All Repeats of Populus trichocarpa chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | SSR | SSR Type | Start | End | Tract Length | Primer Design |
|---|---|---|---|---|---|---|---|
| 1 | NC_009143 | (TGAA)3 | p4 | 1566 | 1577 | 12 | Design Primer |
| 2 | NC_009143 | (A)16 | p1 | 4729 | 4744 | 16 | Design Primer |
| 3 | NC_009143 | (TAT)4attactcttaatatattagtattctaattagtattatttagtattatagtaatttactatttaattactattaattact(ATTA)4ct(ATTA)4 | c | 7091 | 7215 | 125 | Design Primer |
| 4 | NC_009143 | (T)12 | p1 | 7637 | 7648 | 12 | Design Primer |
| 5 | NC_009143 | (T)12 | p1 | 10457 | 10468 | 12 | Design Primer |
| 6 | NC_009143 | (T)13ctagattattttattttata(T)12 | c | 11832 | 11876 | 45 | Design Primer |
| 7 | NC_009143 | (GAAA)3 | p4 | 14230 | 14241 | 12 | Design Primer |
| 8 | NC_009143 | (T)14 | p1 | 17481 | 17494 | 14 | Design Primer |
| 9 | NC_009143 | (A)16 | p1 | 21942 | 21957 | 16 | Design Primer |
| 10 | NC_009143 | (T)12 | p1 | 25214 | 25225 | 12 | Design Primer |
| 11 | NC_009143 | (A)14 | p1 | 26323 | 26336 | 14 | Design Primer |
| 12 | NC_009143 | (T)13 | p1 | 27388 | 27400 | 13 | Design Primer |
| 13 | NC_009143 | (TA)6 | p2 | 35656 | 35667 | 12 | Design Primer |
| 14 | NC_009143 | (TAA)4ttaataatat(TAA)4ttaataatat(TAA)5ttaataatattaataat(TAA)4 | c | 43015 | 43102 | 88 | Design Primer |
| 15 | NC_009143 | (A)13 | p1 | 46470 | 46482 | 13 | Design Primer |
| 16 | NC_009143 | (T)14 | p1 | 47958 | 47971 | 14 | Design Primer |
| 17 | NC_009143 | (T)16 | p1 | 48346 | 48361 | 16 | Design Primer |
| 18 | NC_009143 | (T)12 | p1 | 50127 | 50138 | 12 | Design Primer |
| 19 | NC_009143 | (A)13 | p1 | 50845 | 50857 | 13 | Design Primer |
| 20 | NC_009143 | (A)15 | p1 | 51587 | 51601 | 15 | Design Primer |
| 21 | NC_009143 | (T)13 | p1 | 55349 | 55361 | 13 | Design Primer |
| 22 | NC_009143 | (AATA)3 | p4 | 59962 | 59973 | 12 | Design Primer |
| 23 | NC_009143 | (T)13 | p1 | 61151 | 61163 | 13 | Design Primer |
| 24 | NC_009143 | (A)15 | p1 | 63454 | 63468 | 15 | Design Primer |
| 25 | NC_009143 | (AT)7 | p2 | 63977 | 63990 | 14 | Design Primer |
| 26 | NC_009143 | (T)12attttaatatggaaagaaaaaaaaaagtaaaagatattataaagaaaaatagagggttacttttcgttctaaaatctaaaaaaaaaatggattcgatac(AAAT)3 | c | 65804 | 65926 | 123 | Design Primer |
| 27 | NC_009143 | (A)14gaa(T)12 | c | 66486 | 66514 | 29 | Design Primer |
| 28 | NC_009143 | (T)13 | p1 | 71335 | 71347 | 13 | Design Primer |
| 29 | NC_009143 | (TTTC)3 | p4 | 75809 | 75820 | 12 | Design Primer |
| 30 | NC_009143 | (A)13 | p1 | 81393 | 81405 | 13 | Design Primer |
| 31 | NC_009143 | (T)13 | p1 | 81629 | 81641 | 13 | Design Primer |
| 32 | NC_009143 | (A)14 | p1 | 82248 | 82261 | 14 | Design Primer |
| 33 | NC_009143 | (T)12 | p1 | 83785 | 83796 | 12 | Design Primer |
| 34 | NC_009143 | (T)16 | p1 | 85643 | 85658 | 16 | Design Primer |
| 35 | NC_009143 | (ATATAG)3 | p6 | 98888 | 98905 | 18 | Design Primer |
| 36 | NC_009143 | (TTAT)3 | p4 | 100638 | 100649 | 12 | Design Primer |
| 37 | NC_009143 | (AAAGA)3 | p5 | 105211 | 105225 | 15 | Design Primer |
| 38 | NC_009143 | (A)12 | p1 | 109702 | 109713 | 12 | Design Primer |
| 39 | NC_009143 | (T)14 | p1 | 110121 | 110134 | 14 | Design Primer |
| 40 | NC_009143 | (TTTCTA)3 | p6 | 110983 | 111000 | 18 | Design Primer |
| 41 | NC_009143 | (A)13 | p1 | 115198 | 115210 | 13 | Design Primer |
| 42 | NC_009143 | (A)12ttca(T)12 | c | 115622 | 115649 | 28 | Design Primer |
| 43 | NC_009143 | (AATA)3 | p4 | 117369 | 117380 | 12 | Design Primer |
| 44 | NC_009143 | (A)12 | p1 | 122450 | 122461 | 12 | Design Primer |
| 45 | NC_009143 | (AT)8aaatgatagtaaaatgctcggtagcattacagta(AT)7 | c | 122689 | 122752 | 64 | Design Primer |
| 46 | NC_009143 | (A)16 | p1 | 125411 | 125426 | 16 | Design Primer |
| 47 | NC_009143 | (CATT)3 | p4 | 127316 | 127327 | 12 | Design Primer |
| 48 | NC_009143 | (ATAGAA)3 | p6 | 131162 | 131179 | 18 | Design Primer |
| 49 | NC_009143 | (A)14 | p1 | 132029 | 132042 | 14 | Design Primer |
| 50 | NC_009143 | (T)12 | p1 | 132450 | 132461 | 12 | Design Primer |
| 51 | NC_009143 | (TTCTT)3 | p5 | 136937 | 136951 | 15 | Design Primer |
| 52 | NC_009143 | (AAAT)3 | p4 | 141512 | 141523 | 12 | Design Primer |
| 53 | NC_009143 | (ATCTAT)3 | p6 | 143256 | 143273 | 18 | Design Primer |
| 54 | NC_009143 | (A)16 | p1 | 156505 | 156520 | 16 | Design Primer |