Penta-nucleotide Repeats of Zea mays subsp. parviglumis mitochondrion
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | SSR | SSR Type | Start | End | Tract Length | Primer Design |
|---|---|---|---|---|---|---|---|
| 1 | NC_008332 | (ATTTC)3 | p5 | 5257 | 5271 | 15 | Design Primer |
| 2 | NC_008332 | (ACGAG)3 | p5 | 5400 | 5414 | 15 | Design Primer |
| 3 | NC_008332 | (TGGAT)3 | p5 | 18298 | 18312 | 15 | Design Primer |
| 4 | NC_008332 | (ATAAC)3 | p5 | 22790 | 22804 | 15 | Design Primer |
| 5 | NC_008332 | (TTAGT)3 | p5 | 23465 | 23479 | 15 | Design Primer |
| 6 | NC_008332 | (TAAGT)5 | p5 | 34131 | 34155 | 25 | Design Primer |
| 7 | NC_008332 | (TTTAG)4 | p5 | 49483 | 49502 | 20 | Design Primer |
| 8 | NC_008332 | (TCCTG)3 | p5 | 72097 | 72111 | 15 | Design Primer |
| 9 | NC_008332 | (TATAT)7 | p5 | 77313 | 77347 | 35 | Design Primer |
| 10 | NC_008332 | (ATCAA)3 | p5 | 81052 | 81066 | 15 | Design Primer |
| 11 | NC_008332 | (TTAGT)3 | p5 | 90438 | 90452 | 15 | Design Primer |
| 12 | NC_008332 | (ATTTC)3 | p5 | 94155 | 94169 | 15 | Design Primer |
| 13 | NC_008332 | (ACGAG)3 | p5 | 94298 | 94312 | 15 | Design Primer |
| 14 | NC_008332 | (ACTAC)3 | p5 | 109932 | 109946 | 15 | Design Primer |
| 15 | NC_008332 | (TTGGA)3 | p5 | 116645 | 116659 | 15 | Design Primer |
| 16 | NC_008332 | (ACTTT)3 | p5 | 124291 | 124305 | 15 | Design Primer |
| 17 | NC_008332 | (AATTC)3 | p5 | 142929 | 142943 | 15 | Design Primer |
| 18 | NC_008332 | (TACTT)3 | p5 | 148940 | 148954 | 15 | Design Primer |
| 19 | NC_008332 | (ATAGT)3 | p5 | 149468 | 149482 | 15 | Design Primer |
| 20 | NC_008332 | (ACCTT)4 | p5 | 157720 | 157739 | 20 | Design Primer |
| 21 | NC_008332 | (TCATA)6 | p5 | 170620 | 170649 | 30 | Design Primer |
| 22 | NC_008332 | (ACTAC)3 | p5 | 195183 | 195197 | 15 | Design Primer |
| 23 | NC_008332 | (TTCTT)3 | p5 | 203630 | 203644 | 15 | Design Primer |
| 24 | NC_008332 | (TTAAG)3 | p5 | 214152 | 214166 | 15 | Design Primer |
| 25 | NC_008332 | (ATCTT)5 | p5 | 223670 | 223694 | 25 | Design Primer |
| 26 | NC_008332 | (TACTA)6 | p5 | 230187 | 230216 | 30 | Design Primer |
| 27 | NC_008332 | (ACTTT)3 | p5 | 246880 | 246894 | 15 | Design Primer |
| 28 | NC_008332 | (TATTA)3 | p5 | 247524 | 247538 | 15 | Design Primer |
| 29 | NC_008332 | (GCAAA)3 | p5 | 270750 | 270764 | 15 | Design Primer |
| 30 | NC_008332 | (CTATA)3 | p5 | 284356 | 284370 | 15 | Design Primer |
| 31 | NC_008332 | (TAAGT)3 | p5 | 287119 | 287133 | 15 | Design Primer |
| 32 | NC_008332 | (TGGAT)3 | p5 | 290045 | 290059 | 15 | Design Primer |
| 33 | NC_008332 | (CTATA)3 | p5 | 290835 | 290849 | 15 | Design Primer |
| 34 | NC_008332 | (TCAAA)3 | p5 | 297248 | 297262 | 15 | Design Primer |
| 35 | NC_008332 | (CTTTA)3 | p5 | 298180 | 298194 | 15 | Design Primer |
| 36 | NC_008332 | (GAAAT)3 | p5 | 300156 | 300170 | 15 | Design Primer |
| 37 | NC_008332 | (ACTAA)3 | p5 | 301717 | 301731 | 15 | Design Primer |
| 38 | NC_008332 | (TACTA)4 | p5 | 302426 | 302445 | 20 | Design Primer |
| 39 | NC_008332 | (TATAG)3 | p5 | 322316 | 322330 | 15 | Design Primer |
| 40 | NC_008332 | (ACTAA)3 | p5 | 331791 | 331805 | 15 | Design Primer |
| 41 | NC_008332 | (CTATA)3 | p5 | 332778 | 332792 | 15 | Design Primer |
| 42 | NC_008332 | (GAAAG)3 | p5 | 339634 | 339648 | 15 | Design Primer |
