Compound Repeats of Phlebia radiata strain 79 mitochondrion
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| S.No. | Genome ID | SSR | SSR Type | Start | End | Tract Length | Primer Design |
|---|---|---|---|---|---|---|---|
| 1 | NC_020148 | (A)11tgataataaaaataatttataaaaaccaaaacttatta(TAT)4 | c | 7016 | 7076 | 61 | Design Primer |
| 2 | NC_020148 | (T)10aatttatt(A)10 | c | 19633 | 19660 | 28 | Design Primer |
| 3 | NC_020148 | (T)10gttttaatttatcctctgccctgactcaggttgagtcaagggt(TAAA)3 | c | 31283 | 31347 | 65 | Design Primer |
| 4 | NC_020148 | (A)11gcgacgctcctacggcaaaaaatgtttaaata(T)11 | c | 34324 | 34377 | 54 | Design Primer |
| 5 | NC_020148 | (T)10agcaaaggagccggcaaaaagcatctgaaacaatgtttaaacatttttgtcctctataaaggctacgcttttttaag(C)12taatctgctatagcctagcgccctaaagagaggcgcgcgcct(A)11 | c | 34972 | 35123 | 152 | Design Primer |
| 6 | NC_020148 | (T)13ccgtaggttttttgtaagtcttagacccttaagtagctttgttttttgttttaataaaaaagcgcctccctgcctgccgttaggc(TAAAT)3aaaataa(AAATT)4 | c | 35627 | 35766 | 140 | Design Primer |
| 7 | NC_020148 | (T)11aatttaaatt(A)12tacaggcagg(GA)6 | c | 40034 | 40088 | 55 | Design Primer |
| 8 | NC_020148 | (A)12tcgttgcgctacgtaaactttttttaatgcttaagcttatcataatttaatctatagatacagctgccagtagccttta(T)10aatttaaaataaatt(A)10 | c | 40400 | 40525 | 126 | Design Primer |
| 9 | NC_020148 | (T)10aatttatt(A)10caaaggcaggcagcaagcgaggcttgggcgtctctttttaa(TATT)3aa(ATTTT)6 | c | 44704 | 44816 | 113 | Design Primer |
| 10 | NC_020148 | (T)11aagtcggctgagcttgttttttactattattatgtcctagcaatataa(T)11 | c | 44957 | 45026 | 70 | Design Primer |
| 11 | NC_020148 | (A)10gaacaccttatagagtataaatacccatttaaaaatatggttcc(T)10 | c | 54522 | 54585 | 64 | Design Primer |
| 12 | NC_020148 | (ATCT)3ccaaatcaaaatgctgctaact(A)11gccttgtttgtttagccatttttattaggctacgctaattaaaag(A)10tgtttgtttttttg(TGTT)3 | c | 55985 | 56110 | 126 | Design Primer |
| 13 | NC_020148 | (CAGG)3ggcttgtggctctccctcttgactcttaagcaagcatcctttggagccggccgctatcaagcttgattaataaa(G)13 | c | 60357 | 60455 | 99 | Design Primer |
| 14 | NC_020148 | (T)10aatccgtagttattatta(T)10 | c | 63864 | 63901 | 38 | Design Primer |
| 15 | NC_020148 | (T)10a(T)10 | c | 68971 | 68991 | 21 | Design Primer |
| 16 | NC_020148 | (T)12aaat(A)11 | c | 73876 | 73902 | 27 | Design Primer |
| 17 | NC_020148 | (T)10atttt(A)10taaaggctaggggagacactaaaacacctatgggccctggctaaaattaaaaaattatatagctagcaccgtaagtat(GCAA)3 | c | 74827 | 74941 | 115 | Design Primer |
| 18 | NC_020148 | (A)10gtttacaatt(A)10gagcgtagtattaattggttagtattgtgatctccaaaatcatcggaaggtgttcgaatcgcctcgctcttgttagact(AAATA)5 | c | 78268 | 78401 | 134 | Design Primer |
| 19 | NC_020148 | (T)10attctt(A)11 | c | 78532 | 78558 | 27 | Design Primer |
| 20 | NC_020148 | (T)10aaccctctttatagggctggtgttggcttggctaggctggggtgagctact(A)10 | c | 79461 | 79531 | 71 | Design Primer |
| 21 | NC_020148 | (T)11aataaatt(A)11 | c | 80092 | 80121 | 30 | Design Primer |
