Tri-nucleotide Imperfect Repeats of Medicago truncatula cultivar Jemalong 2HA plastid
Click on Table Heading To Sort Results Accordingly
S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_022099 | ATT | 4 | 919 | 930 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | 53330989 |
2 | NC_022099 | AAG | 4 | 1576 | 1587 | 12 | 66.67 % | 0 % | 33.33 % | 0 % | 8 % | 53330989 |
3 | NC_022099 | TTA | 4 | 2651 | 2661 | 11 | 33.33 % | 66.67 % | 0 % | 0 % | 9 % | Non-Coding |
4 | NC_022099 | TAA | 4 | 2745 | 2757 | 13 | 66.67 % | 33.33 % | 0 % | 0 % | 7 % | Non-Coding |
5 | NC_022099 | ATA | 4 | 2767 | 2779 | 13 | 66.67 % | 33.33 % | 0 % | 0 % | 7 % | Non-Coding |
6 | NC_022099 | GAA | 4 | 3726 | 3736 | 11 | 66.67 % | 0 % | 33.33 % | 0 % | 9 % | Non-Coding |
7 | NC_022099 | AAT | 4 | 8496 | 8507 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | Non-Coding |
8 | NC_022099 | TTC | 5 | 9474 | 9488 | 15 | 0 % | 66.67 % | 0 % | 33.33 % | 6 % | 53330990 |
9 | NC_022099 | TCT | 4 | 10137 | 10148 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 8 % | 53330990 |
10 | NC_022099 | TCT | 4 | 12927 | 12938 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 8 % | 53330990 |
11 | NC_022099 | TAT | 5 | 13116 | 13129 | 14 | 33.33 % | 66.67 % | 0 % | 0 % | 7 % | Non-Coding |
12 | NC_022099 | CTT | 4 | 14652 | 14663 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 8 % | 53330991 |
13 | NC_022099 | CTT | 4 | 17787 | 17798 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 8 % | 53330991 |
14 | NC_022099 | TAT | 4 | 28541 | 28554 | 14 | 33.33 % | 66.67 % | 0 % | 0 % | 7 % | Non-Coding |
15 | NC_022099 | AGA | 4 | 28906 | 28917 | 12 | 66.67 % | 0 % | 33.33 % | 0 % | 8 % | Non-Coding |
16 | NC_022099 | AAT | 5 | 28937 | 28951 | 15 | 66.67 % | 33.33 % | 0 % | 0 % | 6 % | Non-Coding |
17 | NC_022099 | TCT | 4 | 31536 | 31548 | 13 | 0 % | 66.67 % | 0 % | 33.33 % | 7 % | 53330991 |
18 | NC_022099 | ATC | 8 | 35068 | 35091 | 24 | 33.33 % | 33.33 % | 0 % | 33.33 % | 4 % | 53330991 |
19 | NC_022099 | ACC | 4 | 35815 | 35825 | 11 | 33.33 % | 0 % | 0 % | 66.67 % | 9 % | 53330991 |
20 | NC_022099 | AAG | 4 | 36076 | 36087 | 12 | 66.67 % | 0 % | 33.33 % | 0 % | 8 % | 53330991 |
21 | NC_022099 | CTT | 8 | 36973 | 36995 | 23 | 0 % | 66.67 % | 0 % | 33.33 % | 8 % | 53330991 |
22 | NC_022099 | CTT | 4 | 38250 | 38262 | 13 | 0 % | 66.67 % | 0 % | 33.33 % | 7 % | 53330991 |
23 | NC_022099 | ATC | 4 | 39505 | 39515 | 11 | 33.33 % | 33.33 % | 0 % | 33.33 % | 9 % | 53330991 |
24 | NC_022099 | TGG | 4 | 41272 | 41283 | 12 | 0 % | 33.33 % | 66.67 % | 0 % | 8 % | 53330991 |
25 | NC_022099 | GAA | 5 | 41343 | 41357 | 15 | 66.67 % | 0 % | 33.33 % | 0 % | 6 % | 53330991 |
26 | NC_022099 | TTA | 4 | 43556 | 43567 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | 53330991 |
27 | NC_022099 | TTG | 4 | 44786 | 44797 | 12 | 0 % | 66.67 % | 33.33 % | 0 % | 8 % | 53330991 |
28 | NC_022099 | ATA | 4 | 44896 | 44906 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | 53330991 |
29 | NC_022099 | ATG | 4 | 44909 | 44920 | 12 | 33.33 % | 33.33 % | 33.33 % | 0 % | 8 % | 53330991 |
30 | NC_022099 | ATA | 4 | 45304 | 45317 | 14 | 66.67 % | 33.33 % | 0 % | 0 % | 7 % | 53330991 |
31 | NC_022099 | TAT | 4 | 45615 | 45625 | 11 | 33.33 % | 66.67 % | 0 % | 0 % | 9 % | 53330991 |
32 | NC_022099 | AGA | 4 | 48196 | 48207 | 12 | 66.67 % | 0 % | 33.33 % | 0 % | 8 % | 53330991 |
33 | NC_022099 | CAA | 4 | 53142 | 53152 | 11 | 66.67 % | 0 % | 0 % | 33.33 % | 9 % | 53330991 |
34 | NC_022099 | ATT | 4 | 54814 | 54825 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | 53330991 |
35 | NC_022099 | ATT | 4 | 55110 | 55120 | 11 | 33.33 % | 66.67 % | 0 % | 0 % | 9 % | 53330991 |
36 | NC_022099 | TGA | 4 | 56266 | 56277 | 12 | 33.33 % | 33.33 % | 33.33 % | 0 % | 8 % | 53330991 |
37 | NC_022099 | ACT | 4 | 56542 | 56552 | 11 | 33.33 % | 33.33 % | 0 % | 33.33 % | 9 % | 53330991 |
38 | NC_022099 | TTC | 4 | 58177 | 58188 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 8 % | Non-Coding |
39 | NC_022099 | GTT | 4 | 58517 | 58527 | 11 | 0 % | 66.67 % | 33.33 % | 0 % | 9 % | 53330993 |
40 | NC_022099 | GAA | 4 | 59163 | 59174 | 12 | 66.67 % | 0 % | 33.33 % | 0 % | 8 % | Non-Coding |
41 | NC_022099 | ATA | 4 | 59801 | 59813 | 13 | 66.67 % | 33.33 % | 0 % | 0 % | 7 % | Non-Coding |
42 | NC_022099 | TTA | 5 | 59961 | 59974 | 14 | 33.33 % | 66.67 % | 0 % | 0 % | 7 % | Non-Coding |
43 | NC_022099 | TAA | 4 | 61290 | 61302 | 13 | 66.67 % | 33.33 % | 0 % | 0 % | 7 % | Non-Coding |
44 | NC_022099 | ATT | 4 | 62845 | 62856 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | Non-Coding |
45 | NC_022099 | ATT | 4 | 63730 | 63741 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | 53330994 |
46 | NC_022099 | ATA | 4 | 66894 | 66905 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | Non-Coding |
47 | NC_022099 | ATC | 4 | 68247 | 68258 | 12 | 33.33 % | 33.33 % | 0 % | 33.33 % | 0 % | 53330994 |
48 | NC_022099 | ATC | 5 | 68427 | 68441 | 15 | 33.33 % | 33.33 % | 0 % | 33.33 % | 6 % | 53330994 |
49 | NC_022099 | ATC | 4 | 68535 | 68546 | 12 | 33.33 % | 33.33 % | 0 % | 33.33 % | 8 % | 53330994 |
50 | NC_022099 | TCC | 4 | 68665 | 68676 | 12 | 0 % | 33.33 % | 0 % | 66.67 % | 8 % | 53330994 |
51 | NC_022099 | ATA | 4 | 69959 | 69969 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | Non-Coding |
52 | NC_022099 | ATA | 4 | 70010 | 70022 | 13 | 66.67 % | 33.33 % | 0 % | 0 % | 7 % | Non-Coding |
53 | NC_022099 | CAT | 4 | 70439 | 70449 | 11 | 33.33 % | 33.33 % | 0 % | 33.33 % | 9 % | Non-Coding |
54 | NC_022099 | TAA | 5 | 75724 | 75739 | 16 | 66.67 % | 33.33 % | 0 % | 0 % | 6 % | Non-Coding |
55 | NC_022099 | CAG | 4 | 76380 | 76391 | 12 | 33.33 % | 0 % | 33.33 % | 33.33 % | 8 % | 53330995 |
56 | NC_022099 | TAA | 4 | 76452 | 76462 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | Non-Coding |
57 | NC_022099 | TAG | 4 | 76711 | 76721 | 11 | 33.33 % | 33.33 % | 33.33 % | 0 % | 9 % | Non-Coding |
58 | NC_022099 | AAT | 4 | 80302 | 80313 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | 53330995 |
59 | NC_022099 | ATT | 5 | 80543 | 80558 | 16 | 33.33 % | 66.67 % | 0 % | 0 % | 6 % | 53330995 |
60 | NC_022099 | AAT | 4 | 89432 | 89443 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | 53330995 |
61 | NC_022099 | CAA | 4 | 89930 | 89940 | 11 | 66.67 % | 0 % | 0 % | 33.33 % | 9 % | Non-Coding |
62 | NC_022099 | TAG | 5 | 90012 | 90025 | 14 | 33.33 % | 33.33 % | 33.33 % | 0 % | 7 % | Non-Coding |
63 | NC_022099 | ATA | 5 | 90478 | 90492 | 15 | 66.67 % | 33.33 % | 0 % | 0 % | 6 % | Non-Coding |
64 | NC_022099 | GAG | 4 | 90765 | 90776 | 12 | 33.33 % | 0 % | 66.67 % | 0 % | 8 % | Non-Coding |
65 | NC_022099 | TAT | 4 | 91315 | 91326 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | Non-Coding |
66 | NC_022099 | TAT | 4 | 91346 | 91358 | 13 | 33.33 % | 66.67 % | 0 % | 0 % | 7 % | Non-Coding |
67 | NC_022099 | TAT | 4 | 91364 | 91376 | 13 | 33.33 % | 66.67 % | 0 % | 0 % | 7 % | Non-Coding |
68 | NC_022099 | TAT | 4 | 91380 | 91390 | 11 | 33.33 % | 66.67 % | 0 % | 0 % | 9 % | Non-Coding |
69 | NC_022099 | TAA | 4 | 91391 | 91401 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | Non-Coding |
70 | NC_022099 | AAT | 4 | 91749 | 91760 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | Non-Coding |
71 | NC_022099 | ATT | 4 | 99447 | 99458 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | Non-Coding |
72 | NC_022099 | AAG | 4 | 100143 | 100154 | 12 | 66.67 % | 0 % | 33.33 % | 0 % | 8 % | Non-Coding |
73 | NC_022099 | ATG | 4 | 102111 | 102121 | 11 | 33.33 % | 33.33 % | 33.33 % | 0 % | 9 % | 53330996 |
74 | NC_022099 | GCA | 4 | 104009 | 104020 | 12 | 33.33 % | 0 % | 33.33 % | 33.33 % | 8 % | 53330996 |
75 | NC_022099 | ATG | 4 | 104335 | 104345 | 11 | 33.33 % | 33.33 % | 33.33 % | 0 % | 9 % | 53330996 |
76 | NC_022099 | ATT | 4 | 108386 | 108397 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | Non-Coding |
77 | NC_022099 | ATA | 4 | 109597 | 109608 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | Non-Coding |
78 | NC_022099 | TAA | 4 | 113736 | 113747 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | Non-Coding |
79 | NC_022099 | GTT | 4 | 115200 | 115211 | 12 | 0 % | 66.67 % | 33.33 % | 0 % | 8 % | 53330997 |
80 | NC_022099 | ATA | 4 | 119272 | 119282 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | Non-Coding |
81 | NC_022099 | ATA | 4 | 120640 | 120651 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | 53330997 |
82 | NC_022099 | ATT | 4 | 121282 | 121292 | 11 | 33.33 % | 66.67 % | 0 % | 0 % | 9 % | 53330997 |