Compound Compound Repeats of Medicago truncatula cultivar Borung plastid
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| S.No. | Genome ID | SSR | SSR Type | Start | End | Tract Length | Primer Design |
|---|---|---|---|---|---|---|---|
| 1 | NC_022100 | (ATTA)4taagtaatataaataactatgtttgtcatt(TA)6 | c | 2668 | 2725 | 58 | Design Primer |
| 2 | NC_022100 | (A)10gacaaagaaatcgaaatttcatgaccgtattgatatgaccaggaaaaaaaaatttatatacttaaa(T)10 | c | 8242 | 8327 | 86 | Design Primer |
| 3 | NC_022100 | (A)10taagaccatcgcatttctttttttatttaaatttatttatataaaaatataaataa(AT)6aaatttatatt(TA)6 | c | 13233 | 13333 | 101 | Design Primer |
| 4 | NC_022100 | (AAT)4agatg(A)12gaaaaaggaatgaaatctatatatatattgaatatatatatagatagattcaaaatacaaattcgaattcagaattctatttgtattttgtataaagtat(A)10tacaaatagaattctgaattcgatataatattatctatatagtttataatttataatagg(TCAT)3 | c | 45361 | 45571 | 211 | Design Primer |
| 5 | NC_022100 | (T)10gaataatgcatatttgtagcaatgaaatactattctcctccccaaaatgattaattacaaatatctatgattgatttgattaatttatgtttttttttc(T)10 | c | 50032 | 50150 | 119 | Design Primer |
| 6 | NC_022100 | (A)14taaatataaatctgcattgaatttgagtttcgattcaaaatgaaatttacttgaagagtaactc(TATT)3ttttttcgattttttagaacagtagtaggagttctagcgatcgactcgcttttttcata(T)11cata(T)11cata(T)10 | c | 58265 | 58453 | 189 | Design Primer |
| 7 | NC_022100 | (A)10ggatttgttttatttatattctta(T)10 | c | 58759 | 58802 | 44 | Design Primer |
| 8 | NC_022100 | (T)12cgaacttattctagtctaattag(A)14 | c | 59525 | 59573 | 49 | Design Primer |
| 9 | NC_022100 | (T)10gaaattacttcattttttataaacttagtatcaaaggaaacataatatgaaatagaagagaatctattctctttctctggcg(T)10 | c | 70422 | 70523 | 102 | Design Primer |
| 10 | NC_022100 | (T)10ctatttattatctataaataaatagaaataaagagagaattattgatttcattttttataccttcagc(A)10 | c | 71033 | 71120 | 88 | Design Primer |
| 11 | NC_022100 | (AATTTG)3attctttttcgaagg(A)11 | c | 74108 | 74151 | 44 | Design Primer |
| 12 | NC_022100 | (T)10accgttccgggtggtatcaagatagaactgtgtcgggatatcttatccctctctccgggaaaatggatatttccagaaaataattttaattcga(T)13 | c | 81018 | 81134 | 117 | Design Primer |
| 13 | NC_022100 | (A)10gagatgaaataattaattccacaaaaaaataa(T)11 | c | 85589 | 85641 | 53 | Design Primer |
| 14 | NC_022100 | (TTA)4tatatattaatattattatatattaatattattatattaataataaaatccaattcaaaaagaatcca(T)11 | c | 91144 | 91234 | 91 | Design Primer |
| 15 | NC_022100 | (ATACA)3atatatc(A)12 | c | 99402 | 99435 | 34 | Design Primer |
| 16 | NC_022100 | (T)10caaaatttttttctttctctagactgagatcggt(A)13 | c | 107460 | 107516 | 57 | Design Primer |
| 17 | NC_022100 | (AAT)4tttaagataagaattttaattaagag(TTAA)3 | c | 109395 | 109444 | 50 | Design Primer |
| 18 | NC_022100 | (T)10caagtccagaaacctcagtatccgaagtggtaggagttagtctcatattaaaatagatccg(T)10g(A)15 | c | 116607 | 116703 | 97 | Design Primer |
| 19 | NC_022100 | (GAAT)3taaatagaaataagttagatt(A)12ttagaatagaaatatttttatatttgttttctctattgta(T)14 | c | 119082 | 119180 | 99 | Design Primer |
| 20 | NC_022100 | (A)12tttcaaatttttaatttatacgtttctctcatcaatctttttgatctttttgtaatacatatgacttcacaatgtaaaattaag(A)10 | c | 123531 | 123636 | 106 | Design Primer |