All Repeats of Zea perennis mitochondrion
Click on Table Heading To Sort Results Accordingly
S.No. | Genome ID | SSR | SSR Type | Start | End | Tract Length | Primer Design |
---|---|---|---|---|---|---|---|
1 | NC_008331 | (ATG)4 | p3 | 1997 | 2008 | 12 | Design Primer |
2 | NC_008331 | (CAAG)3 | p4 | 7446 | 7457 | 12 | Design Primer |
3 | NC_008331 | (T)13acttattaaattctctgtcttgctaaacacaaatccttcttttcttgtatagacg(A)10 | c | 8988 | 9065 | 78 | Design Primer |
4 | NC_008331 | (CTTG)3 | p4 | 15511 | 15522 | 12 | Design Primer |
5 | NC_008331 | (A)10 | p1 | 16010 | 16019 | 10 | Design Primer |
6 | NC_008331 | (TAAGTG)3aacgaaatgctga(TTGC)3 | c | 18292 | 18334 | 43 | Design Primer |
7 | NC_008331 | (TTAT)3 | p4 | 20286 | 20297 | 12 | Design Primer |
8 | NC_008331 | (TAC)4 | p3 | 26518 | 26529 | 12 | Design Primer |
9 | NC_008331 | (A)10 | p1 | 30232 | 30241 | 10 | Design Primer |
10 | NC_008331 | (AGT)10 | p3 | 33030 | 33059 | 30 | Design Primer |
11 | NC_008331 | (TCT)4 | p3 | 35595 | 35606 | 12 | Design Primer |
12 | NC_008331 | (TTTC)4 | p4 | 37256 | 37271 | 16 | Design Primer |
13 | NC_008331 | (CCAGAA)3 | p6 | 38484 | 38501 | 18 | Design Primer |
14 | NC_008331 | (CTTTA)19 | p5 | 38826 | 38920 | 95 | Design Primer |
15 | NC_008331 | (AT)6 | p2 | 41356 | 41367 | 12 | Design Primer |
16 | NC_008331 | (AGT)4 | p3 | 44147 | 44158 | 12 | Design Primer |
17 | NC_008331 | (GTATA)3 | p5 | 47454 | 47468 | 15 | Design Primer |
18 | NC_008331 | (AAAGCT)3 | p6 | 48678 | 48695 | 18 | Design Primer |
19 | NC_008331 | (ATAGT)3 | p5 | 51768 | 51782 | 15 | Design Primer |
20 | NC_008331 | (TGGAA)3 | p5 | 54911 | 54925 | 15 | Design Primer |
21 | NC_008331 | (AGGC)3 | p4 | 56900 | 56911 | 12 | Design Primer |
22 | NC_008331 | (GCGTA)3 | p5 | 58239 | 58253 | 15 | Design Primer |
23 | NC_008331 | (CTAGG)3 | p5 | 60012 | 60026 | 15 | Design Primer |
24 | NC_008331 | (TACTT)3 | p5 | 61778 | 61792 | 15 | Design Primer |
25 | NC_008331 | (CAAG)3 | p4 | 62476 | 62487 | 12 | Design Primer |
26 | NC_008331 | (TTC)4 | p3 | 64487 | 64498 | 12 | Design Primer |
27 | NC_008331 | (TACTA)5agatgtttcagttcgctaggttgtctct(TGCC)3 | c | 67821 | 67885 | 65 | Design Primer |
28 | NC_008331 | (GAT)4 | p3 | 77004 | 77015 | 12 | Design Primer |
29 | NC_008331 | (TTTGA)8 | p5 | 82692 | 82731 | 40 | Design Primer |
30 | NC_008331 | (TTC)4 | p3 | 83436 | 83447 | 12 | Design Primer |
31 | NC_008331 | (A)11 | p1 | 86758 | 86768 | 11 | Design Primer |
32 | NC_008331 | (TATAG)3 | p5 | 89119 | 89133 | 15 | Design Primer |
33 | NC_008331 | (ATTC)3 | p4 | 89535 | 89546 | 12 | Design Primer |
34 | NC_008331 | (ATAGA)3 | p5 | 90473 | 90487 | 15 | Design Primer |
