Compound Compound Repeats of Dunaliella salina chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | SSR | SSR Type | Start | End | Tract Length | Primer Design |
|---|---|---|---|---|---|---|---|
| 1 | NC_016732 | (T)10aattgaaaagaatttattattaatattttcttttatt(TAAA)3 | c | 27695 | 27753 | 59 | Design Primer |
| 2 | NC_016732 | (AT)7gacccgtgagggcggcccgccaaaattttc(A)11 | c | 28473 | 28527 | 55 | Design Primer |
| 3 | NC_016732 | (T)11acacaggctttaaatact(A)11 | c | 30333 | 30372 | 40 | Design Primer |
| 4 | NC_016732 | (T)14a(T)13 | c | 34651 | 34678 | 28 | Design Primer |
| 5 | NC_016732 | (T)12attttataa(T)17 | c | 37480 | 37517 | 38 | Design Primer |
| 6 | NC_016732 | (T)15aattatgatttttgtaggggtttggatgaaa(T)10 | c | 38036 | 38091 | 56 | Design Primer |
| 7 | NC_016732 | (T)11gag(A)14 | c | 47832 | 47859 | 28 | Design Primer |
| 8 | NC_016732 | (T)14attttttttaaaagaacataaaaatgtatattacatctttaata(T)19agtatagtatttgtaactatctattaatattaatt(AATA)3aaaatttataaaattttactttgctaaaattttttcttttaattatttttagcaagtttattcttctttaacttatttattattataacg(T)13 | c | 48783 | 49009 | 227 | Design Primer |
| 9 | NC_016732 | (T)10atttttatgtacgtatttgtatatacatacaataattaatattaataatgtatattatgcatttaaattattcgtatatatata(T)11 | c | 58587 | 58691 | 105 | Design Primer |
| 10 | NC_016732 | (A)12tttataacccgtgagggcaactttataaaatttttttttaccgcttaggctaagacctggttcgtcgt(A)12ttatttcttatt(TTTA)3 | c | 64505 | 64620 | 116 | Design Primer |
| 11 | NC_016732 | (T)21aatatctaaaga(T)13aaatttagcctgctacaggaatcgaacccgcaacctttggtttacaaaaccaatactctaccgattgagttaaacaggcttc(A)21tg(A)17 | c | 67658 | 67825 | 168 | Design Primer |
| 12 | NC_016732 | (T)10ctaa(ATTT)3 | c | 73614 | 73639 | 26 | Design Primer |
| 13 | NC_016732 | (A)20tttctttggagccccccctccccgtgagggggctcacgggacaagcttccggt(A)11 | c | 81109 | 81192 | 84 | Design Primer |
| 14 | NC_016732 | (T)10at(A)10tttttcttaagttcaaaaacaa(TTAT)3acaaataaataatatatttgaaacgtttaattat(A)11gaaaatattactttctttctaaaatttatgctagaataaattaaagccataaacac(AT)7 | c | 81823 | 81993 | 171 | Design Primer |
| 15 | NC_016732 | (A)12tttctaaaaagtccgctcgtagagaagaaaattctttaagagaagaaaatttataaaattt(A)11 | c | 83873 | 83956 | 84 | Design Primer |
| 16 | NC_016732 | (T)17aaggtgagtaggatcttcagagactttatgtttcctaacaaacattagaaataaaaat(A)12 | c | 84100 | 84186 | 87 | Design Primer |
| 17 | NC_016732 | (TTTTTA)3(T)10 | c | 87844 | 87871 | 28 | Design Primer |
| 18 | NC_016732 | (GCCC)3gtgagggaaacgtctaaaaaaaaatttccggacaacccgtcccgtga(G)11 | c | 94397 | 94466 | 70 | Design Primer |
| 19 | NC_016732 | (A)12taaatagaaaattccgaaggaatttctcggaagaaattccttcggaattttcttccgaaaaaattatttttctatgttataatag(A)10 | c | 102117 | 102223 | 107 | Design Primer |
| 20 | NC_016732 | (AT)7ttgaaatgttttaa(T)12aatc(T)10 | c | 107074 | 107127 | 54 | Design Primer |
| 21 | NC_016732 | (TTC)4gtaggtcacttatggcatgctggtcgtgctcg(TGC)4 | c | 122817 | 122872 | 56 | Design Primer |
