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ChloroMitoSSRDB 2.00 Webserver cum Database of Cholorplast and Mitochondrial Microsatellites

Back To Genome Repeat Summary

All Repeats of Phlebia radiata strain 79 mitochondrion

Click on Table Heading To Sort Results Accordingly
S.No.Genome IDSSRSSR TypeStartEndTract LengthPrimer Design
1NC_020148(A)10p136437310Design Primer
2NC_020148(ATT)4p31784179512Design Primer
3NC_020148(T)10p12953296210Design Primer
4NC_020148(TAT)4p35015502612Design Primer
5NC_020148(A)11tgataataaaaataatttataaaaaccaaaacttatta(TAT)4c7016707661Design Primer
6NC_020148(T)12p17933794412Design Primer
7NC_020148(T)11p18090810011Design Primer
8NC_020148(TTTA)3p48214822512Design Primer
9NC_020148(GCCTA)3p59368938215Design Primer
10NC_020148(TTA)4p3100421005312Design Primer
11NC_020148(A)10p1117151172410Design Primer
12NC_020148(A)11p1131271313711Design Primer
13NC_020148(T)11p1147371474711Design Primer
14NC_020148(AATT)3p4160561606712Design Primer
15NC_020148(T)10aatttatt(A)10c196331966028Design Primer
16NC_020148(A)10p1217942180310Design Primer
17NC_020148(A)10p1222802228910Design Primer
18NC_020148(AAGGA)3p5236172363115Design Primer
19NC_020148(A)10p1245092451810Design Primer
20NC_020148(A)12(AAAAAT)3*c*247792480325Design Primer
21NC_020148(T)10p1258432585210Design Primer
22NC_020148(TGGC)3p4290782908912Design Primer
23NC_020148(T)10p1303153032410Design Primer
24NC_020148(A)10p1306393064810Design Primer
25NC_020148(T)10gttttaatttatcctctgccctgactcaggttgagtcaagggt(TAAA)3c312833134765Design Primer
26NC_020148(T)11p1331923320211Design Primer
27NC_020148(A)11gcgacgctcctacggcaaaaaatgtttaaata(T)11c343243437754Design Primer
28NC_020148(A)16p1346173463216Design Primer
29NC_020148(A)11p1347603477011Design Primer
30NC_020148(T)10agcaaaggagccggcaaaaagcatctgaaacaatgtttaaacatttttgtcctctataaaggctacgcttttttaag(C)12taatctgctatagcctagcgccctaaagagaggcgcgcgcct(A)11c3497235123152Design Primer
31NC_020148(T)13ccgtaggttttttgtaagtcttagacccttaagtagctttgttttttgttttaataaaaaagcgcctccctgcctgccgttaggc(TAAAT)3aaaataa(AAATT)4c3562735766140Design Primer
32NC_020148(A)12p1366423665312Design Primer
33NC_020148(A)10p1377133772210Design Primer
34NC_020148(ATAAA)3p5380103802415Design Primer
35NC_020148(T)11p1386993870911Design Primer
36NC_020148(GTG)4p3390133902412Design Primer
37NC_020148(T)11aatttaaatt(A)12tacaggcagg(GA)6c400344008855Design Primer
38NC_020148(A)12tcgttgcgctacgtaaactttttttaatgcttaagcttatcataatttaatctatagatacagctgccagtagccttta(T)10aatttaaaataaatt(A)10c4040040525126Design Primer
39NC_020148(T)12p1423124232312Design Primer
40NC_020148(A)16ttttttaaaaaaacaaaaaacaaaaaataatcatataaaccccccttctaaatttataacttatttaatta(AAAC)3(AAACA)4*c*4337343487115Design Primer
41NC_020148(A)13p1437584377013Design Primer
42NC_020148(T)10aatttatt(A)10caaaggcaggcagcaagcgaggcttgggcgtctctttttaa(TATT)3aa(ATTTT)6c4470444816113Design Primer
43NC_020148(T)11aagtcggctgagcttgttttttactattattatgtcctagcaatataa(T)11c449574502670Design Primer
44NC_020148(ATTT)4p4475384755316Design Primer
45NC_020148(ATTT)3p4481474815812Design Primer
46NC_020148(TTTA)3p4485174852812Design Primer
47NC_020148(T)10p1491494915810Design Primer
48NC_020148(ATA)4p3496674967812Design Primer
49NC_020148(AATT)3p4536075361812Design Primer
50NC_020148(A)10gaacaccttatagagtataaatacccatttaaaaatatggttcc(T)10c545225458564Design Primer
51NC_020148(ATCT)3ccaaatcaaaatgctgctaact(A)11gccttgtttgtttagccatttttattaggctacgctaattaaaag(A)10tgtttgtttttttg(TGTT)3c5598556110126Design Primer
52NC_020148(A)10p1573245733310Design Primer
53NC_020148(AAT)4p3580575806812Design Primer
54NC_020148(A)11p1602026021211Design Primer