35 | NC_008331 | (TAGA)3 | p4 | 94545 | 94556 | 12 | Design Primer |
36 | NC_008331 | (TATAT)11 | p5 | 98883 | 98937 | 55 | Design Primer |
37 | NC_008331 | (ATT)4 | p3 | 100078 | 100089 | 12 | Design Primer |
38 | NC_008331 | (TCTTTA)3 | p6 | 106085 | 106102 | 18 | Design Primer |
39 | NC_008331 | (TTCT)4 | p4 | 109944 | 109959 | 16 | Design Primer |
40 | NC_008331 | (TTGGA)3 | p5 | 111428 | 111442 | 15 | Design Primer |
41 | NC_008331 | (A)10 | p1 | 112940 | 112949 | 10 | Design Primer |
42 | NC_008331 | (ACTTAG)3 | p6 | 116457 | 116474 | 18 | Design Primer |
43 | NC_008331 | (TATAGA)4 | p6 | 117344 | 117367 | 24 | Design Primer |
44 | NC_008331 | (ACTTT)13 | p5 | 119072 | 119136 | 65 | Design Primer |
45 | NC_008331 | (GAAA)3 | p4 | 119432 | 119443 | 12 | Design Primer |
46 | NC_008331 | (TTGC)3 | p4 | 122357 | 122368 | 12 | Design Primer |
47 | NC_008331 | (GGCC)3 | p4 | 123842 | 123853 | 12 | Design Primer |
48 | NC_008331 | (TAGTAC)6 | p6 | 124300 | 124335 | 36 | Design Primer |
49 | NC_008331 | (CCAC)3 | p4 | 125502 | 125513 | 12 | Design Primer |
50 | NC_008331 | (TATTAC)5t(ATGGAA)8 | c | 125976 | 126054 | 79 | Design Primer |
51 | NC_008331 | (TTAA)3 | p4 | 126482 | 126493 | 12 | Design Primer |
52 | NC_008331 | (GTGA)3 | p4 | 128821 | 128832 | 12 | Design Primer |
53 | NC_008331 | (AGGCAG)3 | p6 | 138258 | 138275 | 18 | Design Primer |
54 | NC_008331 | (AAG)4 | p3 | 141072 | 141083 | 12 | Design Primer |
55 | NC_008331 | (TCATA)3 | p5 | 141644 | 141658 | 15 | Design Primer |
56 | NC_008331 | (GTC)4 | p3 | 142489 | 142500 | 12 | Design Primer |
57 | NC_008331 | (CT)6 | p2 | 143015 | 143026 | 12 | Design Primer |
58 | NC_008331 | (GATAG)5 | p5 | 147056 | 147080 | 25 | Design Primer |
59 | NC_008331 | (GTATA)3 | p5 | 152603 | 152617 | 15 | Design Primer |
60 | NC_008331 | (ACCCA)17 | p5 | 153001 | 153085 | 85 | Design Primer |
61 | NC_008331 | (GCCT)5 | p4 | 153595 | 153614 | 20 | Design Primer |
62 | NC_008331 | (ACTAT)9 | p5 | 154799 | 154843 | 45 | Design Primer |
63 | NC_008331 | (A)14 | p1 | 157689 | 157702 | 14 | Design Primer |
64 | NC_008331 | (TCCAA)4 | p5 | 158588 | 158607 | 20 | Design Primer |
65 | NC_008331 | (T)10 | p1 | 165671 | 165680 | 10 | Design Primer |
66 | NC_008331 | (T)12 | p1 | 167966 | 167977 | 12 | Design Primer |
67 | NC_008331 | (GAAAT)3 | p5 | 169518 | 169532 | 15 | Design Primer |
68 | NC_008331 | (CTAC)4 | p4 | 170043 | 170058 | 16 | Design Primer |
69 | NC_008331 | (TTATG)5 | p5 | 170214 | 170238 | 25 | Design Primer |
70 | NC_008331 | (CTCA)3 | p4 | 172754 | 172765 | 12 | Design Primer |
71 | NC_008331 | (AAAG)3 | p4 | 176815 | 176826 | 12 | Design Primer |
72 | NC_008331 | (TTGAA)3 | p5 | 177488 | 177502 | 15 | Design Primer |
