Compound Compound Repeats of Quercus rubra plastid
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| S.No. | Genome ID | SSR | SSR Type | Start | End | Tract Length | Primer Design |
|---|---|---|---|---|---|---|---|
| 1 | NC_020152 | (C)11(A)10 | c | 4427 | 4447 | 21 | Design Primer |
| 2 | NC_020152 | (T)11gaatataatgaacctatcctctcttctctattcatatttcatattc(A)11tatcaaaacggatcattaatccaagaccagaatattcggaggactcttctgaacaaacaaataattgtcagcaacgttgtttc(T)12caaatccaaagaatttttcttaatttatacgtaggtcatcgattcagcattggataaaaaagaggggttgaaatactcataaattttttccaataaat(AATA)3g(A)12 | c | 13998 | 14283 | 286 | Design Primer |
| 3 | NC_020152 | (C)13(A)12gaaaagatctactctttactcaagtttccaatttagaccaagcaacatttcattaattca(T)11 | c | 24714 | 24809 | 96 | Design Primer |
| 4 | NC_020152 | (AAAT)3aaaataagagagcattcccaaggggaatgaaattctgctatttgttctccctttcaaagaaaacgaagagatgaattgatgta(T)10 | c | 33696 | 33800 | 105 | Design Primer |
| 5 | NC_020152 | (A)15cgataaatctggaaatctgggaagagggatagggatcaacaagttattgaaaattg(T)11 | c | 35094 | 35175 | 82 | Design Primer |
| 6 | NC_020152 | (T)10atttatcctttttatttctattttttattgtttctatttttatatattata(TATT)3tgaatagaaacaa(T)13 | c | 54231 | 54329 | 99 | Design Primer |
| 7 | NC_020152 | (A)15tagagtaaggttttattagtatagaaaaaattttcatgatatctgatcaatagaa(AT)6 | c | 69128 | 69209 | 82 | Design Primer |
| 8 | NC_020152 | (C)12(T)10 | c | 70817 | 70838 | 22 | Design Primer |
| 9 | NC_020152 | (A)11caaaat(A)10 | c | 76719 | 76745 | 27 | Design Primer |
| 10 | NC_020152 | (A)10gaaacctataattttg(T)11 | c | 87259 | 87295 | 37 | Design Primer |
| 11 | NC_020152 | (A)12t(A)11 | c | 118997 | 119020 | 24 | Design Primer |
| 12 | NC_020152 | (A)11ttgtattctttcta(T)11cgttcctattcttctttcttttctg(A)11 | c | 127580 | 127651 | 72 | Design Primer |