Tetra-nucleotide Imperfect Repeats of Secale cereale chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_021761 | AAGT | 3 | 774 | 784 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 52578219 |
| 2 | NC_021761 | TTTA | 3 | 4491 | 4502 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 3 | NC_021761 | TTCT | 3 | 6875 | 6885 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 52578219 |
| 4 | NC_021761 | CTTT | 3 | 7715 | 7726 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 5 | NC_021761 | TTCT | 3 | 7771 | 7781 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 6 | NC_021761 | TAAA | 3 | 11415 | 11425 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 7 | NC_021761 | CTTT | 3 | 14917 | 14928 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 8 | NC_021761 | AAAT | 3 | 16643 | 16653 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 9 | NC_021761 | TTTC | 3 | 16981 | 16991 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 10 | NC_021761 | ATCA | 3 | 17530 | 17540 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | Non-Coding |
| 11 | NC_021761 | ATGA | 3 | 17897 | 17908 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 12 | NC_021761 | TTTC | 3 | 20273 | 20285 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | 52578220 |
| 13 | NC_021761 | AGAA | 3 | 24883 | 24894 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 52578220 |
| 14 | NC_021761 | TTCA | 3 | 27538 | 27548 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 52578220 |
| 15 | NC_021761 | TTAA | 3 | 29788 | 29799 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 16 | NC_021761 | AGAA | 3 | 30774 | 30784 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 17 | NC_021761 | ATTG | 3 | 32206 | 32217 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | Non-Coding |
| 18 | NC_021761 | CTTT | 3 | 32544 | 32554 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 19 | NC_021761 | GAAA | 3 | 33827 | 33838 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 52578221 |
| 20 | NC_021761 | ATTG | 3 | 38223 | 38233 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 52578221 |
| 21 | NC_021761 | AAGA | 3 | 39470 | 39481 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 52578221 |
| 22 | NC_021761 | GACT | 3 | 39509 | 39520 | 12 | 25 % | 25 % | 25 % | 25 % | 8 % | 52578221 |
| 23 | NC_021761 | AATG | 3 | 39869 | 39880 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 52578221 |
| 24 | NC_021761 | CTAG | 3 | 40413 | 40425 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 52578221 |
| 25 | NC_021761 | ATCA | 3 | 42502 | 42512 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 52578221 |
| 26 | NC_021761 | AGAA | 4 | 42655 | 42669 | 15 | 75 % | 0 % | 25 % | 0 % | 6 % | 52578221 |
| 27 | NC_021761 | TCCT | 3 | 42915 | 42926 | 12 | 0 % | 50 % | 0 % | 50 % | 0 % | 52578221 |
| 28 | NC_021761 | TTCA | 3 | 44190 | 44201 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 29 | NC_021761 | GAAA | 3 | 45029 | 45039 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 30 | NC_021761 | AAAT | 3 | 46284 | 46295 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 31 | NC_021761 | TAAA | 3 | 46348 | 46358 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 32 | NC_021761 | AGAA | 3 | 46484 | 46495 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 33 | NC_021761 | TTGA | 3 | 46809 | 46821 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | Non-Coding |
| 34 | NC_021761 | CAGA | 3 | 48633 | 48643 | 11 | 50 % | 0 % | 25 % | 25 % | 9 % | 52578221 |
| 35 | NC_021761 | AGAA | 3 | 50434 | 50444 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 36 | NC_021761 | AATT | 3 | 54121 | 54132 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 37 | NC_021761 | TGCA | 3 | 55673 | 55685 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 52578222 |
| 38 | NC_021761 | AATA | 3 | 56481 | 56492 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 39 | NC_021761 | AAAG | 3 | 57375 | 57386 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 40 | NC_021761 | ACTA | 3 | 58887 | 58897 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | Non-Coding |
| 41 | NC_021761 | TTGT | 3 | 63007 | 63019 | 13 | 0 % | 75 % | 25 % | 0 % | 7 % | Non-Coding |
| 42 | NC_021761 | TTCA | 3 | 64285 | 64296 | 12 | 25 % | 50 % | 0 % | 25 % | 0 % | Non-Coding |
| 43 | NC_021761 | AAAG | 3 | 64402 | 64412 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 44 | NC_021761 | TATT | 3 | 65303 | 65313 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 45 | NC_021761 | GAAA | 3 | 65639 | 65650 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 52578223 |
| 46 | NC_021761 | TAAA | 3 | 65862 | 65873 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 47 | NC_021761 | ATGT | 3 | 67757 | 67767 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 52578223 |
| 48 | NC_021761 | AGAA | 3 | 68618 | 68629 | 12 | 75 % | 0 % | 25 % | 0 % | 0 % | 52578223 |
| 49 | NC_021761 | ACTT | 3 | 70904 | 70914 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 52578223 |
| 50 | NC_021761 | GAAA | 3 | 72018 | 72029 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 52578223 |
| 51 | NC_021761 | AAAG | 3 | 79322 | 79332 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 52578223 |
| 52 | NC_021761 | TTAT | 3 | 80105 | 80116 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 52578223 |
| 53 | NC_021761 | GAAA | 3 | 81188 | 81198 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 52578223 |
| 54 | NC_021761 | TTCT | 3 | 89123 | 89133 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 52578223 |
| 55 | NC_021761 | AAAC | 3 | 94020 | 94032 | 13 | 75 % | 0 % | 0 % | 25 % | 7 % | 52578226 |
| 56 | NC_021761 | ATCC | 3 | 94154 | 94165 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 52578226 |
| 57 | NC_021761 | ACGG | 3 | 97273 | 97284 | 12 | 25 % | 0 % | 50 % | 25 % | 8 % | Non-Coding |
| 58 | NC_021761 | AGGT | 3 | 97557 | 97568 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | Non-Coding |
| 59 | NC_021761 | AACG | 3 | 98882 | 98893 | 12 | 50 % | 0 % | 25 % | 25 % | 0 % | Non-Coding |
| 60 | NC_021761 | AAAG | 4 | 100205 | 100220 | 16 | 75 % | 0 % | 25 % | 0 % | 6 % | Non-Coding |
| 61 | NC_021761 | GAAT | 3 | 101819 | 101829 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 62 | NC_021761 | AAAT | 3 | 104498 | 104509 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 52578226 |
| 63 | NC_021761 | AAAG | 3 | 105188 | 105198 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 52578226 |
| 64 | NC_021761 | AGAA | 3 | 105953 | 105963 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 52578226 |
| 65 | NC_021761 | TTTA | 3 | 110260 | 110271 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 52578226 |
| 66 | NC_021761 | TCAA | 3 | 112602 | 112613 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 52578226 |