73 | NC_008331 | (AAAG)3 | p4 | 188138 | 188149 | 12 | Design Primer |
74 | NC_008331 | (GA)6 | p2 | 190172 | 190183 | 12 | Design Primer |
75 | NC_008331 | (A)10 | p1 | 190391 | 190400 | 10 | Design Primer |
76 | NC_008331 | (CTTG)3 | p4 | 191857 | 191868 | 12 | Design Primer |
77 | NC_008331 | (TTACTT)3 | p6 | 192783 | 192800 | 18 | Design Primer |
78 | NC_008331 | (TTTAC)3 | p5 | 193077 | 193091 | 15 | Design Primer |
79 | NC_008331 | (CTAAC)4 | p5 | 200277 | 200296 | 20 | Design Primer |
80 | NC_008331 | (TTTCC)7 | p5 | 203279 | 203313 | 35 | Design Primer |
81 | NC_008331 | (TATGGT)5 | p6 | 204894 | 204923 | 30 | Design Primer |
82 | NC_008331 | (A)10 | p1 | 206901 | 206910 | 10 | Design Primer |
83 | NC_008331 | (TGCCAT)7 | p6 | 208440 | 208481 | 42 | Design Primer |
84 | NC_008331 | (AGCC)3 | p4 | 209289 | 209300 | 12 | Design Primer |
85 | NC_008331 | (AAGA)3 | p4 | 212341 | 212352 | 12 | Design Primer |
86 | NC_008331 | (ATGGAA)3 | p6 | 213605 | 213622 | 18 | Design Primer |
87 | NC_008331 | (ATACA)3 | p5 | 213866 | 213880 | 15 | Design Primer |
88 | NC_008331 | (TACTA)7 | p5 | 214077 | 214111 | 35 | Design Primer |
89 | NC_008331 | (A)10 | p1 | 215005 | 215014 | 10 | Design Primer |
90 | NC_008331 | (CT)6 | p2 | 217842 | 217853 | 12 | Design Primer |
91 | NC_008331 | (CCTAT)26 | p5 | 218199 | 218328 | 130 | Design Primer |
92 | NC_008331 | (AGGA)3 | p4 | 219969 | 219980 | 12 | Design Primer |
93 | NC_008331 | (TACTT)3 | p5 | 228828 | 228842 | 15 | Design Primer |
94 | NC_008331 | (GAA)4 | p3 | 234708 | 234719 | 12 | Design Primer |
95 | NC_008331 | (TCAAA)8 | p5 | 235424 | 235463 | 40 | Design Primer |
96 | NC_008331 | (ATC)4 | p3 | 241140 | 241151 | 12 | Design Primer |
97 | NC_008331 | (TACTT)6 | p5 | 249020 | 249049 | 30 | Design Primer |
98 | NC_008331 | (ATAGT)6ata(TATAG)3 | c | 249563 | 249610 | 48 | Design Primer |
99 | NC_008331 | (ACAG)3 | p4 | 251797 | 251808 | 12 | Design Primer |
100 | NC_008331 | (TCTA)4 | p4 | 253001 | 253016 | 16 | Design Primer |
101 | NC_008331 | (ATGC)3 | p4 | 253168 | 253179 | 12 | Design Primer |
102 | NC_008331 | (CTTT)3 | p4 | 256133 | 256144 | 12 | Design Primer |
103 | NC_008331 | (ATCAA)3 | p5 | 259625 | 259639 | 15 | Design Primer |
104 | NC_008331 | (GAAA)3 | p4 | 264404 | 264415 | 12 | Design Primer |
105 | NC_008331 | (ACA)4 | p3 | 265556 | 265567 | 12 | Design Primer |
106 | NC_008331 | (TTC)4 | p3 | 267683 | 267694 | 12 | Design Primer |
107 | NC_008331 | (GCAA)3 | p4 | 273386 | 273397 | 12 | Design Primer |
108 | NC_008331 | (CTTA)3 | p4 | 277385 | 277396 | 12 | Design Primer |
109 | NC_008331 | (TTGG)3 | p4 | 280816 | 280827 | 12 | Design Primer |
