Compound Repeats of Floydiella terrestris chloroplast
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| S.No. | Genome ID | SSR | SSR Type | Start | End | Tract Length | Primer Design |
|---|---|---|---|---|---|---|---|
| 1 | NC_014346 | (A)10ggcttttgcccgagctctgctcgggtgtaacccgaacctcgtttttgaaaaagggctccttttc(T)10 | c | 34772 | 34855 | 84 | Design Primer |
| 2 | NC_014346 | (T)11attaactttttcctttttaaaaatttttaaaaacgaaaagcctgttttataaaggcctt(A)10 | c | 54554 | 54633 | 80 | Design Primer |
| 3 | NC_014346 | (ATTTTG)4aaaaaagggcccctgctttttaaagagctacgtgagggttttttcatttaaataaagagggctttttaaaaggttgcacccctgcct(A)10 | c | 66043 | 66163 | 121 | Design Primer |
| 4 | NC_014346 | (A)10gctccgctttttaaagagggcctataaaattcagaggcctt(A)10 | c | 71242 | 71302 | 61 | Design Primer |
| 5 | NC_014346 | (T)11cagttttaaaacgttctatttaaagaaactac(TCTTTT)5 | c | 71760 | 71832 | 73 | Design Primer |
| 6 | NC_014346 | (AAAGAA)3aaagagctccgcccttcttttttacagaaaaaggttcgggcctctgcct(A)10 | c | 75257 | 75333 | 77 | Design Primer |
| 7 | NC_014346 | (TTTTCT)4tttaaaaaggctatcttcttttttttc(T)10 | c | 104267 | 104327 | 61 | Design Primer |
| 8 | NC_014346 | (CCTCTT)3(CTTTTT)3 | c | 167597 | 167632 | 36 | Design Primer |
| 9 | NC_014346 | (A)10gaaattttgcttt(A)12 | c | 171660 | 171694 | 35 | Design Primer |
| 10 | NC_014346 | (A)11gaaaaagggtgcgactcgaacctttttctgtaaaaaagaagggcggagctctttttctttttc(CTTTT)3tctttaaaaaggcctctgaatttaataggcccttaatctttttgggcggaactttttaataagggcttcattcattttaagggcctcgcc(A)11 | c | 211689 | 211878 | 190 | Design Primer |
| 11 | NC_014346 | (A)10gtctttaaaaacgggcttttctttttttaagaaaaagagttt(A)10cattccaaacggtgagagaaatcttcttttttcaaaaacaaggaaaaccctttaaaaaccggtttttcttttttagagattttgaaaaac(A)10 | c | 246224 | 246385 | 162 | Design Primer |
| 12 | NC_014346 | (A)10gaggatattttgaaaaaaatga(T)10 | c | 265196 | 265237 | 42 | Design Primer |
| 13 | NC_014346 | (A)10gcatttttagaaatccttttgaatgaaaagaaaatgtttctaaaagaaaaaaca(T)10 | c | 267365 | 267438 | 74 | Design Primer |
| 14 | NC_014346 | (A)11ctcactctagaaaccaaaattagcccttctttaaacagagggggcca(T)10 | c | 272441 | 272508 | 68 | Design Primer |
| 15 | NC_014346 | (A)10tagaatttcataaagaggctataaaacgcttttcgtaaaggggctaaaaacttggcttttgcaaaagccaaaaaagaagcttaagcttg(T)14 | c | 276558 | 276670 | 113 | Design Primer |
| 16 | NC_014346 | (T)14agaggaaaaacgaaaccatcccttgaatttaaaagaaaagtcattttaagacattc(CATT)3 | c | 290390 | 290471 | 82 | Design Primer |
| 17 | NC_014346 | (T)11caaaatgtcctttttttggctctttttaaaaaaggaaaaagagggacttaaaaaagtttttttattt(A)10 | c | 302776 | 302863 | 88 | Design Primer |
| 18 | NC_014346 | (A)10gattttaagcagtgtttttagcaaataatagaattttttgaattttttttaagtgcaaccctttaaaaagccctcttttaaaaggaaaaga(AAAAGG)4 | c | 322846 | 322970 | 125 | Design Primer |
| 19 | NC_014346 | (A)10cgttctctcttttttctttttat(A)10tggctttaaacgg(A)14 | c | 326505 | 326574 | 70 | Design Primer |
| 20 | NC_014346 | (A)10gaaaaagagctccacc(A)10 | c | 332806 | 332841 | 36 | Design Primer |
| 21 | NC_014346 | (T)11atttcaaaaaagagcccataaaaattc(T)11 | c | 357737 | 357785 | 49 | Design Primer |
| 22 | NC_014346 | (TCTTTT)3tttttaaaggcctcttaattctataggctctctttaaaaagcggagctctttataaagggcaatggcccttattctgtaaaaaagaagggcggagc(TCTTTT)4tctttaaaaaggcctcttaaattttatgagctcttctcttattaaaaggagggtttggctttttagaaagggtcttactctttctt(A)10 | c | 359921 | 360154 | 234 | Design Primer |
| 23 | NC_014346 | (GAAAAG)8aaaaagaaaaaggaaaaa(GAAAAG)5 | c | 366042 | 366137 | 96 | Design Primer |
| 24 | NC_014346 | (A)10ctttttgaagt(C)10 | c | 396484 | 396514 | 31 | Design Primer |
| 25 | NC_014346 | (T)10gaattc(A)11 | c | 406514 | 406540 | 27 | Design Primer |
| 26 | NC_014346 | (T)10aaagcagagagggccggaaaaattgaagaggcccgaaccaaaaaaaattagaaggtgagggcccctgctttttaaagaactccg(TTTTGA)5 | c | 424152 | 424275 | 124 | Design Primer |
| 27 | NC_014346 | (T)10caaaaaaaagagtgaacg(TTTC)3 | c | 452296 | 452335 | 40 | Design Primer |
| 28 | NC_014346 | (A)10cttttttaagaaaaaatctttttcaaagtcccctttttttacagaagaaaaaaggatgttttgaaaagctccttt(TC)6 | c | 493564 | 493660 | 97 | Design Primer |