All Repeats of Moniliophthora perniciosa mitochondrion
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | SSR | SSR Type | Start | End | Tract Length | Primer Design |
|---|---|---|---|---|---|---|---|
| 1 | NC_005927 | (AAG)4cagggaagctg(CTT)4 | c | 13 | 47 | 35 | Design Primer |
| 2 | NC_005927 | (AAGGA)3 | p5 | 931 | 945 | 15 | Design Primer |
| 3 | NC_005927 | (A)13 | p1 | 1147 | 1159 | 13 | Design Primer |
| 4 | NC_005927 | (A)11 | p1 | 4576 | 4586 | 11 | Design Primer |
| 5 | NC_005927 | (AAG)4 | p3 | 5062 | 5073 | 12 | Design Primer |
| 6 | NC_005927 | (T)12 | p1 | 6332 | 6343 | 12 | Design Primer |
| 7 | NC_005927 | (TAAGA)4 | p5 | 6897 | 6916 | 20 | Design Primer |
| 8 | NC_005927 | (T)11 | p1 | 7213 | 7223 | 11 | Design Primer |
| 9 | NC_005927 | (TAAGA)3gcaaggaa(AAG)4 | c | 7768 | 7802 | 35 | Design Primer |
| 10 | NC_005927 | (A)10taaaaattaaaaaaaaataaaaaaattaaaagtagaataatttattaaaaaaaattatttttaaattaaacactct(CTTTAG)4(ATTTAG)4 | c | 8285 | 8418 | 134 | Design Primer |
| 11 | NC_005927 | (TCTTA)5 | p5 | 9785 | 9809 | 25 | Design Primer |
| 12 | NC_005927 | (T)10ctctttaatgttaaggtatttaacatttatactttttaaaaatatatttaccttctctctttat(CTTTAG)5ctttatctttat(CTTTAG)3 | c | 10650 | 10783 | 134 | Design Primer |
| 13 | NC_005927 | (AGC)4 | p3 | 10956 | 10967 | 12 | Design Primer |
| 14 | NC_005927 | (CTT)4 | p3 | 11484 | 11495 | 12 | Design Primer |
| 15 | NC_005927 | (A)10 | p1 | 12161 | 12170 | 10 | Design Primer |
| 16 | NC_005927 | (TCCC)3 | p4 | 12344 | 12355 | 12 | Design Primer |
| 17 | NC_005927 | (CTT)6 | p3 | 13200 | 13217 | 18 | Design Primer |
| 18 | NC_005927 | (T)11 | p1 | 13371 | 13381 | 11 | Design Primer |
| 19 | NC_005927 | (A)10 | p1 | 13499 | 13508 | 10 | Design Primer |
| 20 | NC_005927 | (CTT)4 | p3 | 13851 | 13862 | 12 | Design Primer |
| 21 | NC_005927 | (GCT)4 | p3 | 14380 | 14391 | 12 | Design Primer |
| 22 | NC_005927 | (CTT)4 | p3 | 14922 | 14933 | 12 | Design Primer |
| 23 | NC_005927 | (GGA)4 | p3 | 15056 | 15067 | 12 | Design Primer |
| 24 | NC_005927 | (A)11 | p1 | 15176 | 15186 | 11 | Design Primer |
| 25 | NC_005927 | (A)10(AAAAG)8* | c* | 15957 | 16002 | 46 | Design Primer |
| 26 | NC_005927 | (TCTTA)13accgcagctcccctgctcttatcttaaccgctttgctgcttatgcttcttcttccttctgcttcgc(AAG)4 | c | 16933 | 17075 | 143 | Design Primer |
| 27 | NC_005927 | (TAAA)3 | p4 | 17671 | 17682 | 12 | Design Primer |
| 28 | NC_005927 | (A)10 | p1 | 19021 | 19030 | 10 | Design Primer |
| 29 | NC_005927 | (TTAT)3 | p4 | 22237 | 22248 | 12 | Design Primer |
| 30 | NC_005927 | (ATTA)3 | p4 | 24423 | 24434 | 12 | Design Primer |
| 31 | NC_005927 | (T)11 | p1 | 26076 | 26086 | 11 | Design Primer |
| 32 | NC_005927 | (TTAT)3 | p4 | 26436 | 26447 | 12 | Design Primer |
| 33 | NC_005927 | (TCTTA)3 | p5 | 26905 | 26919 | 15 | Design Primer |
| 34 | NC_005927 | (A)12tt(A)10 | c | 27603 | 27626 | 24 | Design Primer |
| 35 | NC_005927 | (AAAT)3 | p4 | 29595 | 29606 | 12 | Design Primer |
| 36 | NC_005927 | (TCTTA)7accgcccctcccttgcatttctgctgttccttcccttgctccgcttc(CCCT)3 | c | 30416 | 30509 | 94 | Design Primer |
