All Repeats of Syntrichia ruralis chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | SSR | SSR Type | Start | End | Tract Length | Primer Design |
|---|---|---|---|---|---|---|---|
| 1 | NC_012052 | (A)14 | p1 | 529 | 542 | 14 | Design Primer |
| 2 | NC_012052 | (TTA)4 | p3 | 4196 | 4207 | 12 | Design Primer |
| 3 | NC_012052 | (TA)8 | p2 | 7052 | 7067 | 16 | Design Primer |
| 4 | NC_012052 | (AT)6 | p2 | 9290 | 9301 | 12 | Design Primer |
| 5 | NC_012052 | (AATAA)3 | p5 | 9681 | 9695 | 15 | Design Primer |
| 6 | NC_012052 | (TA)6 | p2 | 10656 | 10667 | 12 | Design Primer |
| 7 | NC_012052 | (A)13 | p1 | 12985 | 12997 | 13 | Design Primer |
| 8 | NC_012052 | (T)12 | p1 | 14274 | 14285 | 12 | Design Primer |
| 9 | NC_012052 | (AATA)3 | p4 | 14604 | 14615 | 12 | Design Primer |
| 10 | NC_012052 | (AT)15 | p2 | 15231 | 15260 | 30 | Design Primer |
| 11 | NC_012052 | (ATA)4 | p3 | 16355 | 16366 | 12 | Design Primer |
| 12 | NC_012052 | (AT)7a(AT)7(TA)8 | c | 16741 | 16785 | 45 | Design Primer |
| 13 | NC_012052 | (ATAA)3 | p4 | 17094 | 17105 | 12 | Design Primer |
| 14 | NC_012052 | (AATA)3 | p4 | 17942 | 17953 | 12 | Design Primer |
| 15 | NC_012052 | (CAAA)3gtgtagaattaaatcgtactagcctctattggggtttgttattgatttttgtattagctgttttattttctaattattttt(TTAA)3 | c | 18624 | 18728 | 105 | Design Primer |
| 16 | NC_012052 | (T)12aaattgtttgaaaaaaataatgacatttttaataattctttagttttaatgttatatatatgttggttatc(T)12 | c | 19437 | 19531 | 95 | Design Primer |
| 17 | NC_012052 | (T)12 | p1 | 22006 | 22017 | 12 | Design Primer |
| 18 | NC_012052 | (A)12 | p1 | 23844 | 23855 | 12 | Design Primer |
| 19 | NC_012052 | (A)12 | p1 | 27114 | 27125 | 12 | Design Primer |
| 20 | NC_012052 | (TA)6gaaaa(T)14 | c | 32766 | 32796 | 31 | Design Primer |
| 21 | NC_012052 | (TTA)4 | p3 | 33050 | 33061 | 12 | Design Primer |
| 22 | NC_012052 | (TTA)5 | p3 | 33278 | 33292 | 15 | Design Primer |
| 23 | NC_012052 | (G)14aaatttatgaaaaataaaaaataattgt(TTAA)3 | c | 41448 | 41501 | 54 | Design Primer |
| 24 | NC_012052 | (AT)7 | p2 | 41884 | 41897 | 14 | Design Primer |
| 25 | NC_012052 | (ATA)4 | p3 | 44894 | 44905 | 12 | Design Primer |
| 26 | NC_012052 | (CTTTT)3tatttagatataacatgtccctttaactcaaatatttttttgtttttttttttataaagtttatt(ATA)4 | c | 45372 | 45463 | 92 | Design Primer |
| 27 | NC_012052 | (AT)7 | p2 | 45587 | 45600 | 14 | Design Primer |
| 28 | NC_012052 | (A)12 | p1 | 46073 | 46084 | 12 | Design Primer |
| 29 | NC_012052 | (T)13 | p1 | 48277 | 48289 | 13 | Design Primer |
| 30 | NC_012052 | (TAAA)3 | p4 | 49197 | 49208 | 12 | Design Primer |
| 31 | NC_012052 | (TTA)5 | p3 | 49829 | 49843 | 15 | Design Primer |
| 32 | NC_012052 | (T)13 | p1 | 51714 | 51726 | 13 | Design Primer |
| 33 | NC_012052 | (T)12 | p1 | 51996 | 52007 | 12 | Design Primer |
| 34 | NC_012052 | (T)12 | p1 | 52111 | 52122 | 12 | Design Primer |
| 35 | NC_012052 | (T)12aaatcaaaaaatttaaaaagataataattcgaaaaaataaaa(T)13 | c | 52255 | 52321 | 67 | Design Primer |
| 36 | NC_012052 | (AAT)4 | p3 | 54302 | 54313 | 12 | Design Primer |
| 37 | NC_012052 | (A)12 | p1 | 55314 | 55325 | 12 | Design Primer |
| 38 | NC_012052 | (T)19 | p1 | 56186 | 56204 | 19 | Design Primer |
| 39 | NC_012052 | (A)14 | p1 | 57185 | 57198 | 14 | Design Primer |
| 40 | NC_012052 | (TTTA)3 | p4 | 59168 | 59179 | 12 | Design Primer |
| 41 | NC_012052 | (AT)8 | p2 | 59781 | 59796 | 16 | Design Primer |
| 42 | NC_012052 | (T)13 | p1 | 62108 | 62120 | 13 | Design Primer |
| 43 | NC_012052 | (TAT)4 | p3 | 69344 | 69355 | 12 | Design Primer |
| 44 | NC_012052 | (TATT)3 | p4 | 70075 | 70086 | 12 | Design Primer |
| 45 | NC_012052 | (T)12 | p1 | 74052 | 74063 | 12 | Design Primer |
| 46 | NC_012052 | (TCTTT)3 | p5 | 77176 | 77190 | 15 | Design Primer |
| 47 | NC_012052 | (T)18 | p1 | 77540 | 77557 | 18 | Design Primer |
| 48 | NC_012052 | (AAAT)3 | p4 | 78376 | 78387 | 12 | Design Primer |
| 49 | NC_012052 | (T)13aatttgattttttgataa(T)15 | c | 78612 | 78657 | 46 | Design Primer |
| 50 | NC_012052 | (ATA)5 | p3 | 79505 | 79519 | 15 | Design Primer |
| 51 | NC_012052 | (AAT)4 | p3 | 83068 | 83079 | 12 | Design Primer |
| 52 | NC_012052 | (AATAA)3 | p5 | 84020 | 84034 | 15 | Design Primer |
| 53 | NC_012052 | (AATA)3 | p4 | 84716 | 84727 | 12 | Design Primer |
| 54 | NC_012052 | (AGGT)3 | p4 | 90921 | 90932 | 12 | Design Primer |
| 55 | NC_012052 | (ATA)4 | p3 | 101589 | 101600 | 12 | Design Primer |
| 56 | NC_012052 | (A)15 | p1 | 103733 | 103747 | 15 | Design Primer |
| 57 | NC_012052 | (ATT)5 | p3 | 104282 | 104296 | 15 | Design Primer |
| 58 | NC_012052 | (TATT)3 | p4 | 108482 | 108493 | 12 | Design Primer |
| 59 | NC_012052 | (TAA)4 | p3 | 110305 | 110316 | 12 | Design Primer |
| 60 | NC_012052 | (TTA)5 | p3 | 112600 | 112614 | 15 | Design Primer |
| 61 | NC_012052 | (CTAC)3 | p4 | 115775 | 115786 | 12 | Design Primer |
| 62 | NC_012052 | (TTTA)3 | p4 | 121980 | 121991 | 12 | Design Primer |