110 | NC_008331 | (ACCTT)3 | p5 | 281189 | 281203 | 15 | Design Primer |
111 | NC_008331 | (CCCCA)3 | p5 | 284551 | 284565 | 15 | Design Primer |
112 | NC_008331 | (GATT)3 | p4 | 285656 | 285667 | 12 | Design Primer |
113 | NC_008331 | (TGGGA)5 | p5 | 292536 | 292560 | 25 | Design Primer |
114 | NC_008331 | (T)10 | p1 | 298089 | 298098 | 10 | Design Primer |
115 | NC_008331 | (TCGC)3 | p4 | 303584 | 303595 | 12 | Design Primer |
116 | NC_008331 | (TTTCA)3 | p5 | 305041 | 305055 | 15 | Design Primer |
117 | NC_008331 | (TACTCA)3 | p6 | 308215 | 308232 | 18 | Design Primer |
118 | NC_008331 | (CTAAG)3 | p5 | 310710 | 310724 | 15 | Design Primer |
119 | NC_008331 | (ACTAT)3 | p5 | 312038 | 312052 | 15 | Design Primer |
120 | NC_008331 | (ATCTAA)3 | p6 | 312499 | 312516 | 18 | Design Primer |
121 | NC_008331 | (ATACA)4 | p5 | 313256 | 313275 | 20 | Design Primer |
122 | NC_008331 | (GGAT)3 | p4 | 315018 | 315029 | 12 | Design Primer |
123 | NC_008331 | (GGCT)3 | p4 | 317859 | 317870 | 12 | Design Primer |
124 | NC_008331 | (ACTAC)3 | p5 | 323191 | 323205 | 15 | Design Primer |
125 | NC_008331 | (AAAG)3 | p4 | 325399 | 325410 | 12 | Design Primer |
126 | NC_008331 | (TTGGA)3 | p5 | 326394 | 326408 | 15 | Design Primer |
127 | NC_008331 | (TGAG)3 | p4 | 328352 | 328363 | 12 | Design Primer |
128 | NC_008331 | (TATAG)3 | p5 | 343601 | 343615 | 15 | Design Primer |
129 | NC_008331 | (TAAA)3 | p4 | 345859 | 345870 | 12 | Design Primer |
130 | NC_008331 | (AGT)4 | p3 | 346520 | 346531 | 12 | Design Primer |
131 | NC_008331 | (CTTAAT)4 | p6 | 350160 | 350183 | 24 | Design Primer |
132 | NC_008331 | (AGA)4 | p3 | 353585 | 353596 | 12 | Design Primer |
133 | NC_008331 | (CAGT)3 | p4 | 355694 | 355705 | 12 | Design Primer |
134 | NC_008331 | (CTGT)3 | p4 | 356530 | 356541 | 12 | Design Primer |
135 | NC_008331 | (TTAGT)3 | p5 | 357004 | 357018 | 15 | Design Primer |
136 | NC_008331 | (ATG)4 | p3 | 357461 | 357472 | 12 | Design Primer |
137 | NC_008331 | (CAAG)3 | p4 | 362910 | 362921 | 12 | Design Primer |
138 | NC_008331 | (A)10 | p1 | 367278 | 367287 | 10 | Design Primer |
139 | NC_008331 | (AATG)3 | p4 | 368079 | 368090 | 12 | Design Primer |
140 | NC_008331 | (AAAG)3 | p4 | 369427 | 369438 | 12 | Design Primer |
141 | NC_008331 | (CTGA)3 | p4 | 371787 | 371798 | 12 | Design Primer |
142 | NC_008331 | (TAATA)3 | p5 | 375612 | 375626 | 15 | Design Primer |
143 | NC_008331 | (AAAGT)3 | p5 | 376246 | 376260 | 15 | Design Primer |
144 | NC_008331 | (TCAAA)3 | p5 | 383492 | 383506 | 15 | Design Primer |
145 | NC_008331 | (GAATGG)3 | p6 | 387544 | 387561 | 18 | Design Primer |
146 | NC_008331 | (TAAG)3 | p4 | 389118 | 389129 | 12 | Design Primer |