| 37 | NC_005927 | (T)10 | p1 | 30949 | 30958 | 10 | Design Primer |
| 38 | NC_005927 | (A)12 | p1 | 32122 | 32133 | 12 | Design Primer |
| 39 | NC_005927 | (T)11 | p1 | 33516 | 33526 | 11 | Design Primer |
| 40 | NC_005927 | (ATTA)3 | p4 | 34074 | 34085 | 12 | Design Primer |
| 41 | NC_005927 | (TTA)4 | p3 | 36053 | 36064 | 12 | Design Primer |
| 42 | NC_005927 | (TAAGA)6 | p5 | 37345 | 37374 | 30 | Design Primer |
| 43 | NC_005927 | (A)11 | p1 | 38811 | 38821 | 11 | Design Primer |
| 44 | NC_005927 | (T)10aacgtaacaacttatcacattatttttcttattctttttttgttcttgttattgttcttgtttttgttcttg(T)14 | c | 39532 | 39627 | 96 | Design Primer |
| 45 | NC_005927 | (A)11 | p1 | 40058 | 40068 | 11 | Design Primer |
| 46 | NC_005927 | (T)12 | p1 | 40791 | 40802 | 12 | Design Primer |
| 47 | NC_005927 | (A)10 | p1 | 41577 | 41586 | 10 | Design Primer |
| 48 | NC_005927 | (A)10 | p1 | 41866 | 41875 | 10 | Design Primer |
| 49 | NC_005927 | (C)14 | p1 | 42700 | 42713 | 14 | Design Primer |
| 50 | NC_005927 | (A)10 | p1 | 43478 | 43487 | 10 | Design Primer |
| 51 | NC_005927 | (A)11 | p1 | 44348 | 44358 | 11 | Design Primer |
| 52 | NC_005927 | (TCC)4 | p3 | 44542 | 44553 | 12 | Design Primer |
| 53 | NC_005927 | (T)11 | p1 | 44670 | 44680 | 11 | Design Primer |
| 54 | NC_005927 | (TAA)4 | p3 | 45114 | 45125 | 12 | Design Primer |
| 55 | NC_005927 | (AAG)4gagcagcggt(TAAGA)3 | c | 45963 | 45999 | 37 | Design Primer |
| 56 | NC_005927 | (CTT)4 | p3 | 46490 | 46501 | 12 | Design Primer |
| 57 | NC_005927 | (T)11 | p1 | 47452 | 47462 | 11 | Design Primer |
| 58 | NC_005927 | (A)11 | p1 | 52236 | 52246 | 11 | Design Primer |
| 59 | NC_005927 | (A)10 | p1 | 52550 | 52559 | 10 | Design Primer |
| 60 | NC_005927 | (T)10 | p1 | 52697 | 52706 | 10 | Design Primer |
| 61 | NC_005927 | (A)11 | p1 | 53177 | 53187 | 11 | Design Primer |
| 62 | NC_005927 | (C)13 | p1 | 53386 | 53398 | 13 | Design Primer |
| 63 | NC_005927 | (T)11 | p1 | 53609 | 53619 | 11 | Design Primer |
| 64 | NC_005927 | (T)11acaacgctttcttctgctgttccttcacttgcctgctccctg(CTT)4ttccttgc(TCTTA)6 | c | 54467 | 54569 | 103 | Design Primer |
| 65 | NC_005927 | (CTT)4 | p3 | 57660 | 57671 | 12 | Design Primer |
| 66 | NC_005927 | (A)11 | p1 | 57856 | 57866 | 11 | Design Primer |
| 67 | NC_005927 | (T)11 | p1 | 58763 | 58773 | 11 | Design Primer |
| 68 | NC_005927 | (T)10 | p1 | 59079 | 59088 | 10 | Design Primer |
| 69 | NC_005927 | (CCCTT)3 | p5 | 59326 | 59340 | 15 | Design Primer |
| 70 | NC_005927 | (T)10 | p1 | 59766 | 59775 | 10 | Design Primer |
| 71 | NC_005927 | (T)10 | p1 | 61300 | 61309 | 10 | Design Primer |
| 72 | NC_005927 | (AGGG)3 | p4 | 62578 | 62589 | 12 | Design Primer |
| 73 | NC_005927 | (AATATA)3 | p6 | 64028 | 64045 | 18 | Design Primer |
| 74 | NC_005927 | (CCCT)3 | p4 | 64484 | 64495 | 12 | Design Primer |
| 75 | NC_005927 | (G)12 | p1 | 64646 | 64657 | 12 | Design Primer |
| 76 | NC_005927 | (T)12 | p1 | 64967 | 64978 | 12 | Design Primer |