| 43 | NC_008332 | (TCTAT)3 | p5 | 360023 | 360037 | 15 | Design Primer |
| 44 | NC_008332 | (TATAG)4 | p5 | 364266 | 364285 | 20 | Design Primer |
| 45 | NC_008332 | (CCTGG)3 | p5 | 364997 | 365011 | 15 | Design Primer |
| 46 | NC_008332 | (ATAGT)4 | p5 | 375685 | 375704 | 20 | Design Primer |
| 47 | NC_008332 | (ATTCC)3 | p5 | 379942 | 379956 | 15 | Design Primer |
| 48 | NC_008332 | (TATAG)3 | p5 | 395015 | 395029 | 15 | Design Primer |
| 49 | NC_008332 | (GTAAA)5 | p5 | 396014 | 396038 | 25 | Design Primer |
| 50 | NC_008332 | (CTCCA)3 | p5 | 399532 | 399546 | 15 | Design Primer |
| 51 | NC_008332 | (ATAGG)10 | p5 | 407339 | 407388 | 50 | Design Primer |
| 52 | NC_008332 | (TATAG)5 | p5 | 411505 | 411529 | 25 | Design Primer |
| 53 | NC_008332 | (GTTAG)3 | p5 | 425244 | 425258 | 15 | Design Primer |
| 54 | NC_008332 | (GTAAA)3 | p5 | 432460 | 432474 | 15 | Design Primer |
| 55 | NC_008332 | (TCAAA)3 | p5 | 443901 | 443915 | 15 | Design Primer |
| 56 | NC_008332 | (CTTTA)3 | p5 | 444833 | 444847 | 15 | Design Primer |
| 57 | NC_008332 | (GAAAT)3 | p5 | 446809 | 446823 | 15 | Design Primer |
| 58 | NC_008332 | (ACTAA)3 | p5 | 448370 | 448384 | 15 | Design Primer |
| 59 | NC_008332 | (TACTA)4 | p5 | 449079 | 449098 | 20 | Design Primer |
| 60 | NC_008332 | (TATAG)3 | p5 | 468969 | 468983 | 15 | Design Primer |
| 61 | NC_008332 | (ACTAA)3 | p5 | 478444 | 478458 | 15 | Design Primer |
| 62 | NC_008332 | (CTATA)3 | p5 | 479431 | 479445 | 15 | Design Primer |
| 63 | NC_008332 | (GAAAG)3 | p5 | 486287 | 486301 | 15 | Design Primer |
| 64 | NC_008332 | (TTGAA)3 | p5 | 494457 | 494471 | 15 | Design Primer |
| 65 | NC_008332 | (TCTAC)3 | p5 | 502250 | 502264 | 15 | Design Primer |
| 66 | NC_008332 | (TAGTA)4 | p5 | 509998 | 510017 | 20 | Design Primer |
| 67 | NC_008332 | (GCAGG)4 | p5 | 510204 | 510223 | 20 | Design Primer |
| 68 | NC_008332 | (CTACG)3 | p5 | 519654 | 519668 | 15 | Design Primer |
| 69 | NC_008332 | (TTTAC)3 | p5 | 531016 | 531030 | 15 | Design Primer |
| 70 | NC_008332 | (CTAAC)3 | p5 | 538232 | 538246 | 15 | Design Primer |
| 71 | NC_008332 | (TACTA)5 | p5 | 551959 | 551983 | 25 | Design Primer |
| 72 | NC_008332 | (CCTAT)10 | p5 | 556102 | 556151 | 50 | Design Primer |
| 73 | NC_008332 | (TGGAG)3 | p5 | 563944 | 563958 | 15 | Design Primer |
| 74 | NC_008332 | (CTTTA)5 | p5 | 567451 | 567475 | 25 | Design Primer |
| 75 | NC_008332 | (CTATA)3 | p5 | 568461 | 568475 | 15 | Design Primer |
| 76 | NC_008332 | (ACTAT)4 | p5 | 580456 | 580475 | 20 | Design Primer |
| 77 | NC_008332 | (TATAG)3 | p5 | 580601 | 580615 | 15 | Design Primer |
| 78 | NC_008332 | (CCTTT)3 | p5 | 581989 | 582003 | 15 | Design Primer |
| 79 | NC_008332 | (ACTAC)3 | p5 | 591655 | 591669 | 15 | Design Primer |
| 80 | NC_008332 | (TAATA)3 | p5 | 609896 | 609910 | 15 | Design Primer |
| 81 | NC_008332 | (AAAGT)3 | p5 | 610540 | 610554 | 15 | Design Primer |
| 82 | NC_008332 | (CGGGG)3 | p5 | 615292 | 615306 | 15 | Design Primer |
| 83 | NC_008332 | (ATAGG)5 | p5 | 636194 | 636218 | 25 | Design Primer |
| 84 | NC_008332 | (CGGCC)3 | p5 | 640243 | 640257 | 15 | Design Primer |
| 85 | NC_008332 | (GATAT)3 | p5 | 652854 | 652868 | 15 | Design Primer |
| 86 | NC_008332 | (ATACT)3 | p5 | 653093 | 653107 | 15 | Design Primer |
| 87 | NC_008332 | (AAGTA)4 | p5 | 660323 | 660342 | 20 | Design Primer |