147 | NC_008331 | (TCTT)3acctggataatggaacatgctctagaagcccgcttttagaagctttatccgtcgttccagcccctcttgggat(AATGAA)3 | c | 391042 | 391144 | 103 | Design Primer |
148 | NC_008331 | (TATT)3 | p4 | 391260 | 391271 | 12 | Design Primer |
149 | NC_008331 | (TAAGT)3 | p5 | 394253 | 394267 | 15 | Design Primer |
150 | NC_008331 | (GACT)3 | p4 | 401736 | 401747 | 12 | Design Primer |
151 | NC_008331 | (CTAAT)3 | p5 | 402572 | 402586 | 15 | Design Primer |
152 | NC_008331 | (T)10 | p1 | 402781 | 402790 | 10 | Design Primer |
153 | NC_008331 | (TTAGT)4 | p5 | 410345 | 410364 | 20 | Design Primer |
154 | NC_008331 | (AAT)4ataaagatataatata(TAT)5 | c | 410651 | 410693 | 43 | Design Primer |
155 | NC_008331 | (A)10 | p1 | 412146 | 412155 | 10 | Design Primer |
156 | NC_008331 | (TATAG)3 | p5 | 413249 | 413263 | 15 | Design Primer |
157 | NC_008331 | (TATTA)3 | p5 | 414062 | 414076 | 15 | Design Primer |
158 | NC_008331 | (AACAA)4 | p5 | 419513 | 419532 | 20 | Design Primer |
159 | NC_008331 | (GGAT)3 | p4 | 421112 | 421123 | 12 | Design Primer |
160 | NC_008331 | (GGCT)3 | p4 | 423953 | 423964 | 12 | Design Primer |
161 | NC_008331 | (ACTAC)3 | p5 | 429285 | 429299 | 15 | Design Primer |
162 | NC_008331 | (AAAG)3 | p4 | 431493 | 431504 | 12 | Design Primer |
163 | NC_008331 | (TCTTT)3gggtgtagtcggacattccactttgttaag(TTCTT)3 | c | 437719 | 437778 | 60 | Design Primer |
164 | NC_008331 | (T)10agttcgcactgctctttctctctaaattgcatcaaagaaaat(AG)6 | c | 438548 | 438611 | 64 | Design Primer |
165 | NC_008331 | (GAGC)3 | p4 | 441310 | 441321 | 12 | Design Primer |
166 | NC_008331 | (TTAAG)3 | p5 | 448294 | 448308 | 15 | Design Primer |
167 | NC_008331 | (TTCTA)3 | p5 | 450098 | 450112 | 15 | Design Primer |
168 | NC_008331 | (TTCTAT)3 | p6 | 451696 | 451713 | 18 | Design Primer |
169 | NC_008331 | (TAGCC)3 | p5 | 451990 | 452004 | 15 | Design Primer |
170 | NC_008331 | (C)10 | p1 | 454068 | 454077 | 10 | Design Primer |
171 | NC_008331 | (AAAG)3 | p4 | 455986 | 455997 | 12 | Design Primer |
172 | NC_008331 | (TCTTAT)24 | p6 | 456309 | 456452 | 144 | Design Primer |
173 | NC_008331 | (GTATTC)3 | p6 | 464190 | 464207 | 18 | Design Primer |
174 | NC_008331 | (TACTA)12 | p5 | 464432 | 464491 | 60 | Design Primer |
175 | NC_008331 | (ATACA)3 | p5 | 469973 | 469987 | 15 | Design Primer |
176 | NC_008331 | (TAGC)3gtttttaa(GCTG)3 | c | 471154 | 471185 | 32 | Design Primer |
177 | NC_008331 | (G)12 | p1 | 472582 | 472593 | 12 | Design Primer |
178 | NC_008331 | (T)11 | p1 | 474420 | 474430 | 11 | Design Primer |
179 | NC_008331 | (AACG)3 | p4 | 478658 | 478669 | 12 | Design Primer |
180 | NC_008331 | (AACTT)3 | p5 | 480227 | 480241 | 15 | Design Primer |
181 | NC_008331 | (TTC)6 | p3 | 485162 | 485179 | 18 | Design Primer |
