Tetra-nucleotide Imperfect Repeats of Lygodium japonicum chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_022136 | GATA | 3 | 873 | 883 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 53331028 |
| 2 | NC_022136 | CAAA | 3 | 2936 | 2946 | 11 | 75 % | 0 % | 0 % | 25 % | 9 % | 53331028 |
| 3 | NC_022136 | ATTA | 3 | 3853 | 3863 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 53331028 |
| 4 | NC_022136 | TTTC | 3 | 4124 | 4135 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 53331028 |
| 5 | NC_022136 | GAAA | 3 | 4811 | 4821 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 53331028 |
| 6 | NC_022136 | AAAG | 3 | 7530 | 7541 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 53331028 |
| 7 | NC_022136 | TCTA | 3 | 7659 | 7671 | 13 | 25 % | 50 % | 0 % | 25 % | 7 % | 53331028 |
| 8 | NC_022136 | TCTT | 3 | 8158 | 8168 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 53331028 |
| 9 | NC_022136 | AATG | 3 | 9136 | 9147 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 53331028 |
| 10 | NC_022136 | AAAT | 3 | 10442 | 10454 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 53331028 |
| 11 | NC_022136 | TTTC | 3 | 12595 | 12606 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 53331028 |
| 12 | NC_022136 | CTTT | 3 | 13907 | 13917 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 53331028 |
| 13 | NC_022136 | TTTC | 3 | 20164 | 20174 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 53331028 |
| 14 | NC_022136 | TCAA | 3 | 27430 | 27441 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 53331028 |
| 15 | NC_022136 | GATA | 3 | 31111 | 31122 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 53331028 |
| 16 | NC_022136 | AAGA | 3 | 32552 | 32562 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 53331028 |
| 17 | NC_022136 | TTCT | 3 | 37068 | 37078 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 53331028 |
| 18 | NC_022136 | GGAC | 3 | 37892 | 37903 | 12 | 25 % | 0 % | 50 % | 25 % | 8 % | 53331028 |
| 19 | NC_022136 | CTTT | 3 | 37935 | 37945 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 53331028 |
| 20 | NC_022136 | GATT | 3 | 43318 | 43329 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | 53331028 |
| 21 | NC_022136 | GTTT | 3 | 47595 | 47606 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | 53331028 |
| 22 | NC_022136 | TACT | 3 | 50585 | 50595 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 53331028 |
| 23 | NC_022136 | TTTC | 3 | 51456 | 51466 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 53331028 |
| 24 | NC_022136 | GAAA | 3 | 53912 | 53923 | 12 | 75 % | 0 % | 25 % | 0 % | 0 % | 53331028 |
| 25 | NC_022136 | TTTC | 3 | 53934 | 53945 | 12 | 0 % | 75 % | 0 % | 25 % | 0 % | 53331028 |
| 26 | NC_022136 | TTTA | 3 | 57762 | 57773 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | 53331028 |
| 27 | NC_022136 | ATAG | 3 | 58876 | 58887 | 12 | 50 % | 25 % | 25 % | 0 % | 0 % | 53331028 |
| 28 | NC_022136 | ATGT | 3 | 59205 | 59216 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | 53331028 |
| 29 | NC_022136 | TGGG | 3 | 59316 | 59327 | 12 | 0 % | 25 % | 75 % | 0 % | 8 % | 53331028 |
| 30 | NC_022136 | ATGA | 3 | 60483 | 60494 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 53331028 |
| 31 | NC_022136 | TTTC | 3 | 61761 | 61772 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 53331028 |
| 32 | NC_022136 | AGCA | 3 | 61789 | 61799 | 11 | 50 % | 0 % | 25 % | 25 % | 9 % | 53331028 |
| 33 | NC_022136 | TCTT | 3 | 63546 | 63557 | 12 | 0 % | 75 % | 0 % | 25 % | 0 % | 53331028 |
| 34 | NC_022136 | TTTA | 3 | 64780 | 64791 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 53331028 |
| 35 | NC_022136 | TAAA | 4 | 64874 | 64889 | 16 | 75 % | 25 % | 0 % | 0 % | 6 % | 53331028 |
