All Repeats of Oryza sativa Indica Group mitochondrion
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | SSR | SSR Type | Start | End | Tract Length | Primer Design |
|---|---|---|---|---|---|---|---|
| 1 | NC_007886 | (T)10 | p1 | 11680 | 11689 | 10 | Design Primer |
| 2 | NC_007886 | (T)10 | p1 | 14823 | 14832 | 10 | Design Primer |
| 3 | NC_007886 | (GACT)3 | p4 | 15556 | 15567 | 12 | Design Primer |
| 4 | NC_007886 | (TAATT)3 | p5 | 19948 | 19962 | 15 | Design Primer |
| 5 | NC_007886 | (GAAA)3 | p4 | 24054 | 24065 | 12 | Design Primer |
| 6 | NC_007886 | (ACA)4 | p3 | 25478 | 25489 | 12 | Design Primer |
| 7 | NC_007886 | (GTAG)4 | p4 | 26757 | 26772 | 16 | Design Primer |
| 8 | NC_007886 | (AATA)3 | p4 | 31009 | 31020 | 12 | Design Primer |
| 9 | NC_007886 | (GCTT)3 | p4 | 34121 | 34132 | 12 | Design Primer |
| 10 | NC_007886 | (T)10 | p1 | 35058 | 35067 | 10 | Design Primer |
| 11 | NC_007886 | (GTAG)3 | p4 | 37819 | 37830 | 12 | Design Primer |
| 12 | NC_007886 | (ATA)4 | p3 | 40536 | 40547 | 12 | Design Primer |
| 13 | NC_007886 | (AAT)4 | p3 | 54053 | 54064 | 12 | Design Primer |
| 14 | NC_007886 | (CATC)3 | p4 | 65808 | 65819 | 12 | Design Primer |
| 15 | NC_007886 | (TACT)3 | p4 | 71674 | 71685 | 12 | Design Primer |
| 16 | NC_007886 | (ACGA)3 | p4 | 76481 | 76492 | 12 | Design Primer |
| 17 | NC_007886 | (A)10 | p1 | 80402 | 80411 | 10 | Design Primer |
| 18 | NC_007886 | (A)10 | p1 | 84603 | 84612 | 10 | Design Primer |
| 19 | NC_007886 | (AGA)4 | p3 | 89478 | 89489 | 12 | Design Primer |
| 20 | NC_007886 | (GCCG)3 | p4 | 90462 | 90473 | 12 | Design Primer |
| 21 | NC_007886 | (CAGT)3 | p4 | 91579 | 91590 | 12 | Design Primer |
| 22 | NC_007886 | (GAA)4 | p3 | 93497 | 93508 | 12 | Design Primer |
| 23 | NC_007886 | (T)10 | p1 | 106740 | 106749 | 10 | Design Primer |
| 24 | NC_007886 | (T)10 | p1 | 109883 | 109892 | 10 | Design Primer |
| 25 | NC_007886 | (GACT)3 | p4 | 110616 | 110627 | 12 | Design Primer |
| 26 | NC_007886 | (TAATT)3 | p5 | 115008 | 115022 | 15 | Design Primer |
| 27 | NC_007886 | (GAAA)3 | p4 | 119114 | 119125 | 12 | Design Primer |
| 28 | NC_007886 | (ACA)4 | p3 | 120538 | 120549 | 12 | Design Primer |
| 29 | NC_007886 | (GTAG)4 | p4 | 121817 | 121832 | 16 | Design Primer |
| 30 | NC_007886 | (AATA)3 | p4 | 126069 | 126080 | 12 | Design Primer |
| 31 | NC_007886 | (GCTT)3 | p4 | 129181 | 129192 | 12 | Design Primer |
| 32 | NC_007886 | (T)10 | p1 | 130118 | 130127 | 10 | Design Primer |
| 33 | NC_007886 | (GTAG)3 | p4 | 132879 | 132890 | 12 | Design Primer |
| 34 | NC_007886 | (ATA)4 | p3 | 135596 | 135607 | 12 | Design Primer |
| 35 | NC_007886 | (CT)6 | p2 | 151034 | 151045 | 12 | Design Primer |
| 36 | NC_007886 | (GAGC)3 | p4 | 156563 | 156574 | 12 | Design Primer |
| 37 | NC_007886 | (ATAG)3 | p4 | 159228 | 159239 | 12 | Design Primer |
| 38 | NC_007886 | (CATT)3 | p4 | 173965 | 173976 | 12 | Design Primer |
| 39 | NC_007886 | (AAAG)3 | p4 | 178010 | 178021 | 12 | Design Primer |
| 40 | NC_007886 | (CAATT)3 | p5 | 179903 | 179917 | 15 | Design Primer |
| 41 | NC_007886 | (AAATAA)3 | p6 | 182901 | 182918 | 18 | Design Primer |
| 42 | NC_007886 | (T)12 | p1 | 186158 | 186169 | 12 | Design Primer |
| 43 | NC_007886 | (AGT)4 | p3 | 188543 | 188554 | 12 | Design Primer |
| 44 | NC_007886 | (CTTG)3 | p4 | 189723 | 189734 | 12 | Design Primer |
| 45 | NC_007886 | (GAAA)3 | p4 | 195473 | 195484 | 12 | Design Primer |
| 46 | NC_007886 | (CTTC)3 | p4 | 196021 | 196032 | 12 | Design Primer |