| 22 | NC_020148 | (TTTAT)18ttctaaaaaaaatatccttttaaatcagtgcaatctt(A)10 | c | 90563 | 90699 | 137 | Design Primer |
| 23 | NC_020148 | (TTTG)3tctgccgctccgcaggctaggcttgtagcatag(T)10aagtagctagccgtaggacttgcttttttgccgtaggagcgtcgc(T)11aagagacgaggcaaagagacgcgcttaagcgcgtattcgtagcttttactt(A)11 | c | 91520 | 91692 | 173 | Design Primer |
| 24 | NC_020148 | (A)10catttattatgagttgtagtttaatttggaataacatcattttttggtggtgaaagatatcagttcgaatctggtcaactcag(TTA)4 | c | 92219 | 92323 | 105 | Design Primer |
| 25 | NC_020148 | (A)11(T)13 | c | 93936 | 93959 | 24 | Design Primer |
| 26 | NC_020148 | (TGCC)4gc(AGGCT)6tggatcgcagctt(A)11 | c | 102615 | 102686 | 72 | Design Primer |
| 27 | NC_020148 | (TCGCTT)3tctagctgcaagagaggtagcaaagcttttagccctttcttatctaggggcggagcccagccaaaggcaacacatttagtcgctt(A)10 | c | 107813 | 107925 | 113 | Design Primer |
| 28 | NC_020148 | (A)10cataggatctt(A)10 | c | 109254 | 109284 | 31 | Design Primer |
| 29 | NC_020148 | (T)12attttatgtgcattaattgcaataattactaactcttttatttaataaatttttaaaatatttta(T)10 | c | 112677 | 112763 | 87 | Design Primer |
| 30 | NC_020148 | (T)10aatt(A)10taaaggctacaagaaagcatcctttgtagccactatcaagcttggatttaag(CT)6agccaaaggcagctagcgcgcccccgtattcgc(A)10 | c | 117645 | 117775 | 131 | Design Primer |
| 31 | NC_020148 | (T)11aagctgcgctcctacggctctttagaaaaacaaaagatgtttaagacaagagtaggagcgtagcgagggctttctagcagtacaaagggattgtattctc(T)10 | c | 117900 | 118020 | 121 | Design Primer |
| 32 | NC_020148 | (T)10atttattc(T)10 | c | 126335 | 126362 | 28 | Design Primer |
| 33 | NC_020148 | (AAATT)9tagagtagtgttataaaaatatgctctctttatggtagcatattttttta(T)11 | c | 127390 | 127495 | 106 | Design Primer |
| 34 | NC_020148 | (T)11aagctgcgatcca(AGCCT)4gcggccaaaataaaataaaactaaag(AGGC)3 | c | 129129 | 129210 | 82 | Design Primer |
| 35 | NC_020148 | (TTATGA)3ttattattag(TAT)4gattagtattatttttagaaataaaaataggtgcaaccatag(ATA)4 | c | 133724 | 133817 | 94 | Design Primer |
| 36 | NC_020148 | (T)10aatttattttaaatt(A)10taaaggctactggcagctgtatctatagattaaattatgataagcttaagcattaaaaaaagtttacgtagcgcaacga(T)12 | c | 136182 | 136307 | 126 | Design Primer |
| 37 | NC_020148 | (CT)6ccctgcctgta(T)11aatttaaatt(A)11 | c | 136618 | 136672 | 55 | Design Primer |
| 38 | NC_020148 | (ATTT)3aataataaattagtctaaaatataattaattatacctttgaaattaaaatttatttactgccctcttaagcctaggcctaaaaaaaaa(T)12 | c | 146448 | 146559 | 112 | Design Primer |
| 39 | NC_020148 | (T)10accccctcctcgctagccaggcggcctgcaggcgctacttaagagtcccttaagtttactta(T)11 | c | 148086 | 148168 | 83 | Design Primer |
| 40 | NC_020148 | (T)11attcttagacaaggccaagggtaggtataaataaatatattta(T)10 | c | 149671 | 149734 | 64 | Design Primer |
| 41 | NC_020148 | (TATT)3ttatttagcctacggattattaagcaaggctatttttttgcctggtccctgcctttgcaaggggagagagtaagagggga(G)11 | c | 153667 | 153769 | 103 | Design Primer |
| 42 | NC_020148 | (A)11ttcttacttttagaattggggctacacttttactttaa(C)12 | c | 155714 | 155774 | 61 | Design Primer |