All Repeats of Trochodendron aralioides chloroplast
Click on Table Heading To Sort Results Accordingly
S.No. | Genome ID | SSR | SSR Type | Start | End | Tract Length | Primer Design |
---|---|---|---|---|---|---|---|
1 | NC_021426 | (A)17 | p1 | 214 | 230 | 17 | Design Primer |
2 | NC_021426 | (TGAA)3 | p4 | 1771 | 1782 | 12 | Design Primer |
3 | NC_021426 | (AATAA)3ataataa(AT)6aawaawaata(AT)6aawaawaataaatatat(TAA)4(AT)6aa(AT)6aatawt(TAA)6(AAT)4(AT)6*aataataawaaatatat(TAA)4(AT)6aa(AT)6aataattaataawaataataataaaataataawa(AT)6(ATA)4*aatatattaataataawaa(AT)6aa(AT)6aataat(TAA)6aataataataaaataataatataatatataatatataat(ATA)4 | c* | 4899 | 5286 | 388 | Design Primer |
4 | NC_021426 | (T)10 | p1 | 5700 | 5709 | 10 | Design Primer |
5 | NC_021426 | (T)10atttgtatataatgtataatggcaaatagatccataaaatcatcaaatcaattagactattatttgagtcttttttgttcttccttcccgaaaaag(A)10 | c | 6030 | 6145 | 116 | Design Primer |
6 | NC_021426 | (A)17 | p1 | 9304 | 9320 | 17 | Design Primer |
7 | NC_021426 | (A)11 | p1 | 9789 | 9799 | 11 | Design Primer |
8 | NC_021426 | (A)12 | p1 | 10420 | 10431 | 12 | Design Primer |
9 | NC_021426 | (T)11 | p1 | 14709 | 14719 | 11 | Design Primer |
10 | NC_021426 | (A)11 | p1 | 16427 | 16437 | 11 | Design Primer |
11 | NC_021426 | (A)10 | p1 | 18142 | 18151 | 10 | Design Primer |
12 | NC_021426 | (T)10 | p1 | 20189 | 20198 | 10 | Design Primer |
13 | NC_021426 | (A)11 | p1 | 30306 | 30316 | 11 | Design Primer |
14 | NC_021426 | (TTC)4 | p3 | 31602 | 31613 | 12 | Design Primer |
15 | NC_021426 | (AATA)3taataatataatataaat(ATA)4aataataatcaaaataataataaataataataaaaatataatataaattataaataaatcaaataagtaatata(AAT)4 | c | 34555 | 34682 | 128 | Design Primer |
16 | NC_021426 | (A)11 | p1 | 39963 | 39973 | 11 | Design Primer |
17 | NC_021426 | (T)13c(A)10 | c | 40375 | 40398 | 24 | Design Primer |
18 | NC_021426 | (A)10 | p1 | 41060 | 41069 | 10 | Design Primer |
19 | NC_021426 | (TTTCT)3 | p5 | 45648 | 45662 | 15 | Design Primer |
20 | NC_021426 | (A)15 | p1 | 46189 | 46203 | 15 | Design Primer |
21 | NC_021426 | (TAAA)3(A)12* | c* | 48049 | 48069 | 21 | Design Primer |
22 | NC_021426 | (A)12 | p1 | 48322 | 48333 | 12 | Design Primer |
23 | NC_021426 | (T)15aacggtttttcacaagaaaaaaaaatgta(T)10 | c | 48889 | 48942 | 54 | Design Primer |
24 | NC_021426 | (T)12 | p1 | 50271 | 50282 | 12 | Design Primer |
25 | NC_021426 | (A)10 | p1 | 51091 | 51100 | 10 | Design Primer |
26 | NC_021426 | (A)11 | p1 | 51490 | 51500 | 11 | Design Primer |
27 | NC_021426 | (AGTT)3gaaaaacccaaaagtctagtctagaggagttgaagtatgagaatagacaagcttaatctcagatacagtgcaaatagaatctgatctcctttca(T)10 | c | 53048 | 53163 | 116 | Design Primer |
28 | NC_021426 | (T)10 | p1 | 53339 | 53348 | 10 | Design Primer |