| 36 | NC_022136 | ATTT | 3 | 64948 | 64959 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 53331028 |
| 37 | NC_022136 | GAAA | 3 | 65154 | 65166 | 13 | 75 % | 0 % | 25 % | 0 % | 7 % | 53331028 |
| 38 | NC_022136 | GAAA | 3 | 65550 | 65560 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 53331028 |
| 39 | NC_022136 | TTGG | 3 | 66159 | 66169 | 11 | 0 % | 50 % | 50 % | 0 % | 9 % | 53331028 |
| 40 | NC_022136 | GTTG | 4 | 67982 | 67996 | 15 | 0 % | 50 % | 50 % | 0 % | 6 % | 53331035 |
| 41 | NC_022136 | CTGG | 3 | 68598 | 68609 | 12 | 0 % | 25 % | 50 % | 25 % | 8 % | 53331035 |
| 42 | NC_022136 | TTTC | 3 | 69781 | 69791 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 53331035 |
| 43 | NC_022136 | GATC | 3 | 73660 | 73670 | 11 | 25 % | 25 % | 25 % | 25 % | 9 % | 53331035 |
| 44 | NC_022136 | CGAT | 3 | 77797 | 77811 | 15 | 25 % | 25 % | 25 % | 25 % | 6 % | 53331035 |
| 45 | NC_022136 | AGAA | 3 | 78314 | 78325 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 53331035 |
| 46 | NC_022136 | TTTC | 3 | 80347 | 80357 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 53331035 |
| 47 | NC_022136 | TAAA | 3 | 80987 | 80997 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 53331035 |
| 48 | NC_022136 | CAAT | 3 | 81894 | 81904 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 53331035 |
| 49 | NC_022136 | AATT | 3 | 82528 | 82539 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 53331035 |
| 50 | NC_022136 | GAAA | 3 | 87379 | 87390 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 53331035 |
| 51 | NC_022136 | TTTC | 3 | 89550 | 89561 | 12 | 0 % | 75 % | 0 % | 25 % | 0 % | 53331035 |
| 52 | NC_022136 | GATC | 3 | 89938 | 89950 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 53331035 |
| 53 | NC_022136 | CTAT | 3 | 99174 | 99185 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 53331035 |
| 54 | NC_022136 | CTTT | 3 | 100931 | 100942 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 53331035 |
| 55 | NC_022136 | ATTG | 3 | 104547 | 104557 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 53331035 |
| 56 | NC_022136 | AATC | 3 | 110081 | 110092 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 53331035 |
| 57 | NC_022136 | GAAA | 3 | 110541 | 110552 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 53331035 |
| 58 | NC_022136 | ATTC | 3 | 117728 | 117740 | 13 | 25 % | 50 % | 0 % | 25 % | 7 % | 53331035 |
| 59 | NC_022136 | TTAC | 3 | 119441 | 119452 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 53331035 |
| 60 | NC_022136 | AAAT | 3 | 123627 | 123638 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 53331035 |
| 61 | NC_022136 | ATAG | 3 | 129432 | 129447 | 16 | 50 % | 25 % | 25 % | 0 % | 0 % | 53331035 |
| 62 | NC_022136 | TATT | 3 | 129730 | 129740 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 53331035 |
| 63 | NC_022136 | CAAT | 3 | 138152 | 138162 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 53331035 |
| 64 | NC_022136 | ATAG | 3 | 143524 | 143535 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 53331035 |
| 65 | NC_022136 | GAGG | 3 | 151259 | 151270 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 53331028 |
| 66 | NC_022136 | AGGT | 3 | 151474 | 151485 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 53331028 |
| 67 | NC_022136 | GATC | 3 | 152759 | 152771 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 53331028 |
| 68 | NC_022136 | GAAA | 3 | 153148 | 153159 | 12 | 75 % | 0 % | 25 % | 0 % | 0 % | 53331028 |
| 69 | NC_022136 | AGAA | 3 | 155084 | 155094 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 53331028 |
| 70 | NC_022136 | TTTC | 3 | 155319 | 155330 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 53331028 |