182 | NC_008331 | (GCTT)3 | p4 | 486203 | 486214 | 12 | Design Primer |
183 | NC_008331 | (TTCT)3 | p4 | 490332 | 490343 | 12 | Design Primer |
184 | NC_008331 | (TGTT)3 | p4 | 492803 | 492814 | 12 | Design Primer |
185 | NC_008331 | (ATAAGG)3 | p6 | 498891 | 498908 | 18 | Design Primer |
186 | NC_008331 | (CTCTCG)3 | p6 | 501044 | 501061 | 18 | Design Primer |
187 | NC_008331 | (ACT)4 | p3 | 503403 | 503414 | 12 | Design Primer |
188 | NC_008331 | (TATAG)4 | p5 | 503591 | 503610 | 20 | Design Primer |
189 | NC_008331 | (TAG)4 | p3 | 503740 | 503751 | 12 | Design Primer |
190 | NC_008331 | (TATCTA)19 | p6 | 504796 | 504909 | 114 | Design Primer |
191 | NC_008331 | (TAAGGA)3 | p6 | 505252 | 505269 | 18 | Design Primer |
192 | NC_008331 | (GATAAA)3 | p6 | 507913 | 507930 | 18 | Design Primer |
193 | NC_008331 | (GTAGA)3 | p5 | 508655 | 508669 | 15 | Design Primer |
194 | NC_008331 | (T)10 | p1 | 510987 | 510996 | 10 | Design Primer |
195 | NC_008331 | (CCGAT)7 | p5 | 515438 | 515472 | 35 | Design Primer |
196 | NC_008331 | (CTC)4gttgttgccgtggagaaagaccgtattcacgtctagttgaaatagatgcaagtcctcggccgc(TACTA)14 | c | 516030 | 516174 | 145 | Design Primer |
197 | NC_008331 | (CTTG)3 | p4 | 517175 | 517186 | 12 | Design Primer |
198 | NC_008331 | (ACTAA)3 | p5 | 518158 | 518172 | 15 | Design Primer |
199 | NC_008331 | (TACTA)5 | p5 | 518879 | 518903 | 25 | Design Primer |
200 | NC_008331 | (TTCTC)3 | p5 | 524803 | 524817 | 15 | Design Primer |
201 | NC_008331 | (TAGGGT)16 | p6 | 533518 | 533613 | 96 | Design Primer |
202 | NC_008331 | (TAA)4 | p3 | 533805 | 533816 | 12 | Design Primer |
203 | NC_008331 | (TACTA)4taacgcacacgtttcattattgttgctttactat(ATATG)3 | c | 534910 | 534978 | 69 | Design Primer |
204 | NC_008331 | (ACC)4 | p3 | 536587 | 536598 | 12 | Design Primer |
205 | NC_008331 | (AAGA)4 | p4 | 536724 | 536739 | 16 | Design Primer |
206 | NC_008331 | (TTCCTT)3 | p6 | 538205 | 538222 | 18 | Design Primer |
207 | NC_008331 | (TGGT)3 | p4 | 538404 | 538415 | 12 | Design Primer |
208 | NC_008331 | (AAGTA)4 | p5 | 538936 | 538955 | 20 | Design Primer |
209 | NC_008331 | (GCCC)3 | p4 | 542619 | 542630 | 12 | Design Primer |
210 | NC_008331 | (GAAAT)3 | p5 | 547652 | 547666 | 15 | Design Primer |
211 | NC_008331 | (ATTTC)3attt(AGTAG)7 | c | 548380 | 548433 | 54 | Design Primer |
212 | NC_008331 | (T)11 | p1 | 549297 | 549307 | 11 | Design Primer |
213 | NC_008331 | (GAA)4 | p3 | 552618 | 552629 | 12 | Design Primer |
214 | NC_008331 | (TCAAA)8 | p5 | 553334 | 553373 | 40 | Design Primer |
215 | NC_008331 | (ATC)4 | p3 | 559050 | 559061 | 12 | Design Primer |
216 | NC_008331 | (GTA)4 | p3 | 566911 | 566922 | 12 | Design Primer |