All Repeats of Spirodela polyrhiza chloroplast
Click on Table Heading To Sort Results Accordingly
S.No. | Genome ID | SSR | SSR Type | Start | End | Tract Length | Primer Design |
---|---|---|---|---|---|---|---|
1 | NC_015891 | (TTAT)3 | p4 | 66 | 77 | 12 | Design Primer |
2 | NC_015891 | (C)10 | p1 | 5407 | 5416 | 10 | Design Primer |
3 | NC_015891 | (A)10 | p1 | 6614 | 6623 | 10 | Design Primer |
4 | NC_015891 | (AT)7 | p2 | 8031 | 8044 | 14 | Design Primer |
5 | NC_015891 | (AT)6aaattaaat(A)12 | c | 9948 | 9980 | 33 | Design Primer |
6 | NC_015891 | (TTAA)3aaatattaaaaaatattatatgtatatgattctataaatcatgaatatattatattacgatttttg(TAT)4agtc(TAT)4 | c | 10321 | 10426 | 106 | Design Primer |
7 | NC_015891 | (T)11 | p1 | 11927 | 11937 | 11 | Design Primer |
8 | NC_015891 | (TA)6 | p2 | 14578 | 14589 | 12 | Design Primer |
9 | NC_015891 | (T)10 | p1 | 15375 | 15384 | 10 | Design Primer |
10 | NC_015891 | (A)10 | p1 | 16038 | 16047 | 10 | Design Primer |
11 | NC_015891 | (T)10 | p1 | 16517 | 16526 | 10 | Design Primer |
12 | NC_015891 | (TAA)4 | p3 | 17867 | 17878 | 12 | Design Primer |
13 | NC_015891 | (A)12 | p1 | 18614 | 18625 | 12 | Design Primer |
14 | NC_015891 | (T)11 | p1 | 20823 | 20833 | 11 | Design Primer |
15 | NC_015891 | (T)10 | p1 | 28479 | 28488 | 10 | Design Primer |
16 | NC_015891 | (TTA)5 | p3 | 30058 | 30072 | 15 | Design Primer |
17 | NC_015891 | (T)10ctattataaaagtttttaaatggcataacataaatatatatgaagatacaatcaattgaagaaaataatctcaactagatc(A)10 | c | 30319 | 30419 | 101 | Design Primer |
18 | NC_015891 | (T)11 | p1 | 31992 | 32002 | 11 | Design Primer |
19 | NC_015891 | (TTA)4 | p3 | 33421 | 33432 | 12 | Design Primer |
20 | NC_015891 | (A)10 | p1 | 33590 | 33599 | 10 | Design Primer |
21 | NC_015891 | (AT)13 | p2 | 33720 | 33745 | 26 | Design Primer |
22 | NC_015891 | (T)11 | p1 | 36097 | 36107 | 11 | Design Primer |
23 | NC_015891 | (A)14 | p1 | 36684 | 36697 | 14 | Design Primer |
24 | NC_015891 | (TAG)4 | p3 | 37307 | 37318 | 12 | Design Primer |
25 | NC_015891 | (A)12tagatatatatattttgtatatattttgatttgaaaaa(AT)6 | c | 41157 | 41218 | 62 | Design Primer |
26 | NC_015891 | (T)10 | p1 | 46514 | 46523 | 10 | Design Primer |
27 | NC_015891 | (TTTC)3 | p4 | 48029 | 48040 | 12 | Design Primer |
28 | NC_015891 | (A)10 | p1 | 49013 | 49022 | 10 | Design Primer |
29 | NC_015891 | (TA)7 | p2 | 51624 | 51637 | 14 | Design Primer |
30 | NC_015891 | (AT)7 | p2 | 51742 | 51755 | 14 | Design Primer |
31 | NC_015891 | (TAT)4 | p3 | 52035 | 52046 | 12 | Design Primer |
32 | NC_015891 | (TTAA)3 | p4 | 56384 | 56395 | 12 | Design Primer |
33 | NC_015891 | (A)10 | p1 | 56578 | 56587 | 10 | Design Primer |
34 | NC_015891 | (TTAT)3 | p4 | 60773 | 60784 | 12 | Design Primer |
35 | NC_015891 | (T)10 | p1 | 66594 | 66603 | 10 | Design Primer |
36 | NC_015891 | (A)12 | p1 | 67309 | 67320 | 12 | Design Primer |
37 | NC_015891 | (AATG)3 | p4 | 67987 | 67998 | 12 | Design Primer |
38 | NC_015891 | (A)13 | p1 | 72348 | 72360 | 13 | Design Primer |
39 | NC_015891 | (TTC)4 | p3 | 73918 | 73929 | 12 | Design Primer |
40 | NC_015891 | (TA)8 | p2 | 74259 | 74274 | 16 | Design Primer |
41 | NC_015891 | (T)12 | p1 | 75952 | 75963 | 12 | Design Primer |
42 | NC_015891 | (TTA)4 | p3 | 78041 | 78052 | 12 | Design Primer |
43 | NC_015891 | (A)11 | p1 | 78437 | 78447 | 11 | Design Primer |
44 | NC_015891 | (TA)11 | p2 | 78817 | 78838 | 22 | Design Primer |
45 | NC_015891 | (AATA)4 | p4 | 84254 | 84269 | 16 | Design Primer |
46 | NC_015891 | (TTTA)3 | p4 | 87106 | 87117 | 12 | Design Primer |
47 | NC_015891 | (AAT)4ataaataataaatatatatttattatttaat(ATAA)3tataataaataaaattaaaataatat(TAA)4 | c | 101476 | 101568 | 93 | Design Primer |
48 | NC_015891 | (GCAAT)3 | p5 | 107060 | 107074 | 15 | Design Primer |
49 | NC_015891 | (T)11 | p1 | 107466 | 107476 | 11 | Design Primer |
50 | NC_015891 | (AAAAT)3 | p5 | 115261 | 115275 | 15 | Design Primer |
51 | NC_015891 | (A)11 | p1 | 119419 | 119429 | 11 | Design Primer |
52 | NC_015891 | (GAAT)3 | p4 | 120375 | 120386 | 12 | Design Primer |
53 | NC_015891 | (ATAA)3atattctaat(ATAA)3 | c | 123037 | 123070 | 34 | Design Primer |
54 | NC_015891 | (ATT)4 | p3 | 123916 | 123927 | 12 | Design Primer |
55 | NC_015891 | (AATA)3 | p4 | 128861 | 128872 | 12 | Design Primer |
56 | NC_015891 | (TTGA)3 | p4 | 131348 | 131359 | 12 | Design Primer |
57 | NC_015891 | (T)11 | p1 | 132851 | 132861 | 11 | Design Primer |
58 | NC_015891 | (CATT)3 | p4 | 139624 | 139635 | 12 | Design Primer |
59 | NC_015891 | (T)11 | p1 | 140582 | 140592 | 11 | Design Primer |
60 | NC_015891 | (ATTTT)3 | p5 | 144736 | 144750 | 15 | Design Primer |
61 | NC_015891 | (A)11 | p1 | 152535 | 152545 | 11 | Design Primer |
62 | NC_015891 | (CATTG)3 | p5 | 152936 | 152950 | 15 | Design Primer |
63 | NC_015891 | (TTA)4atattattttaattttatttattata(TTAT)3attaaataataaatatatatttattattta(TAT)4 | c | 158443 | 158534 | 92 | Design Primer |