All Repeats of Chara vulgaris chloroplast
Click on Table Heading To Sort Results Accordingly
S.No. | Genome ID | SSR | SSR Type | Start | End | Tract Length | Primer Design |
---|---|---|---|---|---|---|---|
1 | NC_008097 | (AAT)4 | p3 | 3751 | 3762 | 12 | Design Primer |
2 | NC_008097 | (AG)9 | p2 | 4024 | 4041 | 18 | Design Primer |
3 | NC_008097 | (TCTT)3 | p4 | 4847 | 4858 | 12 | Design Primer |
4 | NC_008097 | (TTTA)3 | p4 | 5335 | 5346 | 12 | Design Primer |
5 | NC_008097 | (TAA)4 | p3 | 7313 | 7324 | 12 | Design Primer |
6 | NC_008097 | (TATT)3 | p4 | 7686 | 7697 | 12 | Design Primer |
7 | NC_008097 | (TAT)4 | p3 | 8348 | 8359 | 12 | Design Primer |
8 | NC_008097 | (TATAT)3 | p5 | 9416 | 9430 | 15 | Design Primer |
9 | NC_008097 | (ATAAA)3 | p5 | 9995 | 10009 | 15 | Design Primer |
10 | NC_008097 | (ATA)4 | p3 | 20660 | 20671 | 12 | Design Primer |
11 | NC_008097 | (ATA)5 | p3 | 22613 | 22627 | 15 | Design Primer |
12 | NC_008097 | (AT)6cgatatatagatatatagttcatatattcatatttatctattattgatatatcattcatatacatatacatattgg(AT)7ag(TA)7 | c | 24321 | 24438 | 118 | Design Primer |
13 | NC_008097 | (AT)6 | p2 | 25996 | 26007 | 12 | Design Primer |
14 | NC_008097 | (AATA)3 | p4 | 29838 | 29849 | 12 | Design Primer |
15 | NC_008097 | (TTA)6 | p3 | 30360 | 30377 | 18 | Design Primer |
16 | NC_008097 | (TATT)3 | p4 | 31589 | 31600 | 12 | Design Primer |
17 | NC_008097 | (ATAAT)3 | p5 | 34611 | 34625 | 15 | Design Primer |
18 | NC_008097 | (TTATA)3 | p5 | 34740 | 34754 | 15 | Design Primer |
19 | NC_008097 | (TA)6 | p2 | 36269 | 36280 | 12 | Design Primer |
20 | NC_008097 | (ATT)4 | p3 | 38402 | 38413 | 12 | Design Primer |
21 | NC_008097 | (TATT)3 | p4 | 39732 | 39743 | 12 | Design Primer |
22 | NC_008097 | (TATTA)3 | p5 | 40143 | 40157 | 15 | Design Primer |
23 | NC_008097 | (TA)6 | p2 | 45989 | 46000 | 12 | Design Primer |
24 | NC_008097 | (TA)9ttc(TA)14 | c | 47415 | 47463 | 49 | Design Primer |
25 | NC_008097 | (AATG)3 | p4 | 53353 | 53364 | 12 | Design Primer |
26 | NC_008097 | (TATATG)4taaatattaatagaattaatctatatataatatctgtcttgaatta(AT)7 | c | 55945 | 56028 | 84 | Design Primer |
27 | NC_008097 | (AT)11 | p2 | 58036 | 58057 | 22 | Design Primer |
28 | NC_008097 | (ATAA)3 | p4 | 59615 | 59626 | 12 | Design Primer |
29 | NC_008097 | (ATA)4 | p3 | 59820 | 59831 | 12 | Design Primer |
30 | NC_008097 | (AT)6 | p2 | 62469 | 62480 | 12 | Design Primer |
31 | NC_008097 | (TATT)3 | p4 | 64523 | 64534 | 12 | Design Primer |
32 | NC_008097 | (TTATAT)3atagtaatatgattataatattaatatgattataatatatattcttttttatttatcaattaaagaactacgaataaaaattac(AAAT)3 | c | 64982 | 65095 | 114 | Design Primer |
33 | NC_008097 | (ATAAT)3atagagataat(ATATA)3 | c | 71179 | 71219 | 41 | Design Primer |
34 | NC_008097 | (AT)10aaataca(AT)9 | c | 74691 | 74735 | 45 | Design Primer |
35 | NC_008097 | (TTATAA)3 | p6 | 78594 | 78611 | 18 | Design Primer |
36 | NC_008097 | (AATA)3 | p4 | 85029 | 85040 | 12 | Design Primer |
37 | NC_008097 | (TTAT)3 | p4 | 87443 | 87454 | 12 | Design Primer |
