | p6 | 36433 | 36450 | 18 | Design Primer |
| 49 | NC_022163 | (TA)6 | p2 | 37795 | 37806 | 12 | Design Primer |
| 50 | NC_022163 | (ATT)4ttaat(TA)6(AT)6 | c | 38341 | 38381 | 41 | Design Primer |
| 51 | NC_022163 | (ATA)4 | p3 | 40232 | 40243 | 12 | Design Primer |
| 52 | NC_022163 | (AAT)8aaatactataatatataata(AAT)5acatgtatatagtaattataatataaata(AT)9aataatatataataatatataataatataatagtatagtataataataaatatataataatatttataatagtaataatatata(AT)7 | c | 40406 | 40609 | 204 | Design Primer |
| 53 | NC_022163 | (ATA)6tattatt(ATA)5taatagtagtataataat(ATA)6tatt(ATA)7(ATAAT)3*agtagtataataattatagta(AT)6aata(AT)9aataatag(TA)7gttattac(TAA)5tagta(AT)7aataatatatagtattatttataatagtaaataatc(AAT)5 | c* | 40718 | 40997 | 280 | Design Primer |
| 54 | NC_022163 | (AAT)4aaataataatcaataataataaataata(AAT)5atgtata(AT)6 | c | 41131 | 41204 | 74 | Design Primer |