ChloroMitoSSRDB 2.00 Webserver cum Database of Cholorplast and Mitochondrial Microsatellites

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Compound Compound Repeats of Trifolium subterraneum chloroplast

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S.No.Genome IDSSRSSR TypeStartEndTract LengthPrimer Design
1NC_011828(A)13taagacatgtatttggatattccccgtccacttaacaaaataaattgcattttttatttgacataaatgaatagtggaggggaactttccg(A)12c2083520950116Design Primer
2NC_011828(AT)8aataataaaaggaggttatttatttaatttgttcgacagaaacggaactacccaa(T)12c(A)12c231472324296Design Primer
3NC_011828(A)13taaagaacagaaacgaaagtccgcggaaaaaacaatatgta(T)15c289532902169Design Primer
4NC_011828(A)13tggatctattttatttgtcaaaatttttcttttctaaaaatctaaaaacgggtcaactatgaatagtaaatgtgtaaatga(ATT)4c3775837863106Design Primer
5NC_011828(T)12gaaattacttcatttcttataaacttagtatctcttataaacttagtatcaaaggaaacataataggaaatagaagagaatctattctctttctctgtcg(T)12c3968939812124Design Primer
6NC_011828(T)12agttttgaatatttcatttctattatttattagatttaatttatataaattatatgtatttatcccgatatcctgaatatttta(TAT)4(ATA)5c6358463706123Design Primer
7NC_011828(TTTA)3aattttagaatat(TA)8c843538439341Design Primer
8NC_011828(AT)6acatatacaacacattg(A)13taaaaacatttg(A)13c10423610430267Design Primer
9NC_011828(A)12tattctatatat(ATAG)3c10963210966736Design Primer
10NC_011828(T)12caaaattttttgctttctctccgaagaatgtatctttctcctaagactgagatcggt(A)12c11740911748981Design Primer
11NC_011828(T)12atttttgcattcggta(CTTT)3c12001112005040Design Primer
12NC_011828(T)18c(A)15c13279313282634Design Primer