| 22 | NC_016732 | (A)15cacaaacaaaaatgaaaataattaattttttgttattaaaattcgaatctgatttaaaacattctgctaaattttatttagagatttcataattct(TA)7 | c | 123249 | 123373 | 125 | Design Primer |
| 23 | NC_016732 | (A)10taagggtacttataagaataaaaacgaaaaagatgagaattgacaaacgaaacaattctgataaattaagaagcaagggaatgttc(A)14 | c | 127892 | 128001 | 110 | Design Primer |
| 24 | NC_016732 | (T)11cggcgggtctgttttctttgagaaaaatccgcccgtgaggaaaacgtct(A)10 | c | 146534 | 146603 | 70 | Design Primer |
| 25 | NC_016732 | (A)14(TA)6 | c | 146979 | 147004 | 26 | Design Primer |
| 26 | NC_016732 | (A)10gatagttattc(T)10gctttttttgacatacgatgtccattactagatagatactaaatttatatctagt(A)12 | c | 147231 | 147328 | 98 | Design Primer |
| 27 | NC_016732 | (TA)7(AT)7 | c | 147981 | 148008 | 28 | Design Primer |
| 28 | NC_016732 | (T)11at(A)12taacttgggaaaattgagat(A)15 | c | 156150 | 156209 | 60 | Design Primer |
| 29 | NC_016732 | (TTAT)4tttca(T)10 | c | 161741 | 161771 | 31 | Design Primer |
| 30 | NC_016732 | (A)14ttttgacccgtgaagggaacatatgaaaatattttaagaatattaaaaat(A)14(CA)6 | c | 162053 | 162142 | 90 | Design Primer |
| 31 | NC_016732 | (A)14cacacacaaaaatgccacgtcatccatt(A)10 | c | 163325 | 163376 | 52 | Design Primer |
| 32 | NC_016732 | (A)16ttttaagtcggacccgtgagggaaaccaaagaaaataaaa(T)12 | c | 170530 | 170597 | 68 | Design Primer |
| 33 | NC_016732 | (T)16atttagatttatttttattaaaaaaatatctttataaataaattttagcgaagcaaaaac(A)10 | c | 173280 | 173365 | 86 | Design Primer |
| 34 | NC_016732 | (T)12(A)13t(A)13 | c | 182614 | 182652 | 39 | Design Primer |
| 35 | NC_016732 | (A)14tttttgat(A)11 | c | 205795 | 205827 | 33 | Design Primer |
| 36 | NC_016732 | (T)10aattattatttttttaattattattttttttaattattattttttttaatta(T)13aatta(T)23 | c | 220356 | 220458 | 103 | Design Primer |
| 37 | NC_016732 | (T)10gagttataaag(T)11 | c | 221179 | 221210 | 32 | Design Primer |
| 38 | NC_016732 | (CGGG)3ccgttttctcaaagaaaacggacccgccgaaaaaaaatt(A)13 | c | 221602 | 221665 | 64 | Design Primer |
| 39 | NC_016732 | (T)14ctc(A)11 | c | 225369 | 225396 | 28 | Design Primer |
| 40 | NC_016732 | (TA)8gaatacatatatataaatatataagttatatataatatataagtttaatta(T)10 | c | 228962 | 229038 | 77 | Design Primer |
| 41 | NC_016732 | (T)10(A)22 | c | 230927 | 230958 | 32 | Design Primer |
| 42 | NC_016732 | (A)21tttcttccgaaaataaaattttataaatttactttgttaattttctaaaaaatt(A)15 | c | 232454 | 232543 | 90 | Design Primer |
| 43 | NC_016732 | (A)13tgccattcgtaagtaacttgtctgtttttatattaagtttaattttttatgtg(T)10gtataaaaaaagaggaactatgttacaatatt(A)10tatataaaaatttaaaccttttttgtataaattatggaagtgatattactcctcgtattaat(AAATAA)3aagagtttggagatcttttagaagtttagattagaatctt(A)15 | c | 232940 | 233192 | 253 | Design Primer |
| 44 | NC_016732 | (TTATG)3tatagaaaat(A)15 | c | 234270 | 234309 | 40 | Design Primer |
| 45 | NC_016732 | (T)14gaaagt(A)10 | c | 243566 | 243595 | 30 | Design Primer |
| 46 | NC_016732 | (T)14gaacattcccttgcttcttaatttatcagaattgtttcgtttgtcaattctcatctttttcgtttttattcttataagtaccctta(T)10 | c | 268383 | 268492 | 110 | Design Primer |