55NC_020148(CAGG)3ggcttgtggctctccctcttgactcttaagcaagcatcctttggagccggccgctatcaagcttgattaataaa(G)13c603576045599Design Primer
56NC_020148(TTAAA)8(A)10*c*608996094547Design Primer
57NC_020148(TAT)4p3625486255912Design Primer
58NC_020148(T)10p1629236293210Design Primer
59NC_020148(T)10aatccgtagttattatta(T)10c638646390138Design Primer
60NC_020148(ATT)4p3643156432612Design Primer
61NC_020148(AT)6p2680776808812Design Primer
62NC_020148(A)10p1683306833910Design Primer
63NC_020148(T)10a(T)10c689716899121Design Primer
64NC_020148(T)11p1698456985511Design Primer
65NC_020148(TTTA)3p4711477115812Design Primer
66NC_020148(T)12aaat(A)11c738767390227Design Primer
67NC_020148(A)11p1746907470011Design Primer
68NC_020148(T)10atttt(A)10taaaggctaggggagacactaaaacacctatgggccctggctaaaattaaaaaattatatagctagcaccgtaagtat(GCAA)3c7482774941115Design Primer
69NC_020148(A)13p1764097642113Design Primer
70NC_020148(T)10p1769457695410Design Primer
71NC_020148(A)10gtttacaatt(A)10gagcgtagtattaattggttagtattgtgatctccaaaatcatcggaaggtgttcgaatcgcctcgctcttgttagact(AAATA)5c7826878401134Design Primer
72NC_020148(T)10attctt(A)11c785327855827Design Primer
73NC_020148(A)10p1788557886410Design Primer
74NC_020148(T)10aaccctctttatagggctggtgttggcttggctaggctggggtgagctact(A)10c794617953171Design Primer
75NC_020148(A)11p1797947980411Design Primer
76NC_020148(T)11aataaatt(A)11c800928012130Design Primer
77NC_020148(TAAAAA)4p6802548027724Design Primer
78NC_020148(A)10p1805568056510Design Primer
79NC_020148(T)13p1809738098513Design Primer
80NC_020148(A)10p1825278253610Design Primer
81NC_020148(TTAG)3p4835988360912Design Primer
82NC_020148(AAAAT)7p5848308486435Design Primer
83NC_020148(A)10p1862488625710Design Primer
84NC_020148(T)14p1889768898914Design Primer
85NC_020148(TTAA)3p4890918910212Design Primer
86NC_020148(T)10p1893758938410Design Primer
87NC_020148(A)11p1903729038211Design Primer
88NC_020148(TTTAT)18ttctaaaaaaaatatccttttaaatcagtgcaatctt(A)10c9056390699137Design Primer
89NC_020148(TTTG)3tctgccgctccgcaggctaggcttgtagcatag(T)10aagtagctagccgtaggacttgcttttttgccgtaggagcgtcgc(T)11aagagacgaggcaaagagacgcgcttaagcgcgtattcgtagcttttactt(A)11c9152091692173Design Primer
90NC_020148(A)10catttattatgagttgtagtttaatttggaataacatcattttttggtggtgaaagatatcagttcgaatctggtcaactcag(TTA)4c9221992323105Design Primer
91NC_020148(T)10p1934289343710Design Primer
92NC_020148(ATT)4p3936079361812Design Primer
93NC_020148(A)11(T)13c939369395924Design Primer
94NC_020148(T)10p1962599626810Design Primer
95NC_020148(T)10p1964189642710Design Primer
96NC_020148(TTATT)3p5969289694215Design Primer
97NC_020148(A)10p1973759738410Design Primer
98NC_020148(A)10p1975419755010Design Primer
99NC_020148(ATATT)3p5979559796915Design Primer
100NC_020148(A)10p1989389894710Design Primer
101NC_020148(T)10p1999269993510Design Primer
102NC_020148(T)10p110082810083710Design Primer
103NC_020148(ATTG)3p410168110169212Design Primer
104NC_020148(TGCC)4gc(AGGCT)6tggatcgcagctt(A)11c10261510268672Design Primer
105NC_020148(AAAT)3p410289010290112Design Primer
106NC_020148(T)12p110740010741112Design Primer
107NC_020148(C)11p110769710770711Design Primer
108NC_020148(TCGCTT)3tctagctgcaagagaggtagcaaagcttttagccctttcttatctaggggcggagcccagccaaaggcaacacatttagtcgctt(A)10c107813107925113Design Primer
109NC_020148(T)10p110867410868310Design Primer
110NC_020148(TTATA)3p510894710896115Design Primer
111NC_020148(A)10cataggatctt(A)10c10925410928431Design Primer
112NC_020148(A)10p111052811053710Design Primer
113NC_020148(TAAA)3p411116111117212Design Primer
114NC_020148(T)10p111154311155210Design Primer
115NC_020148(TATAAA)3p611248711250418Design Primer