| 77 | NC_005927 | (TCTTA)3accgcagcaggatgaaaataaggagcagcttc(CCCT)3 | c | 65101 | 65159 | 59 | Design Primer |
| 78 | NC_005927 | (TAA)4 | p3 | 65833 | 65844 | 12 | Design Primer |
| 79 | NC_005927 | (CTTGCT)8 | p6 | 67881 | 67928 | 48 | Design Primer |
| 80 | NC_005927 | (AAGGG)7(AAGGA)5aactttaaaatctataatatttaacagtttatataaaatatattaaaagaaatataaaataagtaaataagcttttaggattaaa(T)10 | c | 68250 | 68404 | 155 | Design Primer |
| 81 | NC_005927 | (T)12aagtgtcaatgttatcattgtcgataatataattaagtgtttactatatataaagttat(A)10 | c | 68832 | 68912 | 81 | Design Primer |
| 82 | NC_005927 | (TCTTA)3 | p5 | 69433 | 69447 | 15 | Design Primer |
| 83 | NC_005927 | (TTTA)3 | p4 | 70543 | 70554 | 12 | Design Primer |
| 84 | NC_005927 | (TTCCC)7ag(AGGGA)3 | c | 71645 | 71696 | 52 | Design Primer |
| 85 | NC_005927 | (C)11 | p1 | 72220 | 72230 | 11 | Design Primer |
| 86 | NC_005927 | (AAATA)3 | p5 | 72449 | 72463 | 15 | Design Primer |
| 87 | NC_005927 | (TAGG)3 | p4 | 73157 | 73168 | 12 | Design Primer |
| 88 | NC_005927 | (G)10 | p1 | 73498 | 73507 | 10 | Design Primer |
| 89 | NC_005927 | (TTTA)3 | p4 | 75932 | 75943 | 12 | Design Primer |
| 90 | NC_005927 | (A)13 | p1 | 76916 | 76928 | 13 | Design Primer |
| 91 | NC_005927 | (T)13aattcttgtataaaagaagcagaaatagaatt(A)11 | c | 80288 | 80343 | 56 | Design Primer |
| 92 | NC_005927 | (TAA)4 | p3 | 82008 | 82019 | 12 | Design Primer |
| 93 | NC_005927 | (C)10 | p1 | 84734 | 84743 | 10 | Design Primer |
| 94 | NC_005927 | (A)10 | p1 | 86072 | 86081 | 10 | Design Primer |
| 95 | NC_005927 | (A)13 | p1 | 88497 | 88509 | 13 | Design Primer |
| 96 | NC_005927 | (TCTTA)3 | p5 | 90917 | 90931 | 15 | Design Primer |
| 97 | NC_005927 | (A)11 | p1 | 91294 | 91304 | 11 | Design Primer |
| 98 | NC_005927 | (G)12 | p1 | 92282 | 92293 | 12 | Design Primer |
| 99 | NC_005927 | (A)10 | p1 | 95197 | 95206 | 10 | Design Primer |
| 100 | NC_005927 | (TCTTGC)7 | p6 | 96439 | 96480 | 42 | Design Primer |
| 101 | NC_005927 | (CTT)4 | p3 | 96907 | 96918 | 12 | Design Primer |
| 102 | NC_005927 | (T)12 | p1 | 98365 | 98376 | 12 | Design Primer |
| 103 | NC_005927 | (AAG)4 | p3 | 99529 | 99540 | 12 | Design Primer |
| 104 | NC_005927 | (T)11 | p1 | 100617 | 100627 | 11 | Design Primer |
| 105 | NC_005927 | (CTT)4 | p3 | 100936 | 100947 | 12 | Design Primer |
| 106 | NC_005927 | (A)10 | p1 | 102307 | 102316 | 10 | Design Primer |
| 107 | NC_005927 | (CTT)4ttcctttc(TCTTA)6 | c | 102686 | 102735 | 50 | Design Primer |
| 108 | NC_005927 | (A)11 | p1 | 103223 | 103233 | 11 | Design Primer |
| 109 | NC_005927 | (TTAG)3 | p4 | 104044 | 104055 | 12 | Design Primer |
| 110 | NC_005927 | (AATT)3tttaaaaatttactaccctttaaagatttttttactgaattagctata(CTT)4 | c | 104211 | 104282 | 72 | Design Primer |
| 111 | NC_005927 | (G)10 | p1 | 104645 | 104654 | 10 | Design Primer |
| 112 | NC_005927 | (A)11 | p1 | 104782 | 104792 | 11 | Design Primer |
| 113 | NC_005927 | (TCTTGC)4 | p6 | 105039 | 105062 | 24 | Design Primer |
| 114 | NC_005927 | (G)10tgctgcggttaagagcaagggaaggaagaaggagcatgcctgcgcagcccctg(CTT)4 | c | 105847 | 105921 | 75 | Design Primer |