Compound Compound Repeats of Hevea brasiliensis chloroplast
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| S.No. | Genome ID | SSR | SSR Type | Start | End | Tract Length | Primer Design |
|---|---|---|---|---|---|---|---|
| 1 | NC_015308 | (A)15ctttaacaaaacaatttacaaaacaaaagtttgagaagaacatatataaatttaaaattagtac(AT)7 | c | 451 | 543 | 93 | Design Primer |
| 2 | NC_015308 | (TAAA)3taataaatataaaatagaaattaaattactaaataatataaattct(A)10 | c | 9744 | 9811 | 68 | Design Primer |
| 3 | NC_015308 | (ATT)4cttttattattcttttattgttcttatttatatata(T)14 | c | 10907 | 10968 | 62 | Design Primer |
| 4 | NC_015308 | (ATAA)3aatatagaaataaaatatatagaataag(A)11 | c | 29452 | 29502 | 51 | Design Primer |
| 5 | NC_015308 | (T)19c(A)10 | c | 30123 | 30152 | 30 | Design Primer |
| 6 | NC_015308 | (TTA)6attagaaaattagaaattttctaattttcttattacaattgcatttctcttagtacattttattacattattatata(T)10 | c | 32130 | 32234 | 105 | Design Primer |
| 7 | NC_015308 | (ATTTTA)3gaaattatttattttaattttctatt(ATTTTA)3 | c | 54189 | 54250 | 62 | Design Primer |
| 8 | NC_015308 | (T)10atcggaatcaaaggaaaaatctgaagaatggatttttttctgacataagagtaaattgtagaacgaatcatgtaggtaac(T)12 | c | 62042 | 62143 | 102 | Design Primer |
| 9 | NC_015308 | (T)10ctaggtttatcataacttccttttcaattttatacgtataaattcgatttattacgtataaaaaaaattttaagtagtggacaaac(A)10 | c | 67170 | 67275 | 106 | Design Primer |
| 10 | NC_015308 | (A)16taggcttactccgcaattgaatcaaaattccaatccgaactcaaacgtagattgatgttttgttcaaaaaaaaatccg(A)11ttggattgtcgtgtcgtaagaaaaaaaaacgaattggggaagaagaaagtttgtttattatttcttttcg(A)10 | c | 72681 | 72865 | 185 | Design Primer |
| 11 | NC_015308 | (T)12c(A)13 | c | 75031 | 75056 | 26 | Design Primer |
| 12 | NC_015308 | (ATT)4actaaaat(A)11 | c | 76867 | 76897 | 31 | Design Primer |
| 13 | NC_015308 | (T)11aattgaaattatgttttaaaataaaaaaattatgtta(T)11atagattaatttttttattttttagataatcttg(T)12gttataaggttaaaacga(AT)7agaatagaattttctatgtataattttgatattataattttgatatcagatcgctaaaatttagaaatccaag(A)13 | c | 86723 | 86945 | 223 | Design Primer |
| 14 | NC_015308 | (T)16gttttgattaaac(A)17 | c | 87693 | 87738 | 46 | Design Primer |
| 15 | NC_015308 | (A)18t(A)10 | c | 118387 | 118415 | 29 | Design Primer |
| 16 | NC_015308 | (A)12(T)13 | c | 118542 | 118566 | 25 | Design Primer |
| 17 | NC_015308 | (T)13a(T)10 | c | 123244 | 123267 | 24 | Design Primer |
| 18 | NC_015308 | (T)10cgaaataattatggatagaattaaagatatattaatagattttcaatccaaattaagtcgcgacgcaattatc(ATCA)3 | c | 125074 | 125168 | 95 | Design Primer |
| 19 | NC_015308 | (T)12cgttcctattcttctttctg(A)12 | c | 126893 | 126936 | 44 | Design Primer |