29 | NC_021426 | (T)11 | p1 | 55604 | 55614 | 11 | Design Primer |
30 | NC_021426 | (C)10 | p1 | 55999 | 56008 | 10 | Design Primer |
31 | NC_021426 | (T)11 | p1 | 57547 | 57557 | 11 | Design Primer |
32 | NC_021426 | (ATA)4 | p3 | 59553 | 59564 | 12 | Design Primer |
33 | NC_021426 | (T)10 | p1 | 68604 | 68613 | 10 | Design Primer |
34 | NC_021426 | (ATCTA)3 | p5 | 68778 | 68792 | 15 | Design Primer |
35 | NC_021426 | (A)10 | p1 | 68969 | 68978 | 10 | Design Primer |
36 | NC_021426 | (AAAG)3 | p4 | 70536 | 70547 | 12 | Design Primer |
37 | NC_021426 | (A)11 | p1 | 70911 | 70921 | 11 | Design Primer |
38 | NC_021426 | (TTA)4ctattactctattgattattgattgcaaagaaatctttcataattggatttctagttagcaacttcta(T)10(TTC)4* | c* | 72854 | 72953 | 100 | Design Primer |
39 | NC_021426 | (AT)9 | p2 | 73275 | 73292 | 18 | Design Primer |
40 | NC_021426 | (A)16gaatcagagaagaagaaattc(T)13 | c | 73777 | 73826 | 50 | Design Primer |
41 | NC_021426 | (A)16 | p1 | 75726 | 75741 | 16 | Design Primer |
42 | NC_021426 | (A)10 | p1 | 76681 | 76690 | 10 | Design Primer |
43 | NC_021426 | (T)14 | p1 | 76896 | 76909 | 14 | Design Primer |
44 | NC_021426 | (A)11 | p1 | 81823 | 81833 | 11 | Design Primer |
45 | NC_021426 | (T)10aataaag(A)17 | c | 83282 | 83315 | 34 | Design Primer |
46 | NC_021426 | (TTTA)3 | p4 | 86006 | 86017 | 12 | Design Primer |
47 | NC_021426 | (T)13gaatctgttctttcaatgcaaagggcgaagg(A)10 | c | 86485 | 86538 | 54 | Design Primer |
48 | NC_021426 | (T)10 | p1 | 87599 | 87608 | 10 | Design Primer |
49 | NC_021426 | (T)16 | p1 | 89609 | 89624 | 16 | Design Primer |
50 | NC_021426 | (T)10 | p1 | 108427 | 108436 | 10 | Design Primer |
51 | NC_021426 | (A)10 | p1 | 118854 | 118863 | 10 | Design Primer |
52 | NC_021426 | (T)10 | p1 | 120424 | 120433 | 10 | Design Primer |
53 | NC_021426 | (T)10 | p1 | 121028 | 121037 | 10 | Design Primer |
54 | NC_021426 | (T)10 | p1 | 122665 | 122674 | 10 | Design Primer |
55 | NC_021426 | (A)10 | p1 | 126258 | 126267 | 10 | Design Primer |
56 | NC_021426 | (T)11 | p1 | 127885 | 127895 | 11 | Design Primer |
57 | NC_021426 | (TAA)4 | p3 | 130694 | 130705 | 12 | Design Primer |
58 | NC_021426 | (T)10 | p1 | 131951 | 131960 | 10 | Design Primer |
59 | NC_021426 | (CATT)3 | p4 | 132830 | 132841 | 12 | Design Primer |
60 | NC_021426 | (A)11 | p1 | 134406 | 134416 | 11 | Design Primer |
61 | NC_021426 | (A)10 | p1 | 142993 | 143002 | 10 | Design Primer |
62 | NC_021426 | (A)16 | p1 | 161805 | 161820 | 16 | Design Primer |
63 | NC_021426 | (A)10 | p1 | 163821 | 163830 | 10 | Design Primer |
64 | NC_021426 | (T)10ccttcgccctttgcattgaaagaacagattc(A)13 | c | 164891 | 164944 | 54 | Design Primer |
65 | NC_021426 | (ATAA)3 | p4 | 165411 | 165422 | 12 | Design Primer |