38 | NC_008097 | (TA)7 | p2 | 97134 | 97147 | 14 | Design Primer |
39 | NC_008097 | (AT)6 | p2 | 98229 | 98240 | 12 | Design Primer |
40 | NC_008097 | (TGTA)3 | p4 | 98483 | 98494 | 12 | Design Primer |
41 | NC_008097 | (TTAT)3 | p4 | 99775 | 99786 | 12 | Design Primer |
42 | NC_008097 | (TTAT)3 | p4 | 100364 | 100375 | 12 | Design Primer |
43 | NC_008097 | (ATA)4 | p3 | 103293 | 103304 | 12 | Design Primer |
44 | NC_008097 | (AATA)4 | p4 | 103859 | 103874 | 16 | Design Primer |
45 | NC_008097 | (AAAT)3 | p4 | 106997 | 107008 | 12 | Design Primer |
46 | NC_008097 | (ATATA)3atgcatacgacattatatac(AATA)3 | c | 117172 | 117218 | 47 | Design Primer |
47 | NC_008097 | (TAATA)3atacaaataatataataatacaata(AAT)4 | c | 118074 | 118125 | 52 | Design Primer |
48 | NC_008097 | (AATAT)3 | p5 | 119717 | 119731 | 15 | Design Primer |
49 | NC_008097 | (TA)6 | p2 | 120299 | 120310 | 12 | Design Primer |
50 | NC_008097 | (ATT)4 | p3 | 123143 | 123154 | 12 | Design Primer |
51 | NC_008097 | (ATA)4 | p3 | 124066 | 124077 | 12 | Design Primer |
52 | NC_008097 | (AT)9 | p2 | 125020 | 125037 | 18 | Design Primer |
53 | NC_008097 | (ATA)4taatcaatac(AATAT)3 | c | 126830 | 126866 | 37 | Design Primer |
54 | NC_008097 | (ATA)4ca(TAT)4 | c | 130913 | 130938 | 26 | Design Primer |
55 | NC_008097 | (AT)6 | p2 | 131280 | 131291 | 12 | Design Primer |
56 | NC_008097 | (ATA)4cttac(ATA)4 | c | 132233 | 132261 | 29 | Design Primer |
57 | NC_008097 | (TA)7 | p2 | 134825 | 134838 | 14 | Design Primer |
58 | NC_008097 | (TTA)4 | p3 | 140229 | 140240 | 12 | Design Primer |
59 | NC_008097 | (AGGT)3 | p4 | 143136 | 143147 | 12 | Design Primer |
60 | NC_008097 | (ATTT)3 | p4 | 146240 | 146251 | 12 | Design Primer |
61 | NC_008097 | (AATT)3 | p4 | 149148 | 149159 | 12 | Design Primer |
62 | NC_008097 | (ATA)5 | p3 | 149436 | 149450 | 15 | Design Primer |
63 | NC_008097 | (TTTA)3 | p4 | 153112 | 153123 | 12 | Design Primer |
64 | NC_008097 | (TTA)4aattgtattaattgtattattgttttctacaataatacaattaatacaatt(TAA)4 | c | 153297 | 153371 | 75 | Design Primer |
65 | NC_008097 | (ATATT)3 | p5 | 153530 | 153544 | 15 | Design Primer |
66 | NC_008097 | (AT)6 | p2 | 155368 | 155379 | 12 | Design Primer |
67 | NC_008097 | (TA)6 | p2 | 155746 | 155757 | 12 | Design Primer |
68 | NC_008097 | (AT)6 | p2 | 157850 | 157861 | 12 | Design Primer |
69 | NC_008097 | (AT)14 | p2 | 159829 | 159856 | 28 | Design Primer |
70 | NC_008097 | (TA)7gaatatatatagaaga(AT)6 | c | 159958 | 159999 | 42 | Design Primer |
71 | NC_008097 | (AAAT)3 | p4 | 160216 | 160227 | 12 | Design Primer |
72 | NC_008097 | (ATATA)3 | p5 | 162098 | 162112 | 15 | Design Primer |
73 | NC_008097 | (TATT)3 | p4 | 165604 | 165615 | 12 | Design Primer |
74 | NC_008097 | (ATATTA)3 | p6 | 165870 | 165887 | 18 | Design Primer |
75 | NC_008097 | (ATT)4 | p3 | 166134 | 166145 | 12 | Design Primer |
76 | NC_008097 | (ATAA)3 | p4 | 174496 | 174507 | 12 | Design Primer |
77 | NC_008097 | (CTAC)3 | p4 | 177600 | 177611 | 12 | Design Primer |
78 | NC_008097 | (TAA)4 | p3 | 180509 | 180520 | 12 | Design Primer |