116NC_020148(T)12attttatgtgcattaattgcaataattactaactcttttatttaataaatttttaaaatatttta(T)10c11267711276387Design Primer
117NC_020148(T)10p111387011387910Design Primer
118NC_020148(T)11p111401811402811Design Primer
119NC_020148(AGCG)3p411471411472512Design Primer
120NC_020148(A)10p111488611489510Design Primer
121NC_020148(T)10p111519111520010Design Primer
122NC_020148(T)10p111535911536810Design Primer
123NC_020148(AAAAC)3p511564511565915Design Primer
124NC_020148(T)10p111586111587010Design Primer
125NC_020148(A)10p111615711616610Design Primer
126NC_020148(AAAATT)3p611686111687818Design Primer
127NC_020148(ATATAA)10p611703511709460Design Primer
128NC_020148(A)13p111720911722113Design Primer
129NC_020148(T)10aatt(A)10taaaggctacaagaaagcatcctttgtagccactatcaagcttggatttaag(CT)6agccaaaggcagctagcgcgcccccgtattcgc(A)10c117645117775131Design Primer
130NC_020148(T)11aagctgcgctcctacggctctttagaaaaacaaaagatgtttaagacaagagtaggagcgtagcgagggctttctagcagtacaaagggattgtattctc(T)10c117900118020121Design Primer
131NC_020148(ATTAAA)14p611837411845784Design Primer
132NC_020148(T)10atttattc(T)10c12633512636228Design Primer
133NC_020148(A)11p112691712692711Design Primer
134NC_020148(AAAAC)3(AAAC)3*a(AAAC)8c*12716112721656Design Primer
135NC_020148(AAATT)9tagagtagtgttataaaaatatgctctctttatggtagcatattttttta(T)11c127390127495106Design Primer
136NC_020148(T)11p112879712880711Design Primer
137NC_020148(T)11aagctgcgatcca(AGCCT)4gcggccaaaataaaataaaactaaag(AGGC)3c12912912921082Design Primer
138NC_020148(T)10p113198113199010Design Primer
139NC_020148(ATT)4p313268713269812Design Primer
140NC_020148(TTATGA)3ttattattag(TAT)4gattagtattatttttagaaataaaaataggtgcaaccatag(ATA)4c13372413381794Design Primer
141NC_020148(ATAA)3p413406813407912Design Primer
142NC_020148(A)12p113438313439412Design Primer
143NC_020148(T)10aatttattttaaatt(A)10taaaggctactggcagctgtatctatagattaaattatgataagcttaagcattaaaaaaagtttacgtagcgcaacga(T)12c136182136307126Design Primer
144NC_020148(CT)6ccctgcctgta(T)11aatttaaatt(A)11c13661813667255Design Primer
145NC_020148(CCA)4p313768113769212Design Primer
146NC_020148(A)11p113799713800711Design Primer
147NC_020148(TTTTA)3p513868113869515Design Primer
148NC_020148(T)10p113898413899310Design Primer
149NC_020148(T)12p114005314006412Design Primer
150NC_020148(ACAA)3p414433914435012Design Primer
151NC_020148(A)10p114533814534710Design Primer
152NC_020148(A)13p114616414617613Design Primer
153NC_020148(ATTT)3aataataaattagtctaaaatataattaattatacctttgaaattaaaatttatttactgccctcttaagcctaggcctaaaaaaaaa(T)12c146448146559112Design Primer
154NC_020148(T)10accccctcctcgctagccaggcggcctgcaggcgctacttaagagtcccttaagtttactta(T)11c14808614816883Design Primer
155NC_020148(T)11p114888214889211Design Primer
156NC_020148(T)10p114922714923610Design Primer
157NC_020148(T)11attcttagacaaggccaagggtaggtataaataaatatattta(T)10c14967114973464Design Primer
158NC_020148(TAAAA)7p515151015154435Design Primer
159NC_020148(T)10p115190815191710Design Primer
160NC_020148(AGGCT)3p515228815230215Design Primer
161NC_020148(T)11p115277115278111Design Primer
162NC_020148(T)10p115330615331510Design Primer
163NC_020148(TATT)3ttatttagcctacggattattaagcaaggctatttttttgcctggtccctgcctttgcaaggggagagagtaagagggga(G)11c153667153769103Design Primer
164NC_020148(A)10p115421215422110Design Primer
165NC_020148(T)12p115457915459012Design Primer
166NC_020148(T)11p115503115504111Design Primer
167NC_020148(T)18p115554515556218Design Primer
168NC_020148(A)11ttcttacttttagaattggggctacacttttactttaa(C)12c15571415577461Design Primer
169NC_020148(T)10p115590915591810Design Primer
170NC_020148(T)10p115632915633810Design Primer