Tetra-nucleotide Imperfect Repeats of Aegilops speltoides isolate SPE0661 chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_022135 | AAGT | 3 | 790 | 800 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 53331018 |
| 2 | NC_022135 | TTCT | 3 | 6867 | 6877 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 53331018 |
| 3 | NC_022135 | TTCT | 3 | 7754 | 7764 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 4 | NC_022135 | GAAA | 3 | 10118 | 10129 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 53331018 |
| 5 | NC_022135 | AAAT | 3 | 14326 | 14336 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 6 | NC_022135 | CTTT | 3 | 14886 | 14897 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 7 | NC_022135 | GTAT | 3 | 15644 | 15654 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | Non-Coding |
| 8 | NC_022135 | AAAT | 3 | 16608 | 16618 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 9 | NC_022135 | TTTC | 3 | 16951 | 16961 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 10 | NC_022135 | ATCA | 3 | 17495 | 17505 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | Non-Coding |
| 11 | NC_022135 | ATGA | 3 | 17861 | 17872 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 12 | NC_022135 | TTTC | 3 | 20257 | 20269 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | 53331019 |
| 13 | NC_022135 | AGAA | 3 | 24858 | 24869 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 53331019 |
| 14 | NC_022135 | TTCA | 3 | 27513 | 27523 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 53331019 |
| 15 | NC_022135 | TTAA | 3 | 29763 | 29774 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 16 | NC_022135 | AGAA | 3 | 30751 | 30761 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 17 | NC_022135 | ATTG | 3 | 32180 | 32191 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | Non-Coding |
| 18 | NC_022135 | CTTT | 3 | 32517 | 32527 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 19 | NC_022135 | ATTG | 3 | 38200 | 38210 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 53331020 |
| 20 | NC_022135 | AAGA | 3 | 39447 | 39458 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 53331020 |
| 21 | NC_022135 | GACT | 3 | 39486 | 39497 | 12 | 25 % | 25 % | 25 % | 25 % | 8 % | 53331020 |
| 22 | NC_022135 | AATG | 3 | 39846 | 39857 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 53331020 |
| 23 | NC_022135 | CTAG | 3 | 40390 | 40402 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 53331020 |
| 24 | NC_022135 | ATCA | 3 | 42495 | 42505 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 53331020 |
| 25 | NC_022135 | AGAA | 4 | 42654 | 42668 | 15 | 75 % | 0 % | 25 % | 0 % | 6 % | 53331020 |
| 26 | NC_022135 | TCCT | 3 | 42914 | 42925 | 12 | 0 % | 50 % | 0 % | 50 % | 0 % | 53331020 |
| 27 | NC_022135 | TTCA | 3 | 44188 | 44199 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 28 | NC_022135 | GAAA | 3 | 45033 | 45043 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 29 | NC_022135 | AAAT | 3 | 46287 | 46298 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 30 | NC_022135 | AGAA | 3 | 46486 | 46497 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 31 | NC_022135 | TTGA | 3 | 46808 | 46820 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | Non-Coding |
| 32 | NC_022135 | CAGA | 3 | 48623 | 48633 | 11 | 50 % | 0 % | 25 % | 25 % | 9 % | 53331020 |
| 33 | NC_022135 | AGAA | 3 | 50424 | 50434 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 34 | NC_022135 | AATT | 3 | 54110 | 54121 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 35 | NC_022135 | TGCA | 3 | 55671 | 55683 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 53331020 |
| 36 | NC_022135 | AATA | 3 | 56470 | 56481 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 37 | NC_022135 | ACTA | 3 | 58100 | 58110 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | Non-Coding |
| 38 | NC_022135 | TTCA | 3 | 63039 | 63050 | 12 | 25 % | 50 % | 0 % | 25 % | 0 % | Non-Coding |
| 39 | NC_022135 | AAAG | 3 | 63156 | 63166 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 40 | NC_022135 | TATT | 3 | 64049 | 64059 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 41 | NC_022135 | GAAA | 3 | 64373 | 64384 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 53331022 |
| 42 | NC_022135 | TAAA | 3 | 64596 | 64607 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 43 | NC_022135 | ATGT | 3 | 66498 | 66508 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 53331022 |
| 44 | NC_022135 | AGAA | 3 | 67359 | 67370 | 12 | 75 % | 0 % | 25 % | 0 % | 0 % | Non-Coding |
| 45 | NC_022135 | ACTT | 3 | 69627 | 69637 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 46 | NC_022135 | GAAA | 4 | 70738 | 70753 | 16 | 75 % | 0 % | 25 % | 0 % | 6 % | Non-Coding |
| 47 | NC_022135 | AAAG | 3 | 78047 | 78057 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 48 | NC_022135 | TTAT | 3 | 78830 | 78841 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 53331023 |
| 49 | NC_022135 | GAAA | 3 | 79882 | 79892 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 50 | NC_022135 | TTCT | 3 | 87812 | 87822 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 53331024 |
| 51 | NC_022135 | AAAC | 3 | 92691 | 92703 | 13 | 75 % | 0 % | 0 % | 25 % | 7 % | 53331024 |
| 52 | NC_022135 | ATCC | 3 | 92825 | 92836 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 53331024 |
| 53 | NC_022135 | ACGG | 3 | 95938 | 95949 | 12 | 25 % | 0 % | 50 % | 25 % | 8 % | Non-Coding |
| 54 | NC_022135 | AGGT | 3 | 96222 | 96233 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | Non-Coding |
| 55 | NC_022135 | AACG | 3 | 97547 | 97558 | 12 | 50 % | 0 % | 25 % | 25 % | 0 % | Non-Coding |
| 56 | NC_022135 | AAAG | 4 | 98870 | 98885 | 16 | 75 % | 0 % | 25 % | 0 % | 6 % | Non-Coding |
| 57 | NC_022135 | GAAT | 3 | 100486 | 100496 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 58 | NC_022135 | AAGG | 3 | 100498 | 100509 | 12 | 50 % | 0 % | 50 % | 0 % | 8 % | Non-Coding |
| 59 | NC_022135 | AAAG | 3 | 103990 | 104000 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 53331024 |
| 60 | NC_022135 | AGAA | 3 | 104756 | 104766 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 53331024 |
| 61 | NC_022135 | TTTA | 3 | 109060 | 109071 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 53331024 |