Tetra-nucleotide Imperfect Repeats of Aegilops tauschii chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_022133 | AAGT | 3 | 790 | 800 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 53331008 |
| 2 | NC_022133 | AAAT | 3 | 2604 | 2614 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 53331008 |
| 3 | NC_022133 | CATT | 3 | 3717 | 3728 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 4 | NC_022133 | TTCT | 3 | 6886 | 6896 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 53331008 |
| 5 | NC_022133 | CTTT | 3 | 7727 | 7738 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 6 | NC_022133 | GAAA | 3 | 10171 | 10182 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 53331009 |
| 7 | NC_022133 | AAAT | 3 | 16643 | 16653 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 8 | NC_022133 | TTTC | 3 | 16981 | 16991 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 9 | NC_022133 | ATCA | 3 | 17540 | 17550 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | Non-Coding |
| 10 | NC_022133 | ATGA | 3 | 17909 | 17920 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 11 | NC_022133 | TTTC | 3 | 20292 | 20304 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | 53331009 |
| 12 | NC_022133 | AAAC | 3 | 22436 | 22446 | 11 | 75 % | 0 % | 0 % | 25 % | 9 % | 53331009 |
| 13 | NC_022133 | AGAA | 3 | 24893 | 24904 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 53331009 |
| 14 | NC_022133 | TTCA | 3 | 27544 | 27554 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 53331009 |
| 15 | NC_022133 | AGAA | 3 | 30608 | 30618 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 16 | NC_022133 | ATTG | 3 | 32041 | 32052 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | Non-Coding |
| 17 | NC_022133 | CTTT | 3 | 32378 | 32388 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 18 | NC_022133 | ATTG | 3 | 38051 | 38061 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 53331010 |
| 19 | NC_022133 | AAGA | 3 | 39298 | 39309 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 53331010 |
| 20 | NC_022133 | GACT | 3 | 39337 | 39348 | 12 | 25 % | 25 % | 25 % | 25 % | 8 % | 53331010 |
| 21 | NC_022133 | AATG | 3 | 39697 | 39708 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 53331010 |
| 22 | NC_022133 | CTAG | 3 | 40241 | 40253 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 53331010 |
| 23 | NC_022133 | ATCA | 3 | 42332 | 42342 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 53331010 |
| 24 | NC_022133 | TCCT | 3 | 42741 | 42752 | 12 | 0 % | 50 % | 0 % | 50 % | 0 % | 53331010 |
| 25 | NC_022133 | TTCA | 3 | 44015 | 44026 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 26 | NC_022133 | GAAA | 3 | 44851 | 44861 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 27 | NC_022133 | AAAT | 3 | 46109 | 46120 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 28 | NC_022133 | AGAA | 3 | 46308 | 46319 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 29 | NC_022133 | TTGA | 3 | 46630 | 46642 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | Non-Coding |
| 30 | NC_022133 | CAGA | 3 | 48434 | 48444 | 11 | 50 % | 0 % | 25 % | 25 % | 9 % | 53331010 |
| 31 | NC_022133 | AGAA | 3 | 50236 | 50246 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 32 | NC_022133 | AATT | 3 | 53922 | 53933 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 33 | NC_022133 | TGCA | 3 | 55490 | 55502 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 53331011 |
| 34 | NC_022133 | AATA | 3 | 56286 | 56297 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 35 | NC_022133 | AAAG | 3 | 56419 | 56430 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 36 | NC_022133 | TTGT | 3 | 62072 | 62084 | 13 | 0 % | 75 % | 25 % | 0 % | 7 % | Non-Coding |
| 37 | NC_022133 | TTCA | 3 | 63350 | 63361 | 12 | 25 % | 50 % | 0 % | 25 % | 0 % | Non-Coding |
| 38 | NC_022133 | AAAG | 3 | 63467 | 63477 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 39 | NC_022133 | TATT | 3 | 64360 | 64370 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 40 | NC_022133 | GAAA | 3 | 64684 | 64695 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 53331012 |
| 41 | NC_022133 | TAAA | 3 | 64907 | 64918 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 42 | NC_022133 | ATGT | 3 | 66771 | 66781 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 53331012 |
| 43 | NC_022133 | AGAA | 3 | 67632 | 67643 | 12 | 75 % | 0 % | 25 % | 0 % | 0 % | 53331012 |
| 44 | NC_022133 | GAAA | 4 | 71011 | 71026 | 16 | 75 % | 0 % | 25 % | 0 % | 6 % | 53331012 |
| 45 | NC_022133 | TTAT | 3 | 79107 | 79118 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 53331012 |
| 46 | NC_022133 | TTCT | 3 | 88406 | 88416 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 53331012 |
| 47 | NC_022133 | AAAC | 3 | 93285 | 93297 | 13 | 75 % | 0 % | 0 % | 25 % | 7 % | 53331015 |
| 48 | NC_022133 | ATCC | 3 | 93419 | 93430 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 53331015 |
| 49 | NC_022133 | ACGG | 3 | 96532 | 96543 | 12 | 25 % | 0 % | 50 % | 25 % | 8 % | Non-Coding |
| 50 | NC_022133 | AGGT | 3 | 96816 | 96827 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | Non-Coding |
| 51 | NC_022133 | AACG | 3 | 98141 | 98152 | 12 | 50 % | 0 % | 25 % | 25 % | 0 % | Non-Coding |
| 52 | NC_022133 | AAAG | 4 | 99464 | 99479 | 16 | 75 % | 0 % | 25 % | 0 % | 6 % | Non-Coding |
| 53 | NC_022133 | GAAT | 3 | 101080 | 101090 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 54 | NC_022133 | AAGG | 3 | 101092 | 101103 | 12 | 50 % | 0 % | 50 % | 0 % | 8 % | Non-Coding |
| 55 | NC_022133 | AAAG | 3 | 104437 | 104447 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 53331015 |
| 56 | NC_022133 | AGAA | 3 | 105229 | 105239 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 53331015 |
| 57 | NC_022133 | TTTA | 3 | 109528 | 109539 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 53331015 |
| 58 | NC_022133 | AGAA | 3 | 111644 | 111654 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 53331015 |