All Repeats of Physcomitrella patens subsp. patens chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | SSR | SSR Type | Start | End | Tract Length | Primer Design |
|---|---|---|---|---|---|---|---|
| 1 | NC_005087 | (AAGT)3 | p4 | 822 | 833 | 12 | Design Primer |
| 2 | NC_005087 | (T)12 | p1 | 2753 | 2764 | 12 | Design Primer |
| 3 | NC_005087 | (AT)6 | p2 | 5872 | 5883 | 12 | Design Primer |
| 4 | NC_005087 | (ATTA)3gagtatttactttaaagtaaatactc(TAAT)3 | c | 6366 | 6415 | 50 | Design Primer |
| 5 | NC_005087 | (TTTA)3 | p4 | 7010 | 7021 | 12 | Design Primer |
| 6 | NC_005087 | (TA)6 | p2 | 8433 | 8444 | 12 | Design Primer |
| 7 | NC_005087 | (AATAA)3 | p5 | 8805 | 8819 | 15 | Design Primer |
| 8 | NC_005087 | (TAAA)3 | p4 | 8941 | 8952 | 12 | Design Primer |
| 9 | NC_005087 | (AT)6 | p2 | 12761 | 12772 | 12 | Design Primer |
| 10 | NC_005087 | (AT)8ttatatatttatttaattattaatgattaaaaaaataataatatttaaataaaaa(AT)8 | c | 14223 | 14309 | 87 | Design Primer |
| 11 | NC_005087 | (ATA)5 | p3 | 15486 | 15500 | 15 | Design Primer |
| 12 | NC_005087 | (AT)7 | p2 | 15906 | 15919 | 14 | Design Primer |
| 13 | NC_005087 | (TAT)4 | p3 | 16214 | 16225 | 12 | Design Primer |
| 14 | NC_005087 | (T)13 | p1 | 16954 | 16966 | 13 | Design Primer |
| 15 | NC_005087 | (CAAA)3 | p4 | 17822 | 17833 | 12 | Design Primer |
| 16 | NC_005087 | (CTAA)3 | p4 | 18000 | 18011 | 12 | Design Primer |
| 17 | NC_005087 | (A)14 | p1 | 18414 | 18427 | 14 | Design Primer |
| 18 | NC_005087 | (T)13 | p1 | 18754 | 18766 | 13 | Design Primer |
| 19 | NC_005087 | (A)12 | p1 | 18891 | 18902 | 12 | Design Primer |
| 20 | NC_005087 | (TTTAT)3 | p5 | 21770 | 21784 | 15 | Design Primer |
| 21 | NC_005087 | (T)13 | p1 | 22038 | 22050 | 13 | Design Primer |
| 22 | NC_005087 | (ATT)4tttgtattaagttatctttaaatttacagtttttttatatatagat(ATAA)3aatattc(AATT)3 | c | 29293 | 29381 | 89 | Design Primer |
| 23 | NC_005087 | (A)12 | p1 | 32408 | 32419 | 12 | Design Primer |
| 24 | NC_005087 | (TAT)4 | p3 | 32582 | 32593 | 12 | Design Primer |
| 25 | NC_005087 | (ATTT)3 | p4 | 33531 | 33542 | 12 | Design Primer |
| 26 | NC_005087 | (AATT)3 | p4 | 35262 | 35273 | 12 | Design Primer |
| 27 | NC_005087 | (AT)6gttttttttaagatagtcaatta(T)12 | c | 41197 | 41243 | 47 | Design Primer |
| 28 | NC_005087 | (ATTTT)3 | p5 | 41395 | 41409 | 15 | Design Primer |
| 29 | NC_005087 | (CTTTT)3 | p5 | 44699 | 44713 | 15 | Design Primer |
| 30 | NC_005087 | (A)13gataaaaaaaaatattagttttaattttttatc(T)15 | c | 45505 | 45565 | 61 | Design Primer |
| 31 | NC_005087 | (T)13aatctttcaaaatgattattaataatcattttgaaagatt(A)12 | c | 45846 | 45910 | 65 | Design Primer |
| 32 | NC_005087 | (TAAA)3 | p4 | 48443 | 48454 | 12 | Design Primer |
| 33 | NC_005087 | (T)14atagagaaaatttttattaattctagatatgataaattac(T)14 | c | 49571 | 49638 | 68 | Design Primer |
| 34 | NC_005087 | (TATTTT)3 | p6 | 50189 | 50206 | 18 | Design Primer |
| 35 | NC_005087 | (T)16 | p1 | 52245 | 52260 | 16 | Design Primer |
| 36 | NC_005087 | (TAA)4aaatttat(TTA)4 | c | 52963 | 52994 | 32 | Design Primer |
| 37 | NC_005087 | (TA)6 | p2 | 56927 | 56938 | 12 | Design Primer |
| 38 | NC_005087 | (A)13 | p1 | 57138 | 57150 | 13 | Design Primer |
| 39 | NC_005087 | (TCTAT)3 | p5 | 59951 | 59965 | 15 | Design Primer |
| 40 | NC_005087 | (A)12 | p1 | 60477 | 60488 | 12 | Design Primer |
| 41 | NC_005087 | (AT)6 | p2 | 61723 | 61734 | 12 | Design Primer |
| 42 | NC_005087 | (TATT)3 | p4 | 64157 | 64168 | 12 | Design Primer |
| 43 | NC_005087 | (TTTA)3 | p4 | 65662 | 65673 | 12 | Design Primer |
| 44 | NC_005087 | (TTTTG)3 | p5 | 68921 | 68935 | 15 | Design Primer |
| 45 | NC_005087 | (TTAA)3ttttttatttttgagtaatcttactttctttaaatgatatatttttttgcaaaaatacctccaaaattttttggaattattaagaaattatcttgttta(TATT)3 | c | 73648 | 73770 | 123 | Design Primer |
| 46 | NC_005087 | (T)16 | p1 | 77151 | 77166 | 16 | Design Primer |
| 47 | NC_005087 | (TTAT)3 | p4 | 78455 | 78466 | 12 | Design Primer |
| 48 | NC_005087 | (T)12 | p1 | 79351 | 79362 | 12 | Design Primer |
| 49 | NC_005087 | (AT)8 | p2 | 79722 | 79737 | 16 | Design Primer |
| 50 | NC_005087 | (T)12attttaaaagaaattattttattatgtgttattacactgc(T)13 | c | 81290 | 81354 | 65 | Design Primer |
| 51 | NC_005087 | (TA)6 | p2 | 83073 | 83084 | 12 | Design Primer |
| 52 | NC_005087 | (T)12 | p1 | 84665 | 84676 | 12 | Design Primer |
| 53 | NC_005087 | (ATTT)3 | p4 | 88840 | 88851 | 12 | Design Primer |
| 54 | NC_005087 | (AGGT)3 | p4 | 91617 | 91628 | 12 | Design Primer |
| 55 | NC_005087 | (T)12 | p1 | 93788 | 93799 | 12 | Design Primer |
| 56 | NC_005087 | (TTA)4 | p3 | 97163 | 97174 | 12 | Design Primer |
| 57 | NC_005087 | (ATAA)3 | p4 | 98708 | 98719 | 12 | Design Primer |
| 58 | NC_005087 | (TA)6 | p2 | 102349 | 102360 | 12 | Design Primer |
| 59 | NC_005087 | (TTA)4 | p3 | 105737 | 105748 | 12 | Design Primer |
| 60 | NC_005087 | (T)13 | p1 | 108103 | 108115 | 13 | Design Primer |
| 61 | NC_005087 | (ATT)4 | p3 | 109694 | 109705 | 12 | Design Primer |
| 62 | NC_005087 | (A)12 | p1 | 114303 | 114314 | 12 | Design Primer |
| 63 | NC_005087 | (CTAC)3 | p4 | 116472 | 116483 | 12 | Design Primer |
| 64 | NC_005087 | (AAAT)3 | p4 | 119251 | 119262 | 12 | Design Primer |