| 47 | NC_007886 | (AT)6 | p2 | 197600 | 197611 | 12 | Design Primer |
| 48 | NC_007886 | (G)12 | p1 | 200489 | 200500 | 12 | Design Primer |
| 49 | NC_007886 | (T)10 | p1 | 214397 | 214406 | 10 | Design Primer |
| 50 | NC_007886 | (TCGC)3 | p4 | 215485 | 215496 | 12 | Design Primer |
| 51 | NC_007886 | (AG)6atggcgatggcag(TC)6 | c | 223603 | 223639 | 37 | Design Primer |
| 52 | NC_007886 | (AAAG)3 | p4 | 228177 | 228188 | 12 | Design Primer |
| 53 | NC_007886 | (AGAA)3aatgttaaacatggttttaaaccattttaacggtaaatcgcacaggtt(CAA)4 | c | 228653 | 228724 | 72 | Design Primer |
| 54 | NC_007886 | (TTTG)3 | p4 | 234923 | 234934 | 12 | Design Primer |
| 55 | NC_007886 | (T)10 | p1 | 237951 | 237960 | 10 | Design Primer |
| 56 | NC_007886 | (AAAGG)3 | p5 | 248604 | 248618 | 15 | Design Primer |
| 57 | NC_007886 | (TAG)4 | p3 | 249367 | 249378 | 12 | Design Primer |
| 58 | NC_007886 | (A)10 | p1 | 252338 | 252347 | 10 | Design Primer |
| 59 | NC_007886 | (CTC)4 | p3 | 255907 | 255918 | 12 | Design Primer |
| 60 | NC_007886 | (GACT)3 | p4 | 272245 | 272256 | 12 | Design Primer |
| 61 | NC_007886 | (TTA)4 | p3 | 273431 | 273442 | 12 | Design Primer |
| 62 | NC_007886 | (TCGC)3 | p4 | 274605 | 274616 | 12 | Design Primer |
| 63 | NC_007886 | (AG)6atggcgatggcag(TC)6 | c | 282723 | 282759 | 37 | Design Primer |
| 64 | NC_007886 | (ACTT)3 | p4 | 287678 | 287689 | 12 | Design Primer |
| 65 | NC_007886 | (ATT)4 | p3 | 290401 | 290412 | 12 | Design Primer |
| 66 | NC_007886 | (ATCCA)3 | p5 | 312976 | 312990 | 15 | Design Primer |
| 67 | NC_007886 | (GGAA)3aggt(AAAG)3 | c | 313762 | 313789 | 28 | Design Primer |
| 68 | NC_007886 | (C)10tttcctttgaccaacgggtcctcgaacccatgggggttatgaa(TCAT)3 | c | 316370 | 316434 | 65 | Design Primer |
| 69 | NC_007886 | (TTCT)3 | p4 | 318793 | 318804 | 12 | Design Primer |
| 70 | NC_007886 | (A)10 | p1 | 321756 | 321765 | 10 | Design Primer |
| 71 | NC_007886 | (T)13 | p1 | 322413 | 322425 | 13 | Design Primer |
| 72 | NC_007886 | (TTG)4cgagccgggctcgaactgacgaggagagtggagaggaatac(AGT)4 | c | 348251 | 348315 | 65 | Design Primer |
| 73 | NC_007886 | (TAT)4 | p3 | 349211 | 349222 | 12 | Design Primer |
| 74 | NC_007886 | (GGAA)3 | p4 | 356573 | 356584 | 12 | Design Primer |
| 75 | NC_007886 | (CGGGC)3 | p5 | 366534 | 366548 | 15 | Design Primer |
| 76 | NC_007886 | (G)11 | p1 | 366817 | 366827 | 11 | Design Primer |
| 77 | NC_007886 | (AAGA)3 | p4 | 372925 | 372936 | 12 | Design Primer |
| 78 | NC_007886 | (AAG)4 | p3 | 390764 | 390775 | 12 | Design Primer |
| 79 | NC_007886 | (GCCC)3 | p4 | 405788 | 405799 | 12 | Design Primer |
| 80 | NC_007886 | (AG)6atggcgatggcag(TC)6 | c | 413679 | 413715 | 37 | Design Primer |
| 81 | NC_007886 | (TAGAA)3 | p5 | 418625 | 418639 | 15 | Design Primer |
| 82 | NC_007886 | (TTG)4cgagccgggctcgaactgacgaggagagtggagaggaatac(AGT)4 | c | 429364 | 429428 | 65 | Design Primer |
| 83 | NC_007886 | (TAT)4 | p3 | 430324 | 430335 | 12 | Design Primer |
| 84 | NC_007886 | (GGAA)3 | p4 | 437686 | 437697 | 12 | Design Primer |
| 85 | NC_007886 | (CGGGC)3 | p5 | 447647 | 447661 | 15 | Design Primer |
| 86 | NC_007886 | (G)11 | p1 | 447930 | 447940 | 11 | Design Primer |
| 87 | NC_007886 | (AAGA)3 | p4 | 454038 | 454049 | 12 | Design Primer |
| 88 | NC_007886 | (CT)6 | p2 | 474054 | 474065 | 12 | Design Primer |
| 89 | NC_007886 | (GAGC)3 | p4 | 479583 | 479594 | 12 | Design Primer |
| 90 | NC_007886 | (ATAG)3 | p4 | 482248 | 482259 | 12 | Design Primer |