ChloroMitoSSRDB 2.0 - Database of Microsatellites from Chloroplast & Mitochondrial Genomes

All Repeats of Citrus sinensis chloroplast

Click on Table Heading To Sort Results Accordingly

S.No.	Genome ID	SSR	SSR Type	Start	End	Tract Length	Primer Design
1	NC_008334	(A)14	p1	368	381	14	Design Primer
2	NC_008334	(ATT)6	p3	1743	1760	18	Design Primer
3	NC_008334	(A)12	p1	4486	4497	12	Design Primer
4	NC_008334	(TAAA)3(A)13*	c*	6850	6871	22	Design Primer
5	NC_008334	(A)13	p1	7376	7388	13	Design Primer
6	NC_008334	(A)12	p1	8129	8140	12	Design Primer
7	NC_008334	(A)15	p1	8830	8844	15	Design Primer
8	NC_008334	(AAAT)4(A)12	c	10615	10642	28	Design Primer
9	NC_008334	(ATT)4	p3	10785	10796	12	Design Primer
10	NC_008334	(T)13	p1	10909	10921	13	Design Primer
11	NC_008334	(A)17	p1	12515	12531	17	Design Primer
12	NC_008334	(A)13	p1	13932	13944	13	Design Primer
13	NC_008334	(TTTC)3	p4	14886	14897	12	Design Primer
14	NC_008334	(T)12	p1	15256	15267	12	Design Primer
15	NC_008334	(TAA)4	p3	30762	30773	12	Design Primer
16	NC_008334	(AAAT)3	p4	31161	31172	12	Design Primer
17	NC_008334	(A)13	p1	32137	32149	13	Design Primer
18	NC_008334	(AAAT)3	p4	33232	33243	12	Design Primer
19	NC_008334	(T)23	p1	34012	34034	23	Design Primer
20	NC_008334	(CTT)4	p3	38103	38114	12	Design Primer
21	NC_008334	(AAT)4	p3	39356	39367	12	Design Primer
22	NC_008334	(A)18	p1	39867	39884	18	Design Primer
23	NC_008334	(TAAA)3	p4	45792	45803	12	Design Primer
24	NC_008334	(T)12	p1	46718	46729	12	Design Primer
25	NC_008334	(T)16ctatcccgaattg(TCTT)3	c	47636	47676	41	Design Primer
26	NC_008334	(A)13tagaccgatccgttgattcgttccaactcattgattaaatcaggtagaaatatcag(A)15	c	47956	48039	84	Design Primer
27	NC_008334	(T)12	p1	49924	49935	12	Design Primer
28	NC_008334	(ATAC)3	p4	51873	51884	12	Design Primer
29	NC_008334	(T)17	p1	53452	53468	17	Design Primer
30	NC_008334	(ATT)4	p3	54513	54524	12	Design Primer
31	NC_008334	(ATT)4	p3	54791	54802	12	Design Primer
32	NC_008334	(T)13	p1	54912	54924	13	Design Primer
33	NC_008334	(T)14	p1	57888	57901	14	Design Primer
34	NC_008334	(TTAG)3	p4	62183	62194	12	Design Primer
35	NC_008334	(T)17	p1	69015	69031	17	Design Primer
36	NC_008334	(A)17	p1	70635	70651	17	Design Primer
37	NC_008334	(ATA)4	p3	70891	70902	12	Design Primer
38	NC_008334	(AAAT)3	p4	72053	72064	12	Design Primer
39	NC_008334	(A)14	p1	72551	72564	14	Design Primer
40	NC_008334	(TTC)4	p3	73739	73750	12	Design Primer
41	NC_008334	(T)13	p1	74595	74607	13	Design Primer
42	NC_008334	(A)12	p1	74824	74835	12	Design Primer
43	NC_008334	(T)14	p1	81067	81080	14	Design Primer
44	NC_008334	(T)14	p1	82054	82067	14	Design Primer
45	NC_008334	(TAT)4	p3	83939	83950	12	Design Primer
46	NC_008334	(A)13	p1	86718	86730	13	Design Primer
47	NC_008334	(AAG)4	p3	97941	97952	12	Design Primer
48	NC_008334	(T)14(TTTTA)3*	c*	103383	103407	25	Design Primer
49	NC_008334	(T)13	p1	107323	107335	13	Design Primer
50	NC_008334	(A)12	p1	112413	112424	12	Design Primer
51	NC_008334	(A)12	p1	114585	114596	12	Design Primer
52	NC_008334	(ATTT)5	p4	117762	117781	20	Design Primer
53	NC_008334	(AAAT)3(A)12gtcc(T)12	c	118310	118349	40	Design Primer
54	NC_008334	(T)16	p1	119083	119098	16	Design Primer
55	NC_008334	(AAT)4	p3	122867	122878	12	Design Primer
56	NC_008334	(T)12	p1	133278	133289	12	Design Primer
57	NC_008334	(T)12	p1	135450	135461	12	Design Primer
58	NC_008334	(A)13	p1	140539	140551	13	Design Primer
59	NC_008334	(AATAA)3(A)14*	c*	144465	144491	27	Design Primer
60	NC_008334	(CTT)4	p3	149922	149933	12	Design Primer

ChloroMitoSSRDB 2.00 Webserver cum Database of Cholorplast and Mitochondrial Microsatellites

All Repeats of Citrus sinensis chloroplast