Tetra-nucleotide Imperfect Repeats of Medicago truncatula cultivar Borung plastid
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| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_022100 | ATTA | 4 | 2668 | 2683 | 16 | 50 % | 50 % | 0 % | 0 % | 0 % | Non-Coding |
| 2 | NC_022100 | ATTT | 3 | 2846 | 2857 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 3 | NC_022100 | CTAT | 3 | 2950 | 2960 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 4 | NC_022100 | GAAA | 3 | 3009 | 3020 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 5 | NC_022100 | TTTA | 3 | 5012 | 5023 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 6 | NC_022100 | AATA | 5 | 5227 | 5245 | 19 | 75 % | 25 % | 0 % | 0 % | 10 % | 53330999 |
| 7 | NC_022100 | ATGA | 3 | 6987 | 6998 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 8 | NC_022100 | TATT | 3 | 8474 | 8485 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | Non-Coding |
| 9 | NC_022100 | AAAT | 3 | 9851 | 9862 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 53330999 |
| 10 | NC_022100 | TATT | 3 | 10774 | 10786 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | 53330999 |
| 11 | NC_022100 | ATTT | 3 | 12741 | 12752 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 53331000 |
| 12 | NC_022100 | ATTT | 4 | 13086 | 13101 | 16 | 25 % | 75 % | 0 % | 0 % | 6 % | Non-Coding |
| 13 | NC_022100 | GTTT | 3 | 13548 | 13559 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | 53331000 |
| 14 | NC_022100 | ATTT | 3 | 13600 | 13610 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 53331000 |
| 15 | NC_022100 | CTTT | 3 | 13781 | 13792 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 53331000 |
| 16 | NC_022100 | AAGA | 3 | 14962 | 14973 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 53331000 |
| 17 | NC_022100 | TATT | 4 | 18828 | 18842 | 15 | 25 % | 75 % | 0 % | 0 % | 6 % | Non-Coding |
| 18 | NC_022100 | TATT | 4 | 19115 | 19129 | 15 | 25 % | 75 % | 0 % | 0 % | 6 % | Non-Coding |
| 19 | NC_022100 | TTTA | 3 | 19252 | 19262 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 20 | NC_022100 | CTTA | 3 | 20928 | 20938 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 21 | NC_022100 | TCTA | 3 | 23848 | 23858 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 22 | NC_022100 | CCTT | 3 | 24994 | 25004 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | Non-Coding |
| 23 | NC_022100 | AACC | 3 | 25857 | 25868 | 12 | 50 % | 0 % | 0 % | 50 % | 8 % | Non-Coding |
| 24 | NC_022100 | TATT | 3 | 34671 | 34683 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | 53331000 |
| 25 | NC_022100 | ATCA | 3 | 35638 | 35650 | 13 | 50 % | 25 % | 0 % | 25 % | 7 % | 53331000 |
| 26 | NC_022100 | TTTC | 3 | 37009 | 37019 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 53331000 |
| 27 | NC_022100 | AAAG | 3 | 37267 | 37277 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 53331000 |
| 28 | NC_022100 | AAAG | 3 | 37315 | 37326 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 53331000 |
| 29 | NC_022100 | AAAG | 3 | 37360 | 37371 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 53331000 |
| 30 | NC_022100 | ATTG | 3 | 37970 | 37981 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | 53331000 |
| 31 | NC_022100 | ATTG | 3 | 38946 | 38956 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 53331000 |
| 32 | NC_022100 | ATTT | 3 | 39376 | 39387 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | 53331000 |
| 33 | NC_022100 | ATCA | 3 | 40394 | 40405 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 53331000 |
| 34 | NC_022100 | TTTA | 3 | 41570 | 41580 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 53331000 |
| 35 | NC_022100 | ATTG | 3 | 42918 | 42928 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 53331000 |
| 36 | NC_022100 | GAAA | 4 | 43380 | 43395 | 16 | 75 % | 0 % | 25 % | 0 % | 6 % | 53331000 |
| 37 | NC_022100 | GAAA | 3 | 44710 | 44721 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 53331000 |
| 38 | NC_022100 | ATTA | 3 | 45329 | 45341 | 13 | 50 % | 50 % | 0 % | 0 % | 7 % | 53331000 |
| 39 | NC_022100 | TCAT | 3 | 45560 | 45571 | 12 | 25 % | 50 % | 0 % | 25 % | 0 % | 53331000 |
| 40 | NC_022100 | TTTA | 3 | 54273 | 54284 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 53331000 |
| 41 | NC_022100 | TATT | 3 | 54289 | 54300 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 53331000 |
| 42 | NC_022100 | AGAT | 3 | 54382 | 54394 | 13 | 50 % | 25 % | 25 % | 0 % | 7 % | 53331000 |
| 43 | NC_022100 | AAAT | 3 | 56482 | 56493 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 53331000 |
| 44 | NC_022100 | GAAA | 4 | 57672 | 57687 | 16 | 75 % | 0 % | 25 % | 0 % | 6 % | Non-Coding |
| 45 | NC_022100 | TATT | 4 | 58343 | 58358 | 16 | 25 % | 75 % | 0 % | 0 % | 6 % | 53331002 |
| 46 | NC_022100 | ATTT | 3 | 61304 | 61315 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 47 | NC_022100 | CAAA | 3 | 64530 | 64541 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | Non-Coding |
| 48 | NC_022100 | TTCA | 3 | 64570 | 64581 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 53331003 |
| 49 | NC_022100 | ATTC | 3 | 72089 | 72099 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 50 | NC_022100 | AATT | 4 | 72556 | 72570 | 15 | 50 % | 50 % | 0 % | 0 % | 6 % | 53331004 |
| 51 | NC_022100 | CTGT | 3 | 73574 | 73585 | 12 | 0 % | 50 % | 25 % | 25 % | 8 % | 53331004 |
| 52 | NC_022100 | TTCA | 3 | 76296 | 76306 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 53 | NC_022100 | TGAA | 3 | 76879 | 76890 | 12 | 50 % | 25 % | 25 % | 0 % | 0 % | Non-Coding |
| 54 | NC_022100 | TAAT | 5 | 77086 | 77106 | 21 | 50 % | 50 % | 0 % | 0 % | 9 % | Non-Coding |
| 55 | NC_022100 | TCAA | 3 | 79340 | 79351 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 53331004 |
| 56 | NC_022100 | AATT | 3 | 80990 | 81000 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 53331004 |
| 57 | NC_022100 | GTTC | 4 | 81497 | 81512 | 16 | 0 % | 50 % | 25 % | 25 % | 6 % | 53331004 |
| 58 | NC_022100 | TACC | 3 | 85990 | 86001 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 53331004 |
| 59 | NC_022100 | CCTA | 3 | 87188 | 87198 | 11 | 25 % | 25 % | 0 % | 50 % | 9 % | 53331004 |
| 60 | NC_022100 | GATA | 3 | 89131 | 89141 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 53331004 |
| 61 | NC_022100 | CATT | 3 | 89507 | 89518 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 53331004 |
| 62 | NC_022100 | TCAT | 3 | 89581 | 89591 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 63 | NC_022100 | ATTT | 4 | 89936 | 89951 | 16 | 25 % | 75 % | 0 % | 0 % | 6 % | Non-Coding |
| 64 | NC_022100 | TTTG | 3 | 90551 | 90562 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | Non-Coding |
| 65 | NC_022100 | CTTT | 3 | 92519 | 92529 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 66 | NC_022100 | AAAG | 3 | 92985 | 92995 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 67 | NC_022100 | GATA | 3 | 95235 | 95246 | 12 | 50 % | 25 % | 25 % | 0 % | 0 % | Non-Coding |
| 68 | NC_022100 | GAAA | 3 | 97337 | 97348 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 53331005 |
| 69 | NC_022100 | GCTT | 3 | 97740 | 97750 | 11 | 0 % | 50 % | 25 % | 25 % | 9 % | 53331005 |
| 70 | NC_022100 | TAAA | 3 | 98489 | 98500 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 71 | NC_022100 | AATA | 3 | 101564 | 101574 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 53331005 |
| 72 | NC_022100 | AAGA | 3 | 103012 | 103023 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 53331005 |
| 73 | NC_022100 | CATA | 3 | 103914 | 103926 | 13 | 50 % | 25 % | 0 % | 25 % | 7 % | 53331005 |
| 74 | NC_022100 | TTTG | 3 | 105540 | 105551 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | Non-Coding |
| 75 | NC_022100 | TTCC | 3 | 106042 | 106053 | 12 | 0 % | 50 % | 0 % | 50 % | 8 % | 53331005 |
| 76 | NC_022100 | TATT | 4 | 106522 | 106537 | 16 | 25 % | 75 % | 0 % | 0 % | 6 % | 53331005 |
| 77 | NC_022100 | AATT | 3 | 108241 | 108252 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 53331005 |
| 78 | NC_022100 | TTAA | 3 | 109433 | 109444 | 12 | 50 % | 50 % | 0 % | 0 % | 0 % | Non-Coding |
| 79 | NC_022100 | AATA | 4 | 109590 | 109604 | 15 | 75 % | 25 % | 0 % | 0 % | 6 % | Non-Coding |
| 80 | NC_022100 | TAAA | 3 | 110047 | 110058 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 81 | NC_022100 | TATC | 3 | 113700 | 113710 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 82 | NC_022100 | TCTT | 3 | 113894 | 113904 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 83 | NC_022100 | ATTT | 3 | 117008 | 117018 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 84 | NC_022100 | TGCA | 3 | 118306 | 118318 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 53331006 |
| 85 | NC_022100 | GAAT | 3 | 119082 | 119093 | 12 | 50 % | 25 % | 25 % | 0 % | 0 % | Non-Coding |
| 86 | NC_022100 | CATC | 3 | 119508 | 119520 | 13 | 25 % | 25 % | 0 % | 50 % | 7 % | Non-Coding |
| 87 | NC_022100 | ATTT | 3 | 119736 | 119746 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 88 | NC_022100 | AATG | 3 | 121696 | 121706 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 53331006 |
| 89 | NC_022100 | AATT | 3 | 123484 | 123495 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 90 | NC_022100 | TTTC | 3 | 